Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC243829.6-201ENST00000612652 106 ntBASIC0.59□□□□□ -2.31
PDLIM7Q9NR12 AC084368.1-201ENST00000620935 65 ntBASIC0.59□□□□□ -2.31
PDLIM7Q9NR12 MIR103A1-201ENST00000362165 78 ntBASIC0.58□□□□□ -2.32
PDLIM7Q9NR12 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.58□□□□□ -2.32
PDLIM7Q9NR12 Y_RNA.375-201ENST00000365625 101 ntBASIC0.57□□□□□ -2.32
PDLIM7Q9NR12 VTRNA1-3-201ENST00000365645 89 ntBASIC0.57□□□□□ -2.32
PDLIM7Q9NR12 MIR4511-201ENST00000582784 87 ntBASIC0.57□□□□□ -2.32
PDLIM7Q9NR12 U6.96-201ENST00000636425 70 ntBASIC0.56□□□□□ -2.32
PDLIM7Q9NR12 RNU6-175P-201ENST00000516896 107 ntBASIC0.55□□□□□ -2.32
PDLIM7Q9NR12 MIR3925-201ENST00000584674 77 ntBASIC0.55□□□□□ -2.32
PDLIM7Q9NR12 AC103706.3-201ENST00000636297 85 ntBASIC0.55□□□□□ -2.32
PDLIM7Q9NR12 RNA5SP215-201ENST00000363440 122 ntBASIC0.54□□□□□ -2.32
PDLIM7Q9NR12 AC114737.2-201ENST00000421583 173 ntBASIC0.54□□□□□ -2.32
PDLIM7Q9NR12 RNU6-542P-201ENST00000516405 103 ntBASIC0.54□□□□□ -2.32
PDLIM7Q9NR12 MIR4514-201ENST00000581410 57 ntBASIC0.54□□□□□ -2.32
PDLIM7Q9NR12 MIR548V-201ENST00000584165 80 ntBASIC0.54□□□□□ -2.32
PDLIM7Q9NR12 MIRLET7D-201ENST00000362263 87 ntBASIC0.53□□□□□ -2.32
PDLIM7Q9NR12 RNU6-35P-201ENST00000384530 107 ntBASIC0.53□□□□□ -2.32
PDLIM7Q9NR12 RNA5SP299-201ENST00000391203 116 ntBASIC0.53□□□□□ -2.32
PDLIM7Q9NR12 RN7SL660P-201ENST00000614852 299 ntBASIC0.53□□□□□ -2.32
PDLIM7Q9NR12 U2.7-201ENST00000619197 100 ntBASIC0.53□□□□□ -2.32
PDLIM7Q9NR12 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
PDLIM7Q9NR12 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
PDLIM7Q9NR12 RNU6-1036P-201ENST00000383959 104 ntBASIC0.52□□□□□ -2.33
PDLIM7Q9NR12 MIR9-2-201ENST00000384838 87 ntBASIC0.52□□□□□ -2.33
PDLIM7Q9NR12 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
PDLIM7Q9NR12 AC090617.8-201ENST00000623339 167 ntBASIC0.52□□□□□ -2.33
PDLIM7Q9NR12 AC090625.1-201ENST00000357130 210 ntBASIC0.51□□□□□ -2.33
PDLIM7Q9NR12 SNORA49-201ENST00000386157 136 ntBASIC0.51□□□□□ -2.33
PDLIM7Q9NR12 SNORD2-201ENST00000459163 69 ntBASIC0.51□□□□□ -2.33
PDLIM7Q9NR12 HAR1A.1-201ENST00000459583 118 ntBASIC0.51□□□□□ -2.33
PDLIM7Q9NR12 SNORA62.5-201ENST00000516634 120 ntBASIC0.51□□□□□ -2.33
PDLIM7Q9NR12 CYP3A54P-201ENST00000566950 75 ntBASIC0.51□□□□□ -2.33
PDLIM7Q9NR12 SNORA9.1-201ENST00000362412 131 ntBASIC0.5□□□□□ -2.33
PDLIM7Q9NR12 RNU6-815P-201ENST00000384080 113 ntBASIC0.5□□□□□ -2.33
PDLIM7Q9NR12 SCARNA11.2-201ENST00000517183 154 ntBASIC0.5□□□□□ -2.33
PDLIM7Q9NR12 RNA5SP63-201ENST00000391225 112 ntBASIC0.49□□□□□ -2.33
PDLIM7Q9NR12 MIR876-201ENST00000401147 81 ntBASIC0.49□□□□□ -2.33
PDLIM7Q9NR12 AC023932.2-201ENST00000603176 175 ntBASIC0.49□□□□□ -2.33
PDLIM7Q9NR12 RNU6-127P-201ENST00000390897 107 ntBASIC0.48□□□□□ -2.33
PDLIM7Q9NR12 MIR630-201ENST00000384957 97 ntBASIC0.47□□□□□ -2.33
PDLIM7Q9NR12 MIR517B-201ENST00000385102 67 ntBASIC0.47□□□□□ -2.33
PDLIM7Q9NR12 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
PDLIM7Q9NR12 SNORA75.1-201ENST00000391130 148 ntBASIC0.47□□□□□ -2.33
PDLIM7Q9NR12 SCARNA21.1-201ENST00000515996 128 ntBASIC0.47□□□□□ -2.33
PDLIM7Q9NR12 RNU7-174P-201ENST00000516248 59 ntBASIC0.47□□□□□ -2.33
PDLIM7Q9NR12 RNU6-302P-201ENST00000365249 107 ntBASIC0.46□□□□□ -2.34
PDLIM7Q9NR12 RNU6-337P-201ENST00000391243 106 ntBASIC0.46□□□□□ -2.34
PDLIM7Q9NR12 MIR6773-201ENST00000612812 74 ntBASIC0.46□□□□□ -2.34
PDLIM7Q9NR12 AC110620.1-201ENST00000416042 228 ntBASIC0.45□□□□□ -2.34
PDLIM7Q9NR12 MIR1255B2-201ENST00000408618 67 ntBASIC0.44□□□□□ -2.34
PDLIM7Q9NR12 RNA5SP285-201ENST00000516619 119 ntBASIC0.44□□□□□ -2.34
PDLIM7Q9NR12 RNU6-782P-201ENST00000516852 104 ntBASIC0.44□□□□□ -2.34
PDLIM7Q9NR12 SNORD115-25-201ENST00000362619 82 ntBASIC0.43□□□□□ -2.34
PDLIM7Q9NR12 RNU6-698P-201ENST00000363523 107 ntBASIC0.43□□□□□ -2.34
PDLIM7Q9NR12 RNU6-34P-201ENST00000364874 107 ntBASIC0.43□□□□□ -2.34
PDLIM7Q9NR12 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
PDLIM7Q9NR12 MIR643-201ENST00000385267 97 ntBASIC0.43□□□□□ -2.34
PDLIM7Q9NR12 AC069113.3-201ENST00000521019 150 ntBASIC0.43□□□□□ -2.34
PDLIM7Q9NR12 SNORA25.5-201ENST00000363782 126 ntBASIC0.42□□□□□ -2.34
PDLIM7Q9NR12 RNU6-1327P-201ENST00000365302 105 ntBASIC0.42□□□□□ -2.34
PDLIM7Q9NR12 RNU6-518P-201ENST00000516056 96 ntBASIC0.42□□□□□ -2.34
PDLIM7Q9NR12 RNU6-502P-201ENST00000362419 108 ntBASIC0.41□□□□□ -2.34
PDLIM7Q9NR12 RNA5SP192-201ENST00000364404 120 ntBASIC0.41□□□□□ -2.34
PDLIM7Q9NR12 AL021921.1-201ENST00000442774 93 ntBASIC0.41□□□□□ -2.34
PDLIM7Q9NR12 AP000676.1-201ENST00000533307 52 ntBASIC0.41□□□□□ -2.34
PDLIM7Q9NR12 U4.4-201ENST00000620626 117 ntBASIC0.41□□□□□ -2.34
PDLIM7Q9NR12 MIR106A-201ENST00000384870 81 ntBASIC0.4□□□□□ -2.35
PDLIM7Q9NR12 SNORD113-2-201ENST00000391082 72 ntBASIC0.4□□□□□ -2.35
PDLIM7Q9NR12 RNU6-92P-201ENST00000605893 104 ntBASIC0.4□□□□□ -2.35
PDLIM7Q9NR12 MIR6086-201ENST00000638065 55 ntBASIC0.4□□□□□ -2.35
PDLIM7Q9NR12 Y_RNA.246-201ENST00000364495 108 ntBASIC0.39□□□□□ -2.35
PDLIM7Q9NR12 MIRLET7B-201ENST00000385140 83 ntBASIC0.39□□□□□ -2.35
PDLIM7Q9NR12 AC108740.1-201ENST00000498629 225 ntBASIC0.39□□□□□ -2.35
PDLIM7Q9NR12 RNU6-669P-201ENST00000365575 107 ntBASIC0.38□□□□□ -2.35
PDLIM7Q9NR12 MIR519A2-201ENST00000384990 87 ntBASIC0.38□□□□□ -2.35
PDLIM7Q9NR12 RNA5SP134-201ENST00000516492 96 ntBASIC0.38□□□□□ -2.35
PDLIM7Q9NR12 MIR6718-201ENST00000616153 80 ntBASIC0.38□□□□□ -2.35
PDLIM7Q9NR12 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.38□□□□□ -2.35
PDLIM7Q9NR12 Y_RNA.325-201ENST00000365171 122 ntBASIC0.37□□□□□ -2.35
PDLIM7Q9NR12 RNU6-1246P-201ENST00000391064 107 ntBASIC0.37□□□□□ -2.35
PDLIM7Q9NR12 RNA5SP98-201ENST00000363158 137 ntBASIC0.36□□□□□ -2.35
PDLIM7Q9NR12 MIR6514-201ENST00000622549 70 ntBASIC0.36□□□□□ -2.35
PDLIM7Q9NR12 MIR6759-201ENST00000638110 65 ntBASIC0.36□□□□□ -2.35
PDLIM7Q9NR12 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.36□□□□□ -2.35
PDLIM7Q9NR12 MIR548H2-201ENST00000408874 88 ntBASIC0.35□□□□□ -2.35
PDLIM7Q9NR12 RNU6-940P-201ENST00000363433 104 ntBASIC0.34□□□□□ -2.36
PDLIM7Q9NR12 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.34□□□□□ -2.36
PDLIM7Q9NR12 SNORD60.1-201ENST00000362451 73 ntBASIC0.33□□□□□ -2.36
PDLIM7Q9NR12 RNA5SP163-201ENST00000410304 99 ntBASIC0.33□□□□□ -2.36
PDLIM7Q9NR12 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.33□□□□□ -2.36
PDLIM7Q9NR12 RNA5SP470-201ENST00000516463 106 ntBASIC0.33□□□□□ -2.36
PDLIM7Q9NR12 MIR466-201ENST00000580653 84 ntBASIC0.33□□□□□ -2.36
PDLIM7Q9NR12 MIR4315-1-201ENST00000636800 73 ntBASIC0.33□□□□□ -2.36
PDLIM7Q9NR12 MIR4315-2-201ENST00000640925 73 ntBASIC0.33□□□□□ -2.36
PDLIM7Q9NR12 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.32□□□□□ -2.36
PDLIM7Q9NR12 MIR329-2-201ENST00000385029 84 ntBASIC0.31□□□□□ -2.36
PDLIM7Q9NR12 RNU7-154P-201ENST00000516194 62 ntBASIC0.31□□□□□ -2.36
PDLIM7Q9NR12 RNU6-122P-201ENST00000516818 107 ntBASIC0.31□□□□□ -2.36
PDLIM7Q9NR12 Y_RNA.74-201ENST00000362911 99 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms