Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 RNA5SP255-201ENST00000516370 107 ntBASIC0.63□□□□□ -2.31
NOTCH3Q9UM47 MIR4473-201ENST00000583731 91 ntBASIC0.63□□□□□ -2.31
NOTCH3Q9UM47 SNORA40.16-201ENST00000517238 121 ntBASIC0.63□□□□□ -2.31
NOTCH3Q9UM47 AC090617.8-201ENST00000623339 167 ntBASIC0.63□□□□□ -2.31
NOTCH3Q9UM47 SNORD114-2-201ENST00000363953 78 ntBASIC0.62□□□□□ -2.31
NOTCH3Q9UM47 SNORA63.6-201ENST00000364921 119 ntBASIC0.62□□□□□ -2.31
NOTCH3Q9UM47 Y_RNA.407-201ENST00000383986 113 ntBASIC0.62□□□□□ -2.31
NOTCH3Q9UM47 MIR518A1-201ENST00000385068 85 ntBASIC0.62□□□□□ -2.31
NOTCH3Q9UM47 RNU6-122P-201ENST00000516818 107 ntBASIC0.62□□□□□ -2.31
NOTCH3Q9UM47 MIR6755-201ENST00000619993 66 ntBASIC0.62□□□□□ -2.31
NOTCH3Q9UM47 Y_RNA.125-201ENST00000363371 111 ntBASIC0.61□□□□□ -2.31
NOTCH3Q9UM47 Y_RNA.282-201ENST00000364793 102 ntBASIC0.61□□□□□ -2.31
NOTCH3Q9UM47 SNORD116-16-201ENST00000384533 92 ntBASIC0.61□□□□□ -2.31
NOTCH3Q9UM47 MIRLET7B-201ENST00000385140 83 ntBASIC0.61□□□□□ -2.31
NOTCH3Q9UM47 MIR516B1-201ENST00000385211 90 ntBASIC0.61□□□□□ -2.31
NOTCH3Q9UM47 MIR676-201ENST00000390702 67 ntBASIC0.61□□□□□ -2.31
NOTCH3Q9UM47 MIR1255B2-201ENST00000408618 67 ntBASIC0.61□□□□□ -2.31
NOTCH3Q9UM47 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.61□□□□□ -2.31
NOTCH3Q9UM47 AC131280.1-202ENST00000624067 4211 ntBASIC0.61□□□□□ -2.31
NOTCH3Q9UM47 SNORD95.1-201ENST00000364099 68 ntBASIC0.61□□□□□ -2.31
NOTCH3Q9UM47 MIR582-201ENST00000365731 98 ntBASIC0.61□□□□□ -2.31
NOTCH3Q9UM47 MIR652-201ENST00000385278 98 ntBASIC0.61□□□□□ -2.31
NOTCH3Q9UM47 RNA5SP193-201ENST00000410353 107 ntBASIC0.61□□□□□ -2.31
NOTCH3Q9UM47 RNA5SP484-201ENST00000458857 111 ntBASIC0.61□□□□□ -2.31
NOTCH3Q9UM47 MIR5706-201ENST00000579841 80 ntBASIC0.61□□□□□ -2.31
NOTCH3Q9UM47 RNU1-124P-201ENST00000363861 145 ntBASIC0.6□□□□□ -2.31
NOTCH3Q9UM47 RNU4-45P-201ENST00000365469 141 ntBASIC0.6□□□□□ -2.31
NOTCH3Q9UM47 MIR527-201ENST00000385244 85 ntBASIC0.6□□□□□ -2.31
NOTCH3Q9UM47 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.6□□□□□ -2.31
NOTCH3Q9UM47 AC006210.1-201ENST00000424882 111 ntBASIC0.6□□□□□ -2.31
NOTCH3Q9UM47 FABP5P4-201ENST00000437203 171 ntBASIC0.6□□□□□ -2.31
NOTCH3Q9UM47 AL021921.1-201ENST00000442774 93 ntBASIC0.6□□□□□ -2.31
NOTCH3Q9UM47 AC104692.1-201ENST00000472406 90 ntBASIC0.6□□□□□ -2.31
NOTCH3Q9UM47 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.6□□□□□ -2.31
NOTCH3Q9UM47 SNORD1B-201ENST00000363091 84 ntBASIC0.6□□□□□ -2.31
NOTCH3Q9UM47 RNU6-246P-201ENST00000384702 107 ntBASIC0.6□□□□□ -2.31
NOTCH3Q9UM47 SNORA40B-201ENST00000385573 128 ntBASIC0.6□□□□□ -2.31
NOTCH3Q9UM47 RNU7-154P-201ENST00000516194 62 ntBASIC0.6□□□□□ -2.31
NOTCH3Q9UM47 RNU6-1110P-201ENST00000516462 101 ntBASIC0.6□□□□□ -2.31
NOTCH3Q9UM47 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.6□□□□□ -2.31
NOTCH3Q9UM47 MIR6866-201ENST00000638146 69 ntBASIC0.6□□□□□ -2.31
NOTCH3Q9UM47 Y_RNA.185-201ENST00000363894 100 ntBASIC0.59□□□□□ -2.31
NOTCH3Q9UM47 MIR618-201ENST00000385287 98 ntBASIC0.59□□□□□ -2.31
NOTCH3Q9UM47 RNA5SP347-201ENST00000362445 119 ntBASIC0.59□□□□□ -2.32
NOTCH3Q9UM47 MIR517B-201ENST00000385102 67 ntBASIC0.59□□□□□ -2.32
NOTCH3Q9UM47 AC025627.3-201ENST00000582078 182 ntBASIC0.59□□□□□ -2.32
NOTCH3Q9UM47 MIR548AE1-201ENST00000583292 70 ntBASIC0.59□□□□□ -2.32
NOTCH3Q9UM47 SNORD12-201ENST00000391002 90 ntBASIC0.58□□□□□ -2.32
NOTCH3Q9UM47 SNORD57-201ENST00000448188 72 ntBASIC0.58□□□□□ -2.32
NOTCH3Q9UM47 MIR548AD-201ENST00000584780 82 ntBASIC0.58□□□□□ -2.32
NOTCH3Q9UM47 SNORA70.25-201ENST00000612741 95 ntBASIC0.58□□□□□ -2.32
NOTCH3Q9UM47 Y_RNA.74-201ENST00000362911 99 ntBASIC0.58□□□□□ -2.32
NOTCH3Q9UM47 SNORD118-201ENST00000363593 134 ntBASIC0.58□□□□□ -2.32
NOTCH3Q9UM47 Y_RNA.204-201ENST00000364112 102 ntBASIC0.58□□□□□ -2.32
NOTCH3Q9UM47 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.58□□□□□ -2.32
NOTCH3Q9UM47 SCARNA16.5-201ENST00000517114 183 ntBASIC0.58□□□□□ -2.32
NOTCH3Q9UM47 RNA5SP499-201ENST00000363982 119 ntBASIC0.57□□□□□ -2.32
NOTCH3Q9UM47 MIR3612-201ENST00000579753 87 ntBASIC0.57□□□□□ -2.32
NOTCH3Q9UM47 MIR7110-201ENST00000612638 86 ntBASIC0.57□□□□□ -2.32
NOTCH3Q9UM47 MIR6828-201ENST00000636181 60 ntBASIC0.57□□□□□ -2.32
NOTCH3Q9UM47 SNORD124-201ENST00000459577 104 ntBASIC0.56□□□□□ -2.32
NOTCH3Q9UM47 OR2A41P-201ENST00000473586 105 ntBASIC0.56□□□□□ -2.32
NOTCH3Q9UM47 MIR3678-201ENST00000578455 94 ntBASIC0.56□□□□□ -2.32
NOTCH3Q9UM47 RNU1-29P-201ENST00000606574 126 ntBASIC0.56□□□□□ -2.32
NOTCH3Q9UM47 SNORA49-201ENST00000386157 136 ntBASIC0.56□□□□□ -2.32
NOTCH3Q9UM47 RNU6-1246P-201ENST00000391064 107 ntBASIC0.56□□□□□ -2.32
NOTCH3Q9UM47 RNU7-151P-201ENST00000516930 53 ntBASIC0.56□□□□□ -2.32
NOTCH3Q9UM47 Y_RNA.228-201ENST00000364346 98 ntBASIC0.55□□□□□ -2.32
NOTCH3Q9UM47 MIR604-201ENST00000384880 94 ntBASIC0.55□□□□□ -2.32
NOTCH3Q9UM47 RNU6-337P-201ENST00000391243 106 ntBASIC0.55□□□□□ -2.32
NOTCH3Q9UM47 AC002429.1-201ENST00000437672 148 ntBASIC0.55□□□□□ -2.32
NOTCH3Q9UM47 RNA5SP404-201ENST00000517118 132 ntBASIC0.55□□□□□ -2.32
NOTCH3Q9UM47 SNORA25.18-201ENST00000607153 114 ntBASIC0.55□□□□□ -2.32
NOTCH3Q9UM47 MIR6773-201ENST00000612812 74 ntBASIC0.55□□□□□ -2.32
NOTCH3Q9UM47 RNY1P9-201ENST00000532431 109 ntBASIC0.55□□□□□ -2.32
NOTCH3Q9UM47 AC011195.1-201ENST00000578177 177 ntBASIC0.55□□□□□ -2.32
NOTCH3Q9UM47 AC243829.3-201ENST00000622177 108 ntBASIC0.55□□□□□ -2.32
NOTCH3Q9UM47 RNU6-924P-201ENST00000362926 108 ntBASIC0.54□□□□□ -2.32
NOTCH3Q9UM47 RNA5SP98-201ENST00000363158 137 ntBASIC0.54□□□□□ -2.32
NOTCH3Q9UM47 RNY4P7-201ENST00000364600 96 ntBASIC0.54□□□□□ -2.32
NOTCH3Q9UM47 Y_RNA.468-201ENST00000384298 102 ntBASIC0.54□□□□□ -2.32
NOTCH3Q9UM47 RNU6-231P-201ENST00000517122 103 ntBASIC0.54□□□□□ -2.32
NOTCH3Q9UM47 MIR198-201ENST00000637333 62 ntBASIC0.54□□□□□ -2.32
NOTCH3Q9UM47 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
NOTCH3Q9UM47 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
NOTCH3Q9UM47 RNU6-930P-201ENST00000390938 100 ntBASIC0.54□□□□□ -2.32
NOTCH3Q9UM47 RNA5SP94-201ENST00000516917 108 ntBASIC0.54□□□□□ -2.32
NOTCH3Q9UM47 SNORA36.1-201ENST00000363424 132 ntBASIC0.53□□□□□ -2.32
NOTCH3Q9UM47 MIR608-201ENST00000384820 100 ntBASIC0.53□□□□□ -2.32
NOTCH3Q9UM47 MIR508-201ENST00000384857 115 ntBASIC0.53□□□□□ -2.32
NOTCH3Q9UM47 RNU6-1250P-201ENST00000391218 107 ntBASIC0.53□□□□□ -2.32
NOTCH3Q9UM47 MIR4490-201ENST00000582647 84 ntBASIC0.53□□□□□ -2.32
NOTCH3Q9UM47 U6.96-201ENST00000636425 70 ntBASIC0.53□□□□□ -2.32
NOTCH3Q9UM47 RNA5SP327-201ENST00000362494 101 ntBASIC0.53□□□□□ -2.33
NOTCH3Q9UM47 RNU6-810P-201ENST00000364001 107 ntBASIC0.53□□□□□ -2.33
NOTCH3Q9UM47 SNORA36.2-201ENST00000384004 127 ntBASIC0.53□□□□□ -2.33
NOTCH3Q9UM47 Y_RNA.423-201ENST00000384057 113 ntBASIC0.53□□□□□ -2.33
NOTCH3Q9UM47 RNA5SP63-201ENST00000391225 112 ntBASIC0.53□□□□□ -2.33
NOTCH3Q9UM47 ACA64.5-201ENST00000516207 127 ntBASIC0.53□□□□□ -2.33
NOTCH3Q9UM47 MIR4677-201ENST00000584153 80 ntBASIC0.53□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 1225 ms