Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 RNU6-1262P-201ENST00000516217 96 ntBASIC0.61□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 RNU6-1206P-201ENST00000516339 103 ntBASIC0.61□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 RN7SL793P-201ENST00000583259 296 ntBASIC0.61□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.6□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 RNU6-247P-201ENST00000362636 107 ntBASIC0.6□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.6□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 U7.5-201ENST00000517224 61 ntBASIC0.6□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 SNORD115-23-201ENST00000364461 82 ntBASIC0.59□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 RNU6-1267P-201ENST00000410747 107 ntBASIC0.59□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 MIR106A-201ENST00000384870 81 ntBASIC0.58□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 MIR548AA1-201ENST00000384971 97 ntBASIC0.58□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 RNU6-696P-201ENST00000390834 107 ntBASIC0.58□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 RNU7-160P-201ENST00000516660 62 ntBASIC0.58□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 Y_RNA.698-201ENST00000516798 118 ntBASIC0.58□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 MIR193B-201ENST00000384907 83 ntBASIC0.57□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 MIR876-201ENST00000401147 81 ntBASIC0.57□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 RNU6-1133P-201ENST00000410963 100 ntBASIC0.57□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 RNU6-945P-201ENST00000383947 107 ntBASIC0.56□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 MIR6888-201ENST00000621977 67 ntBASIC0.56□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 RNU6-986P-201ENST00000363133 102 ntBASIC0.55□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 RNA5SP98-201ENST00000363158 137 ntBASIC0.55□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 RNU6-828P-201ENST00000364876 107 ntBASIC0.55□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 RNU6-974P-201ENST00000384099 108 ntBASIC0.55□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 MIR936-201ENST00000401264 98 ntBASIC0.55□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 RNU6-848P-201ENST00000515948 107 ntBASIC0.55□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 RNU6-617P-201ENST00000516147 107 ntBASIC0.55□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 RNU6-473P-201ENST00000516164 107 ntBASIC0.55□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 RNU6-1049P-201ENST00000516414 107 ntBASIC0.55□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 MIR103A1-201ENST00000362165 78 ntBASIC0.54□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 Y_RNA.68-201ENST00000362881 102 ntBASIC0.54□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 SNORD44.1-201ENST00000363202 61 ntBASIC0.54□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 Y_RNA.115-201ENST00000363272 98 ntBASIC0.54□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 Y_RNA.139-201ENST00000363464 102 ntBASIC0.54□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 MIR643-201ENST00000385267 97 ntBASIC0.54□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 RNU6-1174P-201ENST00000517278 101 ntBASIC0.54□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 MIR1273G-201ENST00000577677 100 ntBASIC0.54□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 MIR4464-201ENST00000580818 92 ntBASIC0.54□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 AL391099.1-201ENST00000624635 187 ntBASIC0.54□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 RNA5SP62-201ENST00000363457 110 ntBASIC0.53□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 AC108740.1-201ENST00000498629 225 ntBASIC0.53□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 MIR5087-201ENST00000635826 76 ntBASIC0.53□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
C1QTNF3-AMACRE9PGA6 MIR125B1-201ENST00000385236 88 ntBASIC0.52□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 AL451105.1-201ENST00000450005 189 ntBASIC0.52□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 SNORD63.1-201ENST00000516178 80 ntBASIC0.52□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 AL445584.3-201ENST00000617173 78 ntBASIC0.52□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 RNA5SP499-201ENST00000363982 119 ntBASIC0.51□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 RNU6-127P-201ENST00000390897 107 ntBASIC0.51□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 SNORD57-201ENST00000448188 72 ntBASIC0.51□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 SNORA68.3-201ENST00000515906 83 ntBASIC0.51□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 MIR4711-201ENST00000578274 70 ntBASIC0.51□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 MIR5704-201ENST00000584029 77 ntBASIC0.51□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 SNORD63.2-201ENST00000516303 64 ntBASIC0.5□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 MIR548AL-201ENST00000578416 97 ntBASIC0.5□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 MIR6514-201ENST00000622549 70 ntBASIC0.5□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 RNU6-815P-201ENST00000384080 113 ntBASIC0.49□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 RNA5SP457-201ENST00000363657 124 ntBASIC0.48□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 SNORA62.4-201ENST00000365504 151 ntBASIC0.48□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 RNU6-455P-201ENST00000384681 107 ntBASIC0.48□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.48□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 RNU6-863P-201ENST00000515989 104 ntBASIC0.48□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 MIR8068-201ENST00000618032 68 ntBASIC0.48□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 SNORD114-23-201ENST00000363536 72 ntBASIC0.47□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 RNU6-973P-201ENST00000364690 107 ntBASIC0.47□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 MIR548Q-201ENST00000408404 100 ntBASIC0.47□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 RNA5SP193-201ENST00000410353 107 ntBASIC0.47□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 RNU7-55P-201ENST00000459426 62 ntBASIC0.47□□□□□ -2.33
C1QTNF3-AMACRE9PGA6 RNU6-1008P-201ENST00000384160 104 ntBASIC0.46□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 MIR124-2-201ENST00000385081 109 ntBASIC0.46□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 RNA5SP163-201ENST00000410304 99 ntBASIC0.46□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 RNA5SP330-201ENST00000517096 96 ntBASIC0.46□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 MIR3170-201ENST00000582699 77 ntBASIC0.46□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 MIR924-201ENST00000638017 53 ntBASIC0.46□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 RNA5SP257-201ENST00000363023 116 ntBASIC0.45□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 Y_RNA.433-201ENST00000384089 102 ntBASIC0.45□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 RNU6-1238P-201ENST00000517215 102 ntBASIC0.45□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 RNU6-900P-201ENST00000384498 102 ntBASIC0.44□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 RNU6-901P-201ENST00000384593 106 ntBASIC0.44□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 RNU6-1111P-201ENST00000391118 107 ntBASIC0.44□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 MIRLET7D-201ENST00000362263 87 ntBASIC0.43□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 SNORD45.2-201ENST00000363552 72 ntBASIC0.43□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 RNU6-1204P-201ENST00000363948 107 ntBASIC0.43□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 RNU6-724P-201ENST00000390958 105 ntBASIC0.43□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 RNU6-530P-201ENST00000391180 107 ntBASIC0.43□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 Y_RNA.613-201ENST00000410726 97 ntBASIC0.43□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 AC096531.1-201ENST00000419107 107 ntBASIC0.43□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 RNA5SP476-201ENST00000516613 103 ntBASIC0.43□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 MIR8087-201ENST00000612745 78 ntBASIC0.43□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 MTRNR2L9-201ENST00000622562 75 ntBASIC0.43□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 AC010487.4-201ENST00000637027 61 ntBASIC0.43□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 MIR29B1-201ENST00000385015 81 ntBASIC0.42□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 RNU6-721P-201ENST00000410155 105 ntBASIC0.42□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 HAR1A.1-201ENST00000459583 118 ntBASIC0.42□□□□□ -2.34
C1QTNF3-AMACRE9PGA6 RNU6-732P-201ENST00000516033 103 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms