Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 SNORD118-201ENST00000363593 134 ntBASIC1.11□□□□□ -2.23
H3BM21 Y_RNA.613-201ENST00000410726 97 ntBASIC1.11□□□□□ -2.23
H3BM21 RNU6-1238P-201ENST00000517215 102 ntBASIC1.11□□□□□ -2.23
H3BM21 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
H3BM21 SNORA62.4-201ENST00000365504 151 ntBASIC1.1□□□□□ -2.23
H3BM21 MIR140-201ENST00000385282 100 ntBASIC1.1□□□□□ -2.23
H3BM21 uc_338.36-201ENST00000622331 158 ntBASIC1.1□□□□□ -2.23
H3BM21 MIR876-201ENST00000401147 81 ntBASIC1.09□□□□□ -2.23
H3BM21 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
H3BM21 AL353765.1-201ENST00000605514 183 ntBASIC1.09□□□□□ -2.23
H3BM21 MIR760-201ENST00000390220 80 ntBASIC1.08□□□□□ -2.24
H3BM21 MIR3925-201ENST00000584674 77 ntBASIC1.08□□□□□ -2.24
H3BM21 MIR6755-201ENST00000619993 66 ntBASIC1.08□□□□□ -2.24
H3BM21 MIR106A-201ENST00000384870 81 ntBASIC1.07□□□□□ -2.24
H3BM21 SNORA40.8-201ENST00000411034 126 ntBASIC1.07□□□□□ -2.24
H3BM21 RNU6-732P-201ENST00000516033 103 ntBASIC1.07□□□□□ -2.24
H3BM21 Y_RNA.699-201ENST00000516803 93 ntBASIC1.07□□□□□ -2.24
H3BM21 AL391099.1-201ENST00000624635 187 ntBASIC1.07□□□□□ -2.24
H3BM21 MIR520D-201ENST00000385002 87 ntBASIC1.06□□□□□ -2.24
H3BM21 MIR548Q-201ENST00000408404 100 ntBASIC1.06□□□□□ -2.24
H3BM21 RNU6-1133P-201ENST00000410963 100 ntBASIC1.06□□□□□ -2.24
H3BM21 SNORD71-201ENST00000411292 86 ntBASIC1.06□□□□□ -2.24
H3BM21 RNA5SP436-201ENST00000516020 115 ntBASIC1.06□□□□□ -2.24
H3BM21 SNORA27.2-201ENST00000363365 126 ntBASIC1.05□□□□□ -2.24
H3BM21 Y_RNA.374-201ENST00000365606 101 ntBASIC1.05□□□□□ -2.24
H3BM21 RNU4-54P-201ENST00000516428 129 ntBASIC1.05□□□□□ -2.24
H3BM21 RNU6-848P-201ENST00000515948 107 ntBASIC1.04□□□□□ -2.24
H3BM21 RNU6-617P-201ENST00000516147 107 ntBASIC1.04□□□□□ -2.24
H3BM21 RNU6-473P-201ENST00000516164 107 ntBASIC1.04□□□□□ -2.24
H3BM21 RNU6-1049P-201ENST00000516414 107 ntBASIC1.04□□□□□ -2.24
H3BM21 MIR4661-201ENST00000582720 75 ntBASIC1.04□□□□□ -2.24
H3BM21 RNA5SP98-201ENST00000363158 137 ntBASIC1.03□□□□□ -2.24
H3BM21 RNA5SP128-201ENST00000365305 116 ntBASIC1.02□□□□□ -2.25
H3BM21 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.02□□□□□ -2.25
H3BM21 SNORD114-21-201ENST00000606412 72 ntBASIC1.02□□□□□ -2.25
H3BM21 MIR499B-201ENST00000636498 73 ntBASIC1.02□□□□□ -2.25
H3BM21 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
H3BM21 RNU6-973P-201ENST00000364690 107 ntBASIC1.01□□□□□ -2.25
H3BM21 MIR518A1-201ENST00000385068 85 ntBASIC1.01□□□□□ -2.25
H3BM21 RNU6-300P-201ENST00000459080 104 ntBASIC1.01□□□□□ -2.25
H3BM21 RNU7-55P-201ENST00000459426 62 ntBASIC1.01□□□□□ -2.25
H3BM21 SCARNA11.2-201ENST00000517183 154 ntBASIC1.01□□□□□ -2.25
H3BM21 RNU6-361P-201ENST00000364454 107 ntBASIC1□□□□□ -2.25
H3BM21 RNU7-129P-201ENST00000516128 62 ntBASIC1□□□□□ -2.25
H3BM21 RNY1P9-201ENST00000532431 109 ntBASIC1□□□□□ -2.25
H3BM21 SNORD19-201ENST00000391191 68 ntBASIC0.99□□□□□ -2.25
H3BM21 MIR5000-201ENST00000577717 103 ntBASIC0.99□□□□□ -2.25
H3BM21 RN7SL793P-201ENST00000583259 296 ntBASIC0.99□□□□□ -2.25
H3BM21 MIR6857-201ENST00000613267 93 ntBASIC0.99□□□□□ -2.25
H3BM21 MIR202-201ENST00000362219 110 ntBASIC0.98□□□□□ -2.25
H3BM21 RNU4-38P-201ENST00000364472 129 ntBASIC0.98□□□□□ -2.25
H3BM21 RNA5SP169-201ENST00000517268 117 ntBASIC0.98□□□□□ -2.25
H3BM21 AC211469.2-201ENST00000605461 205 ntBASIC0.98□□□□□ -2.25
H3BM21 MIR373-201ENST00000362273 69 ntBASIC0.97□□□□□ -2.25
H3BM21 AC096531.1-201ENST00000419107 107 ntBASIC0.97□□□□□ -2.25
H3BM21 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
H3BM21 MIR532-201ENST00000385025 91 ntBASIC0.96□□□□□ -2.26
H3BM21 MIR5704-201ENST00000584029 77 ntBASIC0.96□□□□□ -2.26
H3BM21 RNY3P8-201ENST00000411366 126 ntBASIC0.95□□□□□ -2.26
H3BM21 RNU6-1233P-201ENST00000362922 102 ntBASIC0.94□□□□□ -2.26
H3BM21 MIR216A-201ENST00000385063 110 ntBASIC0.94□□□□□ -2.26
H3BM21 AC108740.1-201ENST00000498629 225 ntBASIC0.94□□□□□ -2.26
H3BM21 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
H3BM21 MIR124-2-201ENST00000385081 109 ntBASIC0.93□□□□□ -2.26
H3BM21 SNORA17.4-201ENST00000391287 132 ntBASIC0.93□□□□□ -2.26
H3BM21 MIR8068-201ENST00000618032 68 ntBASIC0.93□□□□□ -2.26
H3BM21 Y_RNA.30-201ENST00000362572 97 ntBASIC0.92□□□□□ -2.26
H3BM21 RNU6-900P-201ENST00000384498 102 ntBASIC0.92□□□□□ -2.26
H3BM21 MIR608-201ENST00000384820 100 ntBASIC0.92□□□□□ -2.26
H3BM21 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
H3BM21 CYP3A137P-201ENST00000562436 69 ntBASIC0.92□□□□□ -2.26
H3BM21 SNORA42.1-201ENST00000363515 137 ntBASIC0.91□□□□□ -2.26
H3BM21 RNU6-176P-201ENST00000517196 105 ntBASIC0.91□□□□□ -2.26
H3BM21 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
H3BM21 AL590095.2-201ENST00000604136 117 ntBASIC0.9□□□□□ -2.27
H3BM21 MIR3973-201ENST00000579824 107 ntBASIC0.89□□□□□ -2.27
H3BM21 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.89□□□□□ -2.27
H3BM21 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
H3BM21 RNU6-455P-201ENST00000384681 107 ntBASIC0.88□□□□□ -2.27
H3BM21 AP002795.1-201ENST00000534879 84 ntBASIC0.88□□□□□ -2.27
H3BM21 MIR6854-201ENST00000614935 69 ntBASIC0.88□□□□□ -2.27
H3BM21 uc_338.17-201ENST00000619633 179 ntBASIC0.87□□□□□ -2.27
H3BM21 PSMC1P5-201ENST00000512850 177 ntBASIC0.86□□□□□ -2.27
H3BM21 RNU6-863P-201ENST00000515989 104 ntBASIC0.86□□□□□ -2.27
H3BM21 RNU6-608P-201ENST00000383927 104 ntBASIC0.85□□□□□ -2.27
H3BM21 MIR4698-201ENST00000577795 80 ntBASIC0.85□□□□□ -2.27
H3BM21 MIR193B-201ENST00000384907 83 ntBASIC0.84□□□□□ -2.27
H3BM21 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
H3BM21 MIR6514-201ENST00000622549 70 ntBASIC0.83□□□□□ -2.28
H3BM21 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
H3BM21 MIR1273G-201ENST00000577677 100 ntBASIC0.82□□□□□ -2.28
H3BM21 MIR4714-201ENST00000580728 77 ntBASIC0.82□□□□□ -2.28
H3BM21 MIR5683-201ENST00000636514 76 ntBASIC0.82□□□□□ -2.28
H3BM21 SNORD60-201ENST00000383903 83 ntBASIC0.81□□□□□ -2.28
H3BM21 RNU6-110P-201ENST00000384508 104 ntBASIC0.81□□□□□ -2.28
H3BM21 RNA5SP457-201ENST00000363657 124 ntBASIC0.8□□□□□ -2.28
H3BM21 Y_RNA.178-201ENST00000363832 102 ntBASIC0.8□□□□□ -2.28
H3BM21 RNU6-901P-201ENST00000384593 106 ntBASIC0.8□□□□□ -2.28
H3BM21 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
H3BM21 RNU6-127P-201ENST00000390897 107 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 212.7 ms