Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 RNA5SP102-201ENST00000516865 106 ntBASIC1.44□□□□□ -2.18
PCDHGA4Q9Y5G9 AL353765.1-201ENST00000605514 183 ntBASIC1.44□□□□□ -2.18
PCDHGA4Q9Y5G9 SNORA25.18-201ENST00000607153 114 ntBASIC1.44□□□□□ -2.18
PCDHGA4Q9Y5G9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
PCDHGA4Q9Y5G9 RNU6-1204P-201ENST00000363948 107 ntBASIC1.43□□□□□ -2.18
PCDHGA4Q9Y5G9 SNORA36.2-201ENST00000384004 127 ntBASIC1.43□□□□□ -2.18
PCDHGA4Q9Y5G9 MIR1304-201ENST00000408243 91 ntBASIC1.43□□□□□ -2.18
PCDHGA4Q9Y5G9 MIR4452-201ENST00000583004 71 ntBASIC1.43□□□□□ -2.18
PCDHGA4Q9Y5G9 MIR4677-201ENST00000584153 80 ntBASIC1.43□□□□□ -2.18
PCDHGA4Q9Y5G9 RNU6-945P-201ENST00000383947 107 ntBASIC1.42□□□□□ -2.18
PCDHGA4Q9Y5G9 AC084368.1-201ENST00000620935 65 ntBASIC1.42□□□□□ -2.18
PCDHGA4Q9Y5G9 AC108676.2-201ENST00000605225 163 ntBASIC1.41□□□□□ -2.18
PCDHGA4Q9Y5G9 AL353770.2-201ENST00000620024 78 ntBASIC1.41□□□□□ -2.18
PCDHGA4Q9Y5G9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
PCDHGA4Q9Y5G9 SNORD45.2-201ENST00000363552 72 ntBASIC1.4□□□□□ -2.19
PCDHGA4Q9Y5G9 SNORD118-201ENST00000363593 134 ntBASIC1.4□□□□□ -2.19
PCDHGA4Q9Y5G9 Y_RNA.423-201ENST00000384057 113 ntBASIC1.4□□□□□ -2.19
PCDHGA4Q9Y5G9 MIR140-201ENST00000385282 100 ntBASIC1.4□□□□□ -2.19
PCDHGA4Q9Y5G9 ACA64.5-201ENST00000516207 127 ntBASIC1.39□□□□□ -2.19
PCDHGA4Q9Y5G9 RNU6-1232P-201ENST00000516299 86 ntBASIC1.39□□□□□ -2.19
PCDHGA4Q9Y5G9 MIR4432-201ENST00000581823 84 ntBASIC1.39□□□□□ -2.19
PCDHGA4Q9Y5G9 SNORD115-23-201ENST00000364461 82 ntBASIC1.38□□□□□ -2.19
PCDHGA4Q9Y5G9 RNU6-42P-201ENST00000384165 107 ntBASIC1.38□□□□□ -2.19
PCDHGA4Q9Y5G9 RNU6-1267P-201ENST00000410747 107 ntBASIC1.38□□□□□ -2.19
PCDHGA4Q9Y5G9 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.38□□□□□ -2.19
PCDHGA4Q9Y5G9 MIR6078-201ENST00000611069 100 ntBASIC1.38□□□□□ -2.19
PCDHGA4Q9Y5G9 MIR501-201ENST00000390204 84 ntBASIC1.37□□□□□ -2.19
PCDHGA4Q9Y5G9 SNORA40.8-201ENST00000411034 126 ntBASIC1.37□□□□□ -2.19
PCDHGA4Q9Y5G9 RNA5SP61-201ENST00000516453 100 ntBASIC1.37□□□□□ -2.19
PCDHGA4Q9Y5G9 SNORD114-22-201ENST00000365423 72 ntBASIC1.36□□□□□ -2.19
PCDHGA4Q9Y5G9 RNU6-848P-201ENST00000515948 107 ntBASIC1.36□□□□□ -2.19
PCDHGA4Q9Y5G9 RNU6-617P-201ENST00000516147 107 ntBASIC1.36□□□□□ -2.19
PCDHGA4Q9Y5G9 RNU6-473P-201ENST00000516164 107 ntBASIC1.36□□□□□ -2.19
PCDHGA4Q9Y5G9 RNA5SP220-201ENST00000516298 104 ntBASIC1.36□□□□□ -2.19
PCDHGA4Q9Y5G9 RNU6-1049P-201ENST00000516414 107 ntBASIC1.36□□□□□ -2.19
PCDHGA4Q9Y5G9 Y_RNA.139-201ENST00000363464 102 ntBASIC1.35□□□□□ -2.19
PCDHGA4Q9Y5G9 RN7SL660P-201ENST00000614852 299 ntBASIC1.35□□□□□ -2.19
PCDHGA4Q9Y5G9 MIR6734-201ENST00000621166 68 ntBASIC1.35□□□□□ -2.19
PCDHGA4Q9Y5G9 RNU6-822P-201ENST00000362707 106 ntBASIC1.34□□□□□ -2.19
PCDHGA4Q9Y5G9 Y_RNA.540-201ENST00000384638 111 ntBASIC1.34□□□□□ -2.19
PCDHGA4Q9Y5G9 SNORD71-201ENST00000411292 86 ntBASIC1.34□□□□□ -2.19
PCDHGA4Q9Y5G9 snoR1.1-201ENST00000628177 80 ntBASIC1.34□□□□□ -2.19
PCDHGA4Q9Y5G9 SNORD57-201ENST00000448188 72 ntBASIC1.33□□□□□ -2.2
PCDHGA4Q9Y5G9 Y_RNA.698-201ENST00000516798 118 ntBASIC1.33□□□□□ -2.2
PCDHGA4Q9Y5G9 U6.103-201ENST00000637085 61 ntBASIC1.33□□□□□ -2.2
PCDHGA4Q9Y5G9 RNU6-721P-201ENST00000410155 105 ntBASIC1.32□□□□□ -2.2
PCDHGA4Q9Y5G9 U7.5-201ENST00000517224 61 ntBASIC1.32□□□□□ -2.2
PCDHGA4Q9Y5G9 AP000676.1-201ENST00000533307 52 ntBASIC1.32□□□□□ -2.2
PCDHGA4Q9Y5G9 RNU6-742P-201ENST00000365289 107 ntBASIC1.31□□□□□ -2.2
PCDHGA4Q9Y5G9 MIR760-201ENST00000390220 80 ntBASIC1.29□□□□□ -2.2
PCDHGA4Q9Y5G9 RNU7-88P-201ENST00000458752 63 ntBASIC1.29□□□□□ -2.2
PCDHGA4Q9Y5G9 SNORD63.1-201ENST00000516178 80 ntBASIC1.29□□□□□ -2.2
PCDHGA4Q9Y5G9 RNA5SP480-201ENST00000516840 109 ntBASIC1.29□□□□□ -2.2
PCDHGA4Q9Y5G9 MIR6755-201ENST00000619993 66 ntBASIC1.29□□□□□ -2.2
PCDHGA4Q9Y5G9 MIR96-201ENST00000362288 78 ntBASIC1.28□□□□□ -2.2
PCDHGA4Q9Y5G9 MIR876-201ENST00000401147 81 ntBASIC1.28□□□□□ -2.2
PCDHGA4Q9Y5G9 MIR4661-201ENST00000582720 75 ntBASIC1.28□□□□□ -2.2
PCDHGA4Q9Y5G9 MIR106A-201ENST00000384870 81 ntBASIC1.27□□□□□ -2.21
PCDHGA4Q9Y5G9 MIR518A1-201ENST00000385068 85 ntBASIC1.27□□□□□ -2.21
PCDHGA4Q9Y5G9 RNU6-1174P-201ENST00000517278 101 ntBASIC1.27□□□□□ -2.21
PCDHGA4Q9Y5G9 RNU6-974P-201ENST00000384099 108 ntBASIC1.26□□□□□ -2.21
PCDHGA4Q9Y5G9 MIR29B1-201ENST00000385015 81 ntBASIC1.26□□□□□ -2.21
PCDHGA4Q9Y5G9 RNU4-54P-201ENST00000516428 129 ntBASIC1.26□□□□□ -2.21
PCDHGA4Q9Y5G9 MIR3925-201ENST00000584674 77 ntBASIC1.26□□□□□ -2.21
PCDHGA4Q9Y5G9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
PCDHGA4Q9Y5G9 RNU1-93P-201ENST00000364704 169 ntBASIC1.25□□□□□ -2.21
PCDHGA4Q9Y5G9 MIR3660-201ENST00000584845 100 ntBASIC1.25□□□□□ -2.21
PCDHGA4Q9Y5G9 AC022709.1-201ENST00000615967 87 ntBASIC1.25□□□□□ -2.21
PCDHGA4Q9Y5G9 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
PCDHGA4Q9Y5G9 RNA5SP128-201ENST00000365305 116 ntBASIC1.24□□□□□ -2.21
PCDHGA4Q9Y5G9 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.24□□□□□ -2.21
PCDHGA4Q9Y5G9 AC068338.1-201ENST00000565567 176 ntBASIC1.24□□□□□ -2.21
PCDHGA4Q9Y5G9 MIR6888-201ENST00000621977 67 ntBASIC1.24□□□□□ -2.21
PCDHGA4Q9Y5G9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
PCDHGA4Q9Y5G9 SNORD114-27-201ENST00000363766 70 ntBASIC1.22□□□□□ -2.21
PCDHGA4Q9Y5G9 SNORA62.4-201ENST00000365504 151 ntBASIC1.22□□□□□ -2.21
PCDHGA4Q9Y5G9 SNORD63.2-201ENST00000516303 64 ntBASIC1.22□□□□□ -2.21
PCDHGA4Q9Y5G9 MIR4464-201ENST00000580818 92 ntBASIC1.22□□□□□ -2.21
PCDHGA4Q9Y5G9 MIR6515-201ENST00000619843 57 ntBASIC1.22□□□□□ -2.21
PCDHGA4Q9Y5G9 MTRNR2L9-201ENST00000622562 75 ntBASIC1.22□□□□□ -2.21
PCDHGA4Q9Y5G9 MIR520E-201ENST00000384867 87 ntBASIC1.21□□□□□ -2.22
PCDHGA4Q9Y5G9 AL445584.3-201ENST00000617173 78 ntBASIC1.21□□□□□ -2.22
PCDHGA4Q9Y5G9 Y_RNA.321-201ENST00000365149 102 ntBASIC1.2□□□□□ -2.22
PCDHGA4Q9Y5G9 MIR608-201ENST00000384820 100 ntBASIC1.2□□□□□ -2.22
PCDHGA4Q9Y5G9 RPS29P1-201ENST00000465274 159 ntBASIC1.2□□□□□ -2.22
PCDHGA4Q9Y5G9 OR2A41P-201ENST00000473586 105 ntBASIC1.2□□□□□ -2.22
PCDHGA4Q9Y5G9 AL590095.2-201ENST00000604136 117 ntBASIC1.2□□□□□ -2.22
PCDHGA4Q9Y5G9 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.2□□□□□ -2.22
PCDHGA4Q9Y5G9 AC098934.3-201ENST00000430450 190 ntBASIC1.19□□□□□ -2.22
PCDHGA4Q9Y5G9 SCARNA11.2-201ENST00000517183 154 ntBASIC1.19□□□□□ -2.22
PCDHGA4Q9Y5G9 MIR3170-201ENST00000582699 77 ntBASIC1.19□□□□□ -2.22
PCDHGA4Q9Y5G9 MIR499B-201ENST00000636498 73 ntBASIC1.19□□□□□ -2.22
PCDHGA4Q9Y5G9 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
PCDHGA4Q9Y5G9 RNA5SP98-201ENST00000363158 137 ntBASIC1.18□□□□□ -2.22
PCDHGA4Q9Y5G9 SNORD114-26-201ENST00000363543 72 ntBASIC1.18□□□□□ -2.22
PCDHGA4Q9Y5G9 RNU6-1223P-201ENST00000517124 104 ntBASIC1.18□□□□□ -2.22
PCDHGA4Q9Y5G9 MIR151B-201ENST00000584249 96 ntBASIC1.18□□□□□ -2.22
PCDHGA4Q9Y5G9 RNU6-1008P-201ENST00000384160 104 ntBASIC1.17□□□□□ -2.22
PCDHGA4Q9Y5G9 MIR1285-1-201ENST00000408593 84 ntBASIC1.17□□□□□ -2.22
PCDHGA4Q9Y5G9 RNU6-1133P-201ENST00000410963 100 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 260.9 ms