Protein–RNA interactions for Protein: Q9H3S1

SEMA4A, Semaphorin-4A, humanhuman

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4AQ9H3S1 RNU6-92P-201ENST00000605893 104 ntBASIC0.74□□□□□ -2.29
SEMA4AQ9H3S1 SNORD60.1-201ENST00000362451 73 ntBASIC0.73□□□□□ -2.29
SEMA4AQ9H3S1 SNORA40.8-201ENST00000411034 126 ntBASIC0.73□□□□□ -2.29
SEMA4AQ9H3S1 SNORD71-201ENST00000411292 86 ntBASIC0.73□□□□□ -2.29
SEMA4AQ9H3S1 RNU7-188P-201ENST00000517063 64 ntBASIC0.73□□□□□ -2.29
SEMA4AQ9H3S1 AC243829.3-201ENST00000622177 108 ntBASIC0.73□□□□□ -2.29
SEMA4AQ9H3S1 SNORD118-201ENST00000363593 134 ntBASIC0.72□□□□□ -2.29
SEMA4AQ9H3S1 Y_RNA.250-201ENST00000364542 110 ntBASIC0.72□□□□□ -2.29
SEMA4AQ9H3S1 Y_RNA.325-201ENST00000365171 122 ntBASIC0.72□□□□□ -2.29
SEMA4AQ9H3S1 RNU6-614P-201ENST00000384369 107 ntBASIC0.72□□□□□ -2.29
SEMA4AQ9H3S1 U6.59-201ENST00000615686 107 ntBASIC0.72□□□□□ -2.29
SEMA4AQ9H3S1 MIR6755-201ENST00000619993 66 ntBASIC0.72□□□□□ -2.29
SEMA4AQ9H3S1 MIR5087-201ENST00000635826 76 ntBASIC0.72□□□□□ -2.29
SEMA4AQ9H3S1 RNU6-940P-201ENST00000363433 104 ntBASIC0.71□□□□□ -2.3
SEMA4AQ9H3S1 SNORA15B-2-201ENST00000384058 135 ntBASIC0.71□□□□□ -2.3
SEMA4AQ9H3S1 SNORA15B-1-201ENST00000384334 135 ntBASIC0.71□□□□□ -2.3
SEMA4AQ9H3S1 AC243829.6-201ENST00000612652 106 ntBASIC0.71□□□□□ -2.3
SEMA4AQ9H3S1 MIR6086-201ENST00000638065 55 ntBASIC0.71□□□□□ -2.3
SEMA4AQ9H3S1 Y_RNA.236-201ENST00000364427 111 ntBASIC0.7□□□□□ -2.3
SEMA4AQ9H3S1 SNORD113-2-201ENST00000391082 72 ntBASIC0.7□□□□□ -2.3
SEMA4AQ9H3S1 MIR5706-201ENST00000579841 80 ntBASIC0.7□□□□□ -2.3
SEMA4AQ9H3S1 MIR499B-201ENST00000636498 73 ntBASIC0.7□□□□□ -2.3
SEMA4AQ9H3S1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
SEMA4AQ9H3S1 SNORD113-4-201ENST00000364802 75 ntBASIC0.69□□□□□ -2.3
SEMA4AQ9H3S1 RNU6-302P-201ENST00000365249 107 ntBASIC0.69□□□□□ -2.3
SEMA4AQ9H3S1 SNORA2A-201ENST00000383885 135 ntBASIC0.69□□□□□ -2.3
SEMA4AQ9H3S1 SNORA41B-201ENST00000384785 128 ntBASIC0.69□□□□□ -2.3
SEMA4AQ9H3S1 MIR1255B2-201ENST00000408618 67 ntBASIC0.69□□□□□ -2.3
SEMA4AQ9H3S1 AC098934.3-201ENST00000430450 190 ntBASIC0.69□□□□□ -2.3
SEMA4AQ9H3S1 RNU6-863P-201ENST00000515989 104 ntBASIC0.69□□□□□ -2.3
SEMA4AQ9H3S1 RNU6-518P-201ENST00000516056 96 ntBASIC0.69□□□□□ -2.3
SEMA4AQ9H3S1 RNU7-129P-201ENST00000516128 62 ntBASIC0.69□□□□□ -2.3
SEMA4AQ9H3S1 RNU6-122P-201ENST00000516818 107 ntBASIC0.69□□□□□ -2.3
SEMA4AQ9H3S1 RNU6-698P-201ENST00000363523 107 ntBASIC0.68□□□□□ -2.3
SEMA4AQ9H3S1 RNU6-34P-201ENST00000364874 107 ntBASIC0.68□□□□□ -2.3
SEMA4AQ9H3S1 SNORA49-201ENST00000386157 136 ntBASIC0.68□□□□□ -2.3
SEMA4AQ9H3S1 MIR501-201ENST00000390204 84 ntBASIC0.68□□□□□ -2.3
SEMA4AQ9H3S1 RNU6-848P-201ENST00000515948 107 ntBASIC0.68□□□□□ -2.3
SEMA4AQ9H3S1 RNU6-617P-201ENST00000516147 107 ntBASIC0.68□□□□□ -2.3
SEMA4AQ9H3S1 RNU6-473P-201ENST00000516164 107 ntBASIC0.68□□□□□ -2.3
SEMA4AQ9H3S1 RNU6-1049P-201ENST00000516414 107 ntBASIC0.68□□□□□ -2.3
SEMA4AQ9H3S1 MIR548AG1-201ENST00000579932 66 ntBASIC0.68□□□□□ -2.3
SEMA4AQ9H3S1 Y_RNA.246-201ENST00000364495 108 ntBASIC0.67□□□□□ -2.3
SEMA4AQ9H3S1 MIR518A1-201ENST00000385068 85 ntBASIC0.67□□□□□ -2.3
SEMA4AQ9H3S1 MIR760-201ENST00000390220 80 ntBASIC0.67□□□□□ -2.3
SEMA4AQ9H3S1 RNU6-337P-201ENST00000391243 106 ntBASIC0.67□□□□□ -2.3
SEMA4AQ9H3S1 RNA5SP285-201ENST00000516619 119 ntBASIC0.67□□□□□ -2.3
SEMA4AQ9H3S1 SNORA62.5-201ENST00000516634 120 ntBASIC0.67□□□□□ -2.3
SEMA4AQ9H3S1 RNU6-175P-201ENST00000516896 107 ntBASIC0.67□□□□□ -2.3
SEMA4AQ9H3S1 MIR3938-201ENST00000582157 103 ntBASIC0.67□□□□□ -2.3
SEMA4AQ9H3S1 MIR20A-201ENST00000362279 71 ntBASIC0.66□□□□□ -2.3
SEMA4AQ9H3S1 RNU6-1036P-201ENST00000383959 104 ntBASIC0.66□□□□□ -2.3
SEMA4AQ9H3S1 MIR519A2-201ENST00000384990 87 ntBASIC0.66□□□□□ -2.3
SEMA4AQ9H3S1 MIR4677-201ENST00000584153 80 ntBASIC0.66□□□□□ -2.3
SEMA4AQ9H3S1 MIR7978-201ENST00000636158 59 ntBASIC0.66□□□□□ -2.3
SEMA4AQ9H3S1 RNU6-1312P-201ENST00000362425 108 ntBASIC0.65□□□□□ -2.31
SEMA4AQ9H3S1 AC244090.1-201ENST00000441884 93 ntBASIC0.65□□□□□ -2.31
SEMA4AQ9H3S1 RN7SL660P-201ENST00000614852 299 ntBASIC0.65□□□□□ -2.31
SEMA4AQ9H3S1 RNU6-945P-201ENST00000383947 107 ntBASIC0.64□□□□□ -2.31
SEMA4AQ9H3S1 AC084368.1-201ENST00000620935 65 ntBASIC0.64□□□□□ -2.31
SEMA4AQ9H3S1 MIR3925-201ENST00000584674 77 ntBASIC0.63□□□□□ -2.31
SEMA4AQ9H3S1 MIR2909-201ENST00000617113 69 ntBASIC0.63□□□□□ -2.31
SEMA4AQ9H3S1 SNORD114-29-201ENST00000364819 70 ntBASIC0.62□□□□□ -2.31
SEMA4AQ9H3S1 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.62□□□□□ -2.31
SEMA4AQ9H3S1 RNA5SP63-201ENST00000391225 112 ntBASIC0.62□□□□□ -2.31
SEMA4AQ9H3S1 MIR6773-201ENST00000612812 74 ntBASIC0.62□□□□□ -2.31
SEMA4AQ9H3S1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
SEMA4AQ9H3S1 MIR103A1-201ENST00000362165 78 ntBASIC0.61□□□□□ -2.31
SEMA4AQ9H3S1 MIR548AD-201ENST00000584780 82 ntBASIC0.61□□□□□ -2.31
SEMA4AQ9H3S1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.61□□□□□ -2.31
SEMA4AQ9H3S1 VTRNA1-3-201ENST00000365645 89 ntBASIC0.6□□□□□ -2.31
SEMA4AQ9H3S1 MIR106A-201ENST00000384870 81 ntBASIC0.6□□□□□ -2.31
SEMA4AQ9H3S1 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
SEMA4AQ9H3S1 RNU6-141P-201ENST00000410499 105 ntBASIC0.6□□□□□ -2.31
SEMA4AQ9H3S1 AL627230.5-201ENST00000619807 58 ntBASIC0.6□□□□□ -2.31
SEMA4AQ9H3S1 MIR527-201ENST00000385244 85 ntBASIC0.59□□□□□ -2.31
SEMA4AQ9H3S1 RNU6-782P-201ENST00000516852 104 ntBASIC0.59□□□□□ -2.31
SEMA4AQ9H3S1 U7.6-201ENST00000610841 64 ntBASIC0.59□□□□□ -2.31
SEMA4AQ9H3S1 SNORD44.1-201ENST00000363202 61 ntBASIC0.58□□□□□ -2.32
SEMA4AQ9H3S1 RNA5SP499-201ENST00000363982 119 ntBASIC0.58□□□□□ -2.32
SEMA4AQ9H3S1 AL021921.1-201ENST00000442774 93 ntBASIC0.58□□□□□ -2.32
SEMA4AQ9H3S1 SNORA68.3-201ENST00000515906 83 ntBASIC0.58□□□□□ -2.32
SEMA4AQ9H3S1 AP000676.1-201ENST00000533307 52 ntBASIC0.58□□□□□ -2.32
SEMA4AQ9H3S1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
SEMA4AQ9H3S1 RNA5SP128-201ENST00000365305 116 ntBASIC0.57□□□□□ -2.32
SEMA4AQ9H3S1 RNU6-936P-201ENST00000384005 107 ntBASIC0.57□□□□□ -2.32
SEMA4AQ9H3S1 SNORA50A-201ENST00000384225 134 ntBASIC0.57□□□□□ -2.32
SEMA4AQ9H3S1 AC023932.2-201ENST00000603176 175 ntBASIC0.57□□□□□ -2.32
SEMA4AQ9H3S1 RNU6-502P-201ENST00000362419 108 ntBASIC0.56□□□□□ -2.32
SEMA4AQ9H3S1 SNORD115-25-201ENST00000362619 82 ntBASIC0.56□□□□□ -2.32
SEMA4AQ9H3S1 Y_RNA.282-201ENST00000364793 102 ntBASIC0.56□□□□□ -2.32
SEMA4AQ9H3S1 SCARNA11.2-201ENST00000517183 154 ntBASIC0.56□□□□□ -2.32
SEMA4AQ9H3S1 Y_RNA.74-201ENST00000362911 99 ntBASIC0.55□□□□□ -2.32
SEMA4AQ9H3S1 MIRLET7B-201ENST00000385140 83 ntBASIC0.55□□□□□ -2.32
SEMA4AQ9H3S1 SNORD116.2-201ENST00000391251 93 ntBASIC0.55□□□□□ -2.32
SEMA4AQ9H3S1 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
SEMA4AQ9H3S1 uc_338.36-201ENST00000622331 158 ntBASIC0.55□□□□□ -2.32
SEMA4AQ9H3S1 MIR643-201ENST00000385267 97 ntBASIC0.54□□□□□ -2.32
SEMA4AQ9H3S1 AC114737.2-201ENST00000421583 173 ntBASIC0.54□□□□□ -2.32
SEMA4AQ9H3S1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 238.3 ms