Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MIR579-201ENST00000385221 98 ntBASIC1.36□□□□□ -2.19
COL25A1Q9BXS0 RNA5SP470-201ENST00000516463 106 ntBASIC1.36□□□□□ -2.19
COL25A1Q9BXS0 CYP3A137P-201ENST00000562436 69 ntBASIC1.36□□□□□ -2.19
COL25A1Q9BXS0 AC211469.2-201ENST00000605461 205 ntBASIC1.36□□□□□ -2.19
COL25A1Q9BXS0 Y_RNA.69-201ENST00000362885 109 ntBASIC1.35□□□□□ -2.19
COL25A1Q9BXS0 SNORD2-201ENST00000459163 69 ntBASIC1.35□□□□□ -2.19
COL25A1Q9BXS0 RNU6-598P-201ENST00000364017 105 ntBASIC1.34□□□□□ -2.19
COL25A1Q9BXS0 SNORA49-201ENST00000386157 136 ntBASIC1.34□□□□□ -2.19
COL25A1Q9BXS0 SNORD124-201ENST00000459577 104 ntBASIC1.34□□□□□ -2.19
COL25A1Q9BXS0 RNU7-151P-201ENST00000516930 53 ntBASIC1.34□□□□□ -2.19
COL25A1Q9BXS0 MIR4752-201ENST00000579672 72 ntBASIC1.34□□□□□ -2.19
COL25A1Q9BXS0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.2
COL25A1Q9BXS0 MIR200A-201ENST00000384875 90 ntBASIC1.33□□□□□ -2.2
COL25A1Q9BXS0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.33□□□□□ -2.2
COL25A1Q9BXS0 RNU6-696P-201ENST00000390834 107 ntBASIC1.33□□□□□ -2.2
COL25A1Q9BXS0 MIR1197-201ENST00000408818 88 ntBASIC1.33□□□□□ -2.2
COL25A1Q9BXS0 AC087343.1-201ENST00000477341 475 ntBASIC1.33□□□□□ -2.2
COL25A1Q9BXS0 RNA5SP94-201ENST00000516917 108 ntBASIC1.33□□□□□ -2.2
COL25A1Q9BXS0 RNU1-29P-201ENST00000606574 126 ntBASIC1.33□□□□□ -2.2
COL25A1Q9BXS0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
COL25A1Q9BXS0 MIR330-201ENST00000362196 94 ntBASIC1.32□□□□□ -2.2
COL25A1Q9BXS0 SNORD48-201ENST00000364953 64 ntBASIC1.32□□□□□ -2.2
COL25A1Q9BXS0 MIR4295-201ENST00000585286 85 ntBASIC1.32□□□□□ -2.2
COL25A1Q9BXS0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
COL25A1Q9BXS0 SNORD26-201ENST00000384147 75 ntBASIC1.31□□□□□ -2.2
COL25A1Q9BXS0 MIRLET7B-201ENST00000385140 83 ntBASIC1.31□□□□□ -2.2
COL25A1Q9BXS0 MIR5706-201ENST00000579841 80 ntBASIC1.31□□□□□ -2.2
COL25A1Q9BXS0 U2.18-201ENST00000622185 84 ntBASIC1.31□□□□□ -2.2
COL25A1Q9BXS0 RNU4-45P-201ENST00000365469 141 ntBASIC1.3□□□□□ -2.2
COL25A1Q9BXS0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
COL25A1Q9BXS0 RNA5SP331-201ENST00000364986 107 ntBASIC1.29□□□□□ -2.2
COL25A1Q9BXS0 RNY1P8-201ENST00000383970 114 ntBASIC1.29□□□□□ -2.2
COL25A1Q9BXS0 RNU6-955P-201ENST00000410497 104 ntBASIC1.29□□□□□ -2.2
COL25A1Q9BXS0 AC011195.1-201ENST00000578177 177 ntBASIC1.29□□□□□ -2.2
COL25A1Q9BXS0 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.29□□□□□ -2.2
COL25A1Q9BXS0 SNORD114-29-201ENST00000364819 70 ntBASIC1.28□□□□□ -2.2
COL25A1Q9BXS0 AL451105.1-201ENST00000450005 189 ntBASIC1.28□□□□□ -2.2
COL25A1Q9BXS0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
COL25A1Q9BXS0 MIR329-2-201ENST00000385029 84 ntBASIC1.27□□□□□ -2.21
COL25A1Q9BXS0 MIR125B1-201ENST00000385236 88 ntBASIC1.27□□□□□ -2.21
COL25A1Q9BXS0 SNORD99-201ENST00000408612 74 ntBASIC1.27□□□□□ -2.21
COL25A1Q9BXS0 RNA5SP255-201ENST00000516370 107 ntBASIC1.27□□□□□ -2.21
COL25A1Q9BXS0 MIR6513-201ENST00000621188 64 ntBASIC1.27□□□□□ -2.21
COL25A1Q9BXS0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
COL25A1Q9BXS0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
COL25A1Q9BXS0 RNU6-502P-201ENST00000362419 108 ntBASIC1.26□□□□□ -2.21
COL25A1Q9BXS0 MIR936-201ENST00000401264 98 ntBASIC1.26□□□□□ -2.21
COL25A1Q9BXS0 RPS29P23-201ENST00000458635 123 ntBASIC1.26□□□□□ -2.21
COL25A1Q9BXS0 RNU6-828P-201ENST00000364876 107 ntBASIC1.25□□□□□ -2.21
COL25A1Q9BXS0 RNU6-782P-201ENST00000516852 104 ntBASIC1.25□□□□□ -2.21
COL25A1Q9BXS0 RNU6-175P-201ENST00000516896 107 ntBASIC1.25□□□□□ -2.21
COL25A1Q9BXS0 RNU7-188P-201ENST00000517063 64 ntBASIC1.25□□□□□ -2.21
COL25A1Q9BXS0 MIR4714-201ENST00000580728 77 ntBASIC1.24□□□□□ -2.21
COL25A1Q9BXS0 MIR2909-201ENST00000617113 69 ntBASIC1.24□□□□□ -2.21
COL25A1Q9BXS0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
COL25A1Q9BXS0 RNU6-1204P-201ENST00000363948 107 ntBASIC1.23□□□□□ -2.21
COL25A1Q9BXS0 SNORD114-24-201ENST00000365029 72 ntBASIC1.23□□□□□ -2.21
COL25A1Q9BXS0 RNU6-1262P-201ENST00000516217 96 ntBASIC1.23□□□□□ -2.21
COL25A1Q9BXS0 RNA5SP285-201ENST00000516619 119 ntBASIC1.23□□□□□ -2.21
COL25A1Q9BXS0 MIR548AA1-201ENST00000384971 97 ntBASIC1.22□□□□□ -2.21
COL25A1Q9BXS0 U6.103-201ENST00000637085 61 ntBASIC1.22□□□□□ -2.21
COL25A1Q9BXS0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.21□□□□□ -2.22
COL25A1Q9BXS0 RNU6-995P-201ENST00000391244 107 ntBASIC1.21□□□□□ -2.22
COL25A1Q9BXS0 AC069271.1-201ENST00000445577 156 ntBASIC1.21□□□□□ -2.22
COL25A1Q9BXS0 AL353803.5-201ENST00000599815 141 ntBASIC1.21□□□□□ -2.22
COL25A1Q9BXS0 RNU6-822P-201ENST00000362707 106 ntBASIC1.2□□□□□ -2.22
COL25A1Q9BXS0 RNU6-945P-201ENST00000383947 107 ntBASIC1.2□□□□□ -2.22
COL25A1Q9BXS0 MIR3973-201ENST00000579824 107 ntBASIC1.2□□□□□ -2.22
COL25A1Q9BXS0 RNU1-124P-201ENST00000363861 145 ntBASIC1.19□□□□□ -2.22
COL25A1Q9BXS0 MIR618-201ENST00000385287 98 ntBASIC1.19□□□□□ -2.22
COL25A1Q9BXS0 RNU6-1267P-201ENST00000410747 107 ntBASIC1.19□□□□□ -2.22
COL25A1Q9BXS0 Y_RNA.139-201ENST00000363464 102 ntBASIC1.18□□□□□ -2.22
COL25A1Q9BXS0 RNU6-1036P-201ENST00000383959 104 ntBASIC1.18□□□□□ -2.22
COL25A1Q9BXS0 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1.18□□□□□ -2.22
COL25A1Q9BXS0 snoU13.19-201ENST00000459148 104 ntBASIC1.18□□□□□ -2.22
COL25A1Q9BXS0 SNORD115-23-201ENST00000364461 82 ntBASIC1.17□□□□□ -2.22
COL25A1Q9BXS0 RNA5SP517-201ENST00000364724 117 ntBASIC1.17□□□□□ -2.22
COL25A1Q9BXS0 RNU6-742P-201ENST00000365289 107 ntBASIC1.17□□□□□ -2.22
COL25A1Q9BXS0 RNA5SP222-201ENST00000411039 105 ntBASIC1.17□□□□□ -2.22
COL25A1Q9BXS0 RNA5SP404-201ENST00000517118 132 ntBASIC1.17□□□□□ -2.22
COL25A1Q9BXS0 U7.6-201ENST00000610841 64 ntBASIC1.17□□□□□ -2.22
COL25A1Q9BXS0 MIR7974-201ENST00000615835 79 ntBASIC1.17□□□□□ -2.22
COL25A1Q9BXS0 MIR26B-201ENST00000362251 77 ntBASIC1.16□□□□□ -2.22
COL25A1Q9BXS0 RNU6-721P-201ENST00000410155 105 ntBASIC1.16□□□□□ -2.22
COL25A1Q9BXS0 RNU6-1232P-201ENST00000516299 86 ntBASIC1.16□□□□□ -2.22
COL25A1Q9BXS0 Y_RNA.698-201ENST00000516798 118 ntBASIC1.16□□□□□ -2.22
COL25A1Q9BXS0 AC108676.2-201ENST00000605225 163 ntBASIC1.16□□□□□ -2.22
COL25A1Q9BXS0 SNORA2A-201ENST00000383885 135 ntBASIC1.15□□□□□ -2.23
COL25A1Q9BXS0 RNU6-974P-201ENST00000384099 108 ntBASIC1.15□□□□□ -2.23
COL25A1Q9BXS0 RNU6-30P-201ENST00000384561 107 ntBASIC1.15□□□□□ -2.23
COL25A1Q9BXS0 MIR29B1-201ENST00000385015 81 ntBASIC1.15□□□□□ -2.23
COL25A1Q9BXS0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.15□□□□□ -2.23
COL25A1Q9BXS0 MIR4677-201ENST00000584153 80 ntBASIC1.15□□□□□ -2.23
COL25A1Q9BXS0 MIR150-201ENST00000385048 84 ntBASIC1.14□□□□□ -2.23
COL25A1Q9BXS0 SNORD57-201ENST00000448188 72 ntBASIC1.14□□□□□ -2.23
COL25A1Q9BXS0 MIR4432-201ENST00000581823 84 ntBASIC1.14□□□□□ -2.23
COL25A1Q9BXS0 SNORD45.2-201ENST00000363552 72 ntBASIC1.13□□□□□ -2.23
COL25A1Q9BXS0 MIR320A-201ENST00000385302 82 ntBASIC1.13□□□□□ -2.23
COL25A1Q9BXS0 RNA5SP193-201ENST00000410353 107 ntBASIC1.13□□□□□ -2.23
COL25A1Q9BXS0 RNU6-229P-201ENST00000516614 102 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms