Protein–RNA interactions for Protein: Q9NYG2

ZDHHC3, Palmitoyltransferase ZDHHC3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC3Q9NYG2 RNU6-936P-201ENST00000384005 107 ntBASIC0.79□□□□□ -2.28
ZDHHC3Q9NYG2 SNORD116-16-201ENST00000384533 92 ntBASIC0.79□□□□□ -2.28
ZDHHC3Q9NYG2 RNU7-119P-201ENST00000459279 63 ntBASIC0.79□□□□□ -2.28
ZDHHC3Q9NYG2 RNU7-154P-201ENST00000516194 62 ntBASIC0.79□□□□□ -2.28
ZDHHC3Q9NYG2 MIR3925-201ENST00000584674 77 ntBASIC0.79□□□□□ -2.28
ZDHHC3Q9NYG2 Y_RNA.282-201ENST00000364793 102 ntBASIC0.78□□□□□ -2.28
ZDHHC3Q9NYG2 MIR520E-201ENST00000384867 87 ntBASIC0.78□□□□□ -2.28
ZDHHC3Q9NYG2 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.78□□□□□ -2.28
ZDHHC3Q9NYG2 RPS29P1-201ENST00000465274 159 ntBASIC0.78□□□□□ -2.28
ZDHHC3Q9NYG2 RNA5SP470-201ENST00000516463 106 ntBASIC0.78□□□□□ -2.28
ZDHHC3Q9NYG2 RNU6-502P-201ENST00000362419 108 ntBASIC0.77□□□□□ -2.29
ZDHHC3Q9NYG2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.77□□□□□ -2.29
ZDHHC3Q9NYG2 RNU6-863P-201ENST00000515989 104 ntBASIC0.77□□□□□ -2.29
ZDHHC3Q9NYG2 RNU6-231P-201ENST00000517122 103 ntBASIC0.77□□□□□ -2.29
ZDHHC3Q9NYG2 SCARNA11.2-201ENST00000517183 154 ntBASIC0.77□□□□□ -2.29
ZDHHC3Q9NYG2 MIR4653-201ENST00000585107 83 ntBASIC0.77□□□□□ -2.29
ZDHHC3Q9NYG2 SNORD44.1-201ENST00000363202 61 ntBASIC0.76□□□□□ -2.29
ZDHHC3Q9NYG2 AP000676.1-201ENST00000533307 52 ntBASIC0.76□□□□□ -2.29
ZDHHC3Q9NYG2 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
ZDHHC3Q9NYG2 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
ZDHHC3Q9NYG2 RNU6-808P-201ENST00000391233 108 ntBASIC0.75□□□□□ -2.29
ZDHHC3Q9NYG2 SNORD116.2-201ENST00000391251 93 ntBASIC0.75□□□□□ -2.29
ZDHHC3Q9NYG2 MIR876-201ENST00000401147 81 ntBASIC0.75□□□□□ -2.29
ZDHHC3Q9NYG2 MIR6734-201ENST00000621166 68 ntBASIC0.75□□□□□ -2.29
ZDHHC3Q9NYG2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
ZDHHC3Q9NYG2 MIR548AG1-201ENST00000579932 66 ntBASIC0.74□□□□□ -2.29
ZDHHC3Q9NYG2 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.73□□□□□ -2.29
ZDHHC3Q9NYG2 SNORA68.3-201ENST00000515906 83 ntBASIC0.72□□□□□ -2.29
ZDHHC3Q9NYG2 RNA5SP220-201ENST00000516298 104 ntBASIC0.72□□□□□ -2.29
ZDHHC3Q9NYG2 MIR429-201ENST00000362106 83 ntBASIC0.71□□□□□ -2.3
ZDHHC3Q9NYG2 MIR103A1-201ENST00000362165 78 ntBASIC0.71□□□□□ -2.3
ZDHHC3Q9NYG2 RNU6-246P-201ENST00000384702 107 ntBASIC0.71□□□□□ -2.3
ZDHHC3Q9NYG2 MIR548J-201ENST00000408833 112 ntBASIC0.7□□□□□ -2.3
ZDHHC3Q9NYG2 CYP3A137P-201ENST00000562436 69 ntBASIC0.7□□□□□ -2.3
ZDHHC3Q9NYG2 MIR151B-201ENST00000584249 96 ntBASIC0.7□□□□□ -2.3
ZDHHC3Q9NYG2 MIR7110-201ENST00000612638 86 ntBASIC0.7□□□□□ -2.3
ZDHHC3Q9NYG2 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
ZDHHC3Q9NYG2 Y_RNA.109-201ENST00000363215 102 ntBASIC0.69□□□□□ -2.3
ZDHHC3Q9NYG2 RNU6-42P-201ENST00000384165 107 ntBASIC0.69□□□□□ -2.3
ZDHHC3Q9NYG2 RNU6-1184P-201ENST00000384588 108 ntBASIC0.69□□□□□ -2.3
ZDHHC3Q9NYG2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.69□□□□□ -2.3
ZDHHC3Q9NYG2 AL353803.5-201ENST00000599815 141 ntBASIC0.69□□□□□ -2.3
ZDHHC3Q9NYG2 MIR6788-201ENST00000618842 66 ntBASIC0.69□□□□□ -2.3
ZDHHC3Q9NYG2 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.69□□□□□ -2.3
ZDHHC3Q9NYG2 RNU6-458P-201ENST00000384179 107 ntBASIC0.68□□□□□ -2.3
ZDHHC3Q9NYG2 RNA5SP121-201ENST00000516537 101 ntBASIC0.68□□□□□ -2.3
ZDHHC3Q9NYG2 U6.58-201ENST00000613107 107 ntBASIC0.68□□□□□ -2.3
ZDHHC3Q9NYG2 snoR1.1-201ENST00000628177 80 ntBASIC0.68□□□□□ -2.3
ZDHHC3Q9NYG2 MIR106A-201ENST00000384870 81 ntBASIC0.67□□□□□ -2.3
ZDHHC3Q9NYG2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
ZDHHC3Q9NYG2 RNA5SP98-201ENST00000363158 137 ntBASIC0.66□□□□□ -2.3
ZDHHC3Q9NYG2 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
ZDHHC3Q9NYG2 AC108740.1-201ENST00000498629 225 ntBASIC0.66□□□□□ -2.3
ZDHHC3Q9NYG2 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.65□□□□□ -2.3
ZDHHC3Q9NYG2 SNORD1B-201ENST00000363091 84 ntBASIC0.65□□□□□ -2.31
ZDHHC3Q9NYG2 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
ZDHHC3Q9NYG2 RNU6-127P-201ENST00000390897 107 ntBASIC0.65□□□□□ -2.31
ZDHHC3Q9NYG2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.65□□□□□ -2.31
ZDHHC3Q9NYG2 RNU6-172P-201ENST00000411000 93 ntBASIC0.65□□□□□ -2.31
ZDHHC3Q9NYG2 MIRLET7D-201ENST00000362263 87 ntBASIC0.64□□□□□ -2.31
ZDHHC3Q9NYG2 Y_RNA.118-201ENST00000363300 101 ntBASIC0.64□□□□□ -2.31
ZDHHC3Q9NYG2 Y_RNA.355-201ENST00000365462 98 ntBASIC0.64□□□□□ -2.31
ZDHHC3Q9NYG2 RNU6-815P-201ENST00000384080 113 ntBASIC0.64□□□□□ -2.31
ZDHHC3Q9NYG2 MIR643-201ENST00000385267 97 ntBASIC0.64□□□□□ -2.31
ZDHHC3Q9NYG2 RNU6-1223P-201ENST00000517124 104 ntBASIC0.64□□□□□ -2.31
ZDHHC3Q9NYG2 uc_338.17-201ENST00000619633 179 ntBASIC0.64□□□□□ -2.31
ZDHHC3Q9NYG2 RNA5SP62-201ENST00000363457 110 ntBASIC0.62□□□□□ -2.31
ZDHHC3Q9NYG2 snoU13.18-201ENST00000459483 104 ntBASIC0.62□□□□□ -2.31
ZDHHC3Q9NYG2 SNORA40.16-201ENST00000517238 121 ntBASIC0.62□□□□□ -2.31
ZDHHC3Q9NYG2 RNU6-810P-201ENST00000364001 107 ntBASIC0.61□□□□□ -2.31
ZDHHC3Q9NYG2 SNORD115-23-201ENST00000364461 82 ntBASIC0.61□□□□□ -2.31
ZDHHC3Q9NYG2 MIR5000-201ENST00000577717 103 ntBASIC0.61□□□□□ -2.31
ZDHHC3Q9NYG2 MIR4432-201ENST00000581823 84 ntBASIC0.61□□□□□ -2.31
ZDHHC3Q9NYG2 uc_338.36-201ENST00000622331 158 ntBASIC0.61□□□□□ -2.31
ZDHHC3Q9NYG2 MIR4714-201ENST00000580728 77 ntBASIC0.6□□□□□ -2.31
ZDHHC3Q9NYG2 MIR6514-201ENST00000622549 70 ntBASIC0.6□□□□□ -2.31
ZDHHC3Q9NYG2 SNORA40B-201ENST00000385573 128 ntBASIC0.59□□□□□ -2.31
ZDHHC3Q9NYG2 RNU6-1133P-201ENST00000410963 100 ntBASIC0.59□□□□□ -2.31
ZDHHC3Q9NYG2 AC108676.2-201ENST00000605225 163 ntBASIC0.58□□□□□ -2.32
ZDHHC3Q9NYG2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
ZDHHC3Q9NYG2 Y_RNA.379-201ENST00000365653 102 ntBASIC0.57□□□□□ -2.32
ZDHHC3Q9NYG2 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
ZDHHC3Q9NYG2 AC022709.1-201ENST00000615967 87 ntBASIC0.57□□□□□ -2.32
ZDHHC3Q9NYG2 MIR6515-201ENST00000619843 57 ntBASIC0.57□□□□□ -2.32
ZDHHC3Q9NYG2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.56□□□□□ -2.32
ZDHHC3Q9NYG2 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.56□□□□□ -2.32
ZDHHC3Q9NYG2 MIR216A-201ENST00000385063 110 ntBASIC0.55□□□□□ -2.32
ZDHHC3Q9NYG2 RNA5SP163-201ENST00000410304 99 ntBASIC0.55□□□□□ -2.32
ZDHHC3Q9NYG2 RNA5SP436-201ENST00000516020 115 ntBASIC0.55□□□□□ -2.32
ZDHHC3Q9NYG2 AC069113.3-201ENST00000521019 150 ntBASIC0.55□□□□□ -2.32
ZDHHC3Q9NYG2 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.55□□□□□ -2.32
ZDHHC3Q9NYG2 AL391099.1-201ENST00000624635 187 ntBASIC0.55□□□□□ -2.32
ZDHHC3Q9NYG2 U2.18-201ENST00000622185 84 ntBASIC0.54□□□□□ -2.32
ZDHHC3Q9NYG2 RNA5SP325-201ENST00000363756 130 ntBASIC0.53□□□□□ -2.32
ZDHHC3Q9NYG2 RNU6-598P-201ENST00000364017 105 ntBASIC0.53□□□□□ -2.32
ZDHHC3Q9NYG2 MIR489-201ENST00000384923 84 ntBASIC0.53□□□□□ -2.32
ZDHHC3Q9NYG2 MIR579-201ENST00000385221 98 ntBASIC0.53□□□□□ -2.32
ZDHHC3Q9NYG2 RNU6-753P-201ENST00000363926 107 ntBASIC0.51□□□□□ -2.33
ZDHHC3Q9NYG2 RNA5SP499-201ENST00000363982 119 ntBASIC0.51□□□□□ -2.33
ZDHHC3Q9NYG2 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 239 ms