Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 MIR6788-201ENST00000618842 66 ntBASIC1.54□□□□□ -2.16
NBPF3Q9H094 SNORD114-29-201ENST00000364819 70 ntBASIC1.53□□□□□ -2.16
NBPF3Q9H094 RNU6-782P-201ENST00000516852 104 ntBASIC1.53□□□□□ -2.16
NBPF3Q9H094 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
NBPF3Q9H094 RNU6-939P-201ENST00000384634 107 ntBASIC1.52□□□□□ -2.17
NBPF3Q9H094 AC069271.1-201ENST00000445577 156 ntBASIC1.52□□□□□ -2.17
NBPF3Q9H094 SNORD114-27-201ENST00000363766 70 ntBASIC1.51□□□□□ -2.17
NBPF3Q9H094 RNU4-45P-201ENST00000365469 141 ntBASIC1.51□□□□□ -2.17
NBPF3Q9H094 MIR329-2-201ENST00000385029 84 ntBASIC1.51□□□□□ -2.17
NBPF3Q9H094 MIR548J-201ENST00000408833 112 ntBASIC1.51□□□□□ -2.17
NBPF3Q9H094 RNA5SP222-201ENST00000411039 105 ntBASIC1.51□□□□□ -2.17
NBPF3Q9H094 RNU6-175P-201ENST00000516896 107 ntBASIC1.51□□□□□ -2.17
NBPF3Q9H094 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.5□□□□□ -2.17
NBPF3Q9H094 MIR5706-201ENST00000579841 80 ntBASIC1.5□□□□□ -2.17
NBPF3Q9H094 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.5□□□□□ -2.17
NBPF3Q9H094 RNU6-502P-201ENST00000362419 108 ntBASIC1.49□□□□□ -2.17
NBPF3Q9H094 SNORD114-24-201ENST00000365029 72 ntBASIC1.49□□□□□ -2.17
NBPF3Q9H094 RNU6-1036P-201ENST00000383959 104 ntBASIC1.47□□□□□ -2.17
NBPF3Q9H094 AL353803.5-201ENST00000599815 141 ntBASIC1.47□□□□□ -2.17
NBPF3Q9H094 AL451105.1-201ENST00000450005 189 ntBASIC1.46□□□□□ -2.18
NBPF3Q9H094 RNA5SP517-201ENST00000364724 117 ntBASIC1.45□□□□□ -2.18
NBPF3Q9H094 RNU6-828P-201ENST00000364876 107 ntBASIC1.45□□□□□ -2.18
NBPF3Q9H094 Y_RNA.374-201ENST00000365606 101 ntBASIC1.45□□□□□ -2.18
NBPF3Q9H094 RNU6-995P-201ENST00000391244 107 ntBASIC1.45□□□□□ -2.18
NBPF3Q9H094 RNU6-1262P-201ENST00000516217 96 ntBASIC1.45□□□□□ -2.18
NBPF3Q9H094 SNORA25.18-201ENST00000607153 114 ntBASIC1.45□□□□□ -2.18
NBPF3Q9H094 MIR125B1-201ENST00000385236 88 ntBASIC1.44□□□□□ -2.18
NBPF3Q9H094 MIR618-201ENST00000385287 98 ntBASIC1.44□□□□□ -2.18
NBPF3Q9H094 RNU6-1232P-201ENST00000516299 86 ntBASIC1.44□□□□□ -2.18
NBPF3Q9H094 RNA5SP404-201ENST00000517118 132 ntBASIC1.43□□□□□ -2.18
NBPF3Q9H094 MIR6767-201ENST00000637302 66 ntBASIC1.43□□□□□ -2.18
NBPF3Q9H094 MIR548AA1-201ENST00000384971 97 ntBASIC1.42□□□□□ -2.18
NBPF3Q9H094 RNU6-1267P-201ENST00000410747 107 ntBASIC1.42□□□□□ -2.18
NBPF3Q9H094 ACA64.5-201ENST00000516207 127 ntBASIC1.42□□□□□ -2.18
NBPF3Q9H094 MIR4432-201ENST00000581823 84 ntBASIC1.42□□□□□ -2.18
NBPF3Q9H094 Y_RNA.139-201ENST00000363464 102 ntBASIC1.41□□□□□ -2.18
NBPF3Q9H094 RNU1-124P-201ENST00000363861 145 ntBASIC1.4□□□□□ -2.19
NBPF3Q9H094 RNU6-1204P-201ENST00000363948 107 ntBASIC1.4□□□□□ -2.19
NBPF3Q9H094 RNU6-945P-201ENST00000383947 107 ntBASIC1.4□□□□□ -2.19
NBPF3Q9H094 SNORA36.2-201ENST00000384004 127 ntBASIC1.4□□□□□ -2.19
NBPF3Q9H094 RNU6-696P-201ENST00000390834 107 ntBASIC1.4□□□□□ -2.19
NBPF3Q9H094 RNU6-229P-201ENST00000516614 102 ntBASIC1.4□□□□□ -2.19
NBPF3Q9H094 SNORA2A-201ENST00000383885 135 ntBASIC1.39□□□□□ -2.19
NBPF3Q9H094 Y_RNA.423-201ENST00000384057 113 ntBASIC1.39□□□□□ -2.19
NBPF3Q9H094 MIR4677-201ENST00000584153 80 ntBASIC1.39□□□□□ -2.19
NBPF3Q9H094 AC108676.2-201ENST00000605225 163 ntBASIC1.39□□□□□ -2.19
NBPF3Q9H094 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
NBPF3Q9H094 RNU6-974P-201ENST00000384099 108 ntBASIC1.38□□□□□ -2.19
NBPF3Q9H094 RNU6-1008P-201ENST00000384160 104 ntBASIC1.38□□□□□ -2.19
NBPF3Q9H094 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.38□□□□□ -2.19
NBPF3Q9H094 MIR4295-201ENST00000585286 85 ntBASIC1.38□□□□□ -2.19
NBPF3Q9H094 U7.6-201ENST00000610841 64 ntBASIC1.38□□□□□ -2.19
NBPF3Q9H094 RNU6-822P-201ENST00000362707 106 ntBASIC1.37□□□□□ -2.19
NBPF3Q9H094 MIR501-201ENST00000390204 84 ntBASIC1.37□□□□□ -2.19
NBPF3Q9H094 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.37□□□□□ -2.19
NBPF3Q9H094 RNU6-721P-201ENST00000410155 105 ntBASIC1.37□□□□□ -2.19
NBPF3Q9H094 AC087343.1-201ENST00000477341 475 ntBASIC1.37□□□□□ -2.19
NBPF3Q9H094 RNA5SP436-201ENST00000516020 115 ntBASIC1.37□□□□□ -2.19
NBPF3Q9H094 Y_RNA.698-201ENST00000516798 118 ntBASIC1.37□□□□□ -2.19
NBPF3Q9H094 SNORD115-23-201ENST00000364461 82 ntBASIC1.36□□□□□ -2.19
NBPF3Q9H094 RNU7-88P-201ENST00000458752 63 ntBASIC1.36□□□□□ -2.19
NBPF3Q9H094 AL353765.1-201ENST00000605514 183 ntBASIC1.36□□□□□ -2.19
NBPF3Q9H094 RN7SL660P-201ENST00000614852 299 ntBASIC1.36□□□□□ -2.19
NBPF3Q9H094 U6.103-201ENST00000637085 61 ntBASIC1.36□□□□□ -2.19
NBPF3Q9H094 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
NBPF3Q9H094 U7.5-201ENST00000517224 61 ntBASIC1.35□□□□□ -2.19
NBPF3Q9H094 RN7SL793P-201ENST00000583259 296 ntBASIC1.35□□□□□ -2.19
NBPF3Q9H094 AC084368.1-201ENST00000620935 65 ntBASIC1.35□□□□□ -2.19
NBPF3Q9H094 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.34□□□□□ -2.19
NBPF3Q9H094 MIR140-201ENST00000385282 100 ntBASIC1.33□□□□□ -2.2
NBPF3Q9H094 OR2A41P-201ENST00000473586 105 ntBASIC1.33□□□□□ -2.2
NBPF3Q9H094 AP000676.1-201ENST00000533307 52 ntBASIC1.33□□□□□ -2.2
NBPF3Q9H094 SNORD118-201ENST00000363593 134 ntBASIC1.32□□□□□ -2.2
NBPF3Q9H094 RNU6-742P-201ENST00000365289 107 ntBASIC1.32□□□□□ -2.2
NBPF3Q9H094 MIR29B1-201ENST00000385015 81 ntBASIC1.32□□□□□ -2.2
NBPF3Q9H094 SNORD57-201ENST00000448188 72 ntBASIC1.32□□□□□ -2.2
NBPF3Q9H094 RNU4-54P-201ENST00000516428 129 ntBASIC1.31□□□□□ -2.2
NBPF3Q9H094 MIR5000-201ENST00000577717 103 ntBASIC1.31□□□□□ -2.2
NBPF3Q9H094 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.3□□□□□ -2.2
NBPF3Q9H094 MIR6755-201ENST00000619993 66 ntBASIC1.3□□□□□ -2.2
NBPF3Q9H094 MIR216A-201ENST00000385063 110 ntBASIC1.29□□□□□ -2.2
NBPF3Q9H094 MTRNR2L9-201ENST00000622562 75 ntBASIC1.29□□□□□ -2.2
NBPF3Q9H094 SNORA40.8-201ENST00000411034 126 ntBASIC1.28□□□□□ -2.2
NBPF3Q9H094 RNU6-1174P-201ENST00000517278 101 ntBASIC1.28□□□□□ -2.2
NBPF3Q9H094 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
NBPF3Q9H094 MIR760-201ENST00000390220 80 ntBASIC1.27□□□□□ -2.21
NBPF3Q9H094 AC211469.2-201ENST00000605461 205 ntBASIC1.27□□□□□ -2.21
NBPF3Q9H094 SNORD114-21-201ENST00000606412 72 ntBASIC1.27□□□□□ -2.21
NBPF3Q9H094 MIR6888-201ENST00000621977 67 ntBASIC1.27□□□□□ -2.21
NBPF3Q9H094 snoR1.1-201ENST00000628177 80 ntBASIC1.27□□□□□ -2.21
NBPF3Q9H094 MIR1285-1-201ENST00000408593 84 ntBASIC1.26□□□□□ -2.21
NBPF3Q9H094 SNORD63.1-201ENST00000516178 80 ntBASIC1.26□□□□□ -2.21
NBPF3Q9H094 SNORD63.2-201ENST00000516303 64 ntBASIC1.26□□□□□ -2.21
NBPF3Q9H094 MIR4464-201ENST00000580818 92 ntBASIC1.26□□□□□ -2.21
NBPF3Q9H094 Y_RNA.30-201ENST00000362572 97 ntBASIC1.25□□□□□ -2.21
NBPF3Q9H094 SNORD45.2-201ENST00000363552 72 ntBASIC1.25□□□□□ -2.21
NBPF3Q9H094 MIR3925-201ENST00000584674 77 ntBASIC1.25□□□□□ -2.21
NBPF3Q9H094 MIR373-201ENST00000362273 69 ntBASIC1.24□□□□□ -2.21
NBPF3Q9H094 SNORD71-201ENST00000411292 86 ntBASIC1.24□□□□□ -2.21
NBPF3Q9H094 MIR548H4-201ENST00000408689 111 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms