Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SALL3Q9BXA9 RNU1-141P-201ENST00000364623 158 ntBASIC0.86□□□□□ -2.27
SALL3Q9BXA9 RNU6-726P-201ENST00000364680 107 ntBASIC0.86□□□□□ -2.27
SALL3Q9BXA9 MIR579-201ENST00000385221 98 ntBASIC0.86□□□□□ -2.27
SALL3Q9BXA9 RNU6-337P-201ENST00000391243 106 ntBASIC0.86□□□□□ -2.27
SALL3Q9BXA9 SNORD99-201ENST00000408612 74 ntBASIC0.86□□□□□ -2.27
SALL3Q9BXA9 RNA5SP484-201ENST00000458857 111 ntBASIC0.86□□□□□ -2.27
SALL3Q9BXA9 AC021146.9-201ENST00000512503 156 ntBASIC0.86□□□□□ -2.27
SALL3Q9BXA9 PSMC1P5-201ENST00000512850 177 ntBASIC0.86□□□□□ -2.27
SALL3Q9BXA9 SCARNA16.5-201ENST00000517114 183 ntBASIC0.86□□□□□ -2.27
SALL3Q9BXA9 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.86□□□□□ -2.27
SALL3Q9BXA9 MIR7110-201ENST00000612638 86 ntBASIC0.86□□□□□ -2.27
SALL3Q9BXA9 U2.18-201ENST00000622185 84 ntBASIC0.86□□□□□ -2.27
SALL3Q9BXA9 MIR18A-201ENST00000362310 71 ntBASIC0.85□□□□□ -2.27
SALL3Q9BXA9 Y_RNA.74-201ENST00000362911 99 ntBASIC0.85□□□□□ -2.27
SALL3Q9BXA9 RNU6-598P-201ENST00000364017 105 ntBASIC0.85□□□□□ -2.27
SALL3Q9BXA9 RNU6-59P-201ENST00000384787 107 ntBASIC0.85□□□□□ -2.27
SALL3Q9BXA9 SNORA49-201ENST00000386157 136 ntBASIC0.85□□□□□ -2.27
SALL3Q9BXA9 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.85□□□□□ -2.27
SALL3Q9BXA9 RNU7-119P-201ENST00000459279 63 ntBASIC0.85□□□□□ -2.27
SALL3Q9BXA9 CYP3A54P-201ENST00000566950 75 ntBASIC0.85□□□□□ -2.27
SALL3Q9BXA9 MIR548AL-201ENST00000578416 97 ntBASIC0.85□□□□□ -2.27
SALL3Q9BXA9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
SALL3Q9BXA9 MIR608-201ENST00000384820 100 ntBASIC0.84□□□□□ -2.28
SALL3Q9BXA9 MIR146A-201ENST00000385201 99 ntBASIC0.84□□□□□ -2.28
SALL3Q9BXA9 AL353765.1-201ENST00000605514 183 ntBASIC0.84□□□□□ -2.28
SALL3Q9BXA9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.84□□□□□ -2.28
SALL3Q9BXA9 RNU6-1162P-201ENST00000384443 104 ntBASIC0.83□□□□□ -2.28
SALL3Q9BXA9 RNU6-246P-201ENST00000384702 107 ntBASIC0.83□□□□□ -2.28
SALL3Q9BXA9 AC011195.1-201ENST00000578177 177 ntBASIC0.83□□□□□ -2.28
SALL3Q9BXA9 RNU1-29P-201ENST00000606574 126 ntBASIC0.83□□□□□ -2.28
SALL3Q9BXA9 RNU6-247P-201ENST00000362636 107 ntBASIC0.82□□□□□ -2.28
SALL3Q9BXA9 Y_RNA.206-201ENST00000364136 102 ntBASIC0.82□□□□□ -2.28
SALL3Q9BXA9 Y_RNA.250-201ENST00000364542 110 ntBASIC0.82□□□□□ -2.28
SALL3Q9BXA9 RNU6-742P-201ENST00000365289 107 ntBASIC0.82□□□□□ -2.28
SALL3Q9BXA9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.82□□□□□ -2.28
SALL3Q9BXA9 MIR516B1-201ENST00000385211 90 ntBASIC0.82□□□□□ -2.28
SALL3Q9BXA9 RNU6-518P-201ENST00000516056 96 ntBASIC0.82□□□□□ -2.28
SALL3Q9BXA9 MIR4460-201ENST00000577862 86 ntBASIC0.82□□□□□ -2.28
SALL3Q9BXA9 AC243829.3-201ENST00000622177 108 ntBASIC0.82□□□□□ -2.28
SALL3Q9BXA9 MTRNR2L9-201ENST00000622562 75 ntBASIC0.82□□□□□ -2.28
SALL3Q9BXA9 MIR6866-201ENST00000638146 69 ntBASIC0.82□□□□□ -2.28
SALL3Q9BXA9 Y_RNA.69-201ENST00000362885 109 ntBASIC0.81□□□□□ -2.28
SALL3Q9BXA9 SNORA8.2-201ENST00000384372 139 ntBASIC0.81□□□□□ -2.28
SALL3Q9BXA9 MIR125B1-201ENST00000385236 88 ntBASIC0.81□□□□□ -2.28
SALL3Q9BXA9 RNU6-894P-201ENST00000517094 105 ntBASIC0.81□□□□□ -2.28
SALL3Q9BXA9 AL162376.1-201ENST00000624117 175 ntBASIC0.81□□□□□ -2.28
SALL3Q9BXA9 U6.103-201ENST00000637085 61 ntBASIC0.81□□□□□ -2.28
SALL3Q9BXA9 SNORA63.6-201ENST00000364921 119 ntBASIC0.8□□□□□ -2.28
SALL3Q9BXA9 MIR29B1-201ENST00000385015 81 ntBASIC0.8□□□□□ -2.28
SALL3Q9BXA9 MIR548L-201ENST00000408303 86 ntBASIC0.8□□□□□ -2.28
SALL3Q9BXA9 MIR1255B2-201ENST00000408618 67 ntBASIC0.8□□□□□ -2.28
SALL3Q9BXA9 Y_RNA.698-201ENST00000516798 118 ntBASIC0.8□□□□□ -2.28
SALL3Q9BXA9 RNU7-151P-201ENST00000516930 53 ntBASIC0.8□□□□□ -2.28
SALL3Q9BXA9 MIR6835-201ENST00000621552 64 ntBASIC0.8□□□□□ -2.28
SALL3Q9BXA9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.79□□□□□ -2.28
SALL3Q9BXA9 RNA5SP347-201ENST00000362445 119 ntBASIC0.79□□□□□ -2.28
SALL3Q9BXA9 SNORA36.1-201ENST00000363424 132 ntBASIC0.79□□□□□ -2.28
SALL3Q9BXA9 SCARNA17.3-201ENST00000516381 125 ntBASIC0.79□□□□□ -2.28
SALL3Q9BXA9 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
SALL3Q9BXA9 MIR527-201ENST00000385244 85 ntBASIC0.78□□□□□ -2.28
SALL3Q9BXA9 SNORD111B-201ENST00000408587 80 ntBASIC0.78□□□□□ -2.28
SALL3Q9BXA9 RNU6-1206P-201ENST00000516339 103 ntBASIC0.78□□□□□ -2.28
SALL3Q9BXA9 MIR4653-201ENST00000585107 83 ntBASIC0.78□□□□□ -2.28
SALL3Q9BXA9 SNORA70.25-201ENST00000612741 95 ntBASIC0.78□□□□□ -2.28
SALL3Q9BXA9 SNORA15B-2-201ENST00000384058 135 ntBASIC0.77□□□□□ -2.29
SALL3Q9BXA9 RNU6-458P-201ENST00000384179 107 ntBASIC0.77□□□□□ -2.29
SALL3Q9BXA9 SNORA15B-1-201ENST00000384334 135 ntBASIC0.77□□□□□ -2.29
SALL3Q9BXA9 RNU6-258P-201ENST00000390884 101 ntBASIC0.77□□□□□ -2.29
SALL3Q9BXA9 HMGN2P22-201ENST00000427588 175 ntBASIC0.77□□□□□ -2.29
SALL3Q9BXA9 MIR4752-201ENST00000579672 72 ntBASIC0.77□□□□□ -2.29
SALL3Q9BXA9 MIR4473-201ENST00000583731 91 ntBASIC0.77□□□□□ -2.29
SALL3Q9BXA9 U6.58-201ENST00000613107 107 ntBASIC0.77□□□□□ -2.29
SALL3Q9BXA9 Y_RNA.139-201ENST00000363464 102 ntBASIC0.76□□□□□ -2.29
SALL3Q9BXA9 RNA5SP499-201ENST00000363982 119 ntBASIC0.76□□□□□ -2.29
SALL3Q9BXA9 MIR508-201ENST00000384857 115 ntBASIC0.76□□□□□ -2.29
SALL3Q9BXA9 RNU6-1267P-201ENST00000410747 107 ntBASIC0.76□□□□□ -2.29
SALL3Q9BXA9 RNA5SP268-201ENST00000516828 124 ntBASIC0.76□□□□□ -2.29
SALL3Q9BXA9 MIR5087-201ENST00000635826 76 ntBASIC0.76□□□□□ -2.29
SALL3Q9BXA9 RNU6-822P-201ENST00000362707 106 ntBASIC0.75□□□□□ -2.29
SALL3Q9BXA9 RNU6-110P-201ENST00000384508 104 ntBASIC0.75□□□□□ -2.29
SALL3Q9BXA9 MIR1197-201ENST00000408818 88 ntBASIC0.75□□□□□ -2.29
SALL3Q9BXA9 RNA5SP222-201ENST00000411039 105 ntBASIC0.75□□□□□ -2.29
SALL3Q9BXA9 RNA5SP227-201ENST00000516184 113 ntBASIC0.75□□□□□ -2.29
SALL3Q9BXA9 MIR4711-201ENST00000578274 70 ntBASIC0.75□□□□□ -2.29
SALL3Q9BXA9 MIR6086-201ENST00000638065 55 ntBASIC0.75□□□□□ -2.29
SALL3Q9BXA9 SNORD115-25-201ENST00000362619 82 ntBASIC0.74□□□□□ -2.29
SALL3Q9BXA9 AL021921.1-201ENST00000442774 93 ntBASIC0.74□□□□□ -2.29
SALL3Q9BXA9 RNU6-1232P-201ENST00000516299 86 ntBASIC0.74□□□□□ -2.29
SALL3Q9BXA9 RNU6-175P-201ENST00000516896 107 ntBASIC0.74□□□□□ -2.29
SALL3Q9BXA9 MIR4464-201ENST00000580818 92 ntBASIC0.74□□□□□ -2.29
SALL3Q9BXA9 MIR6773-201ENST00000612812 74 ntBASIC0.74□□□□□ -2.29
SALL3Q9BXA9 RNU6-721P-201ENST00000410155 105 ntBASIC0.73□□□□□ -2.29
SALL3Q9BXA9 AC006210.1-201ENST00000424882 111 ntBASIC0.73□□□□□ -2.29
SALL3Q9BXA9 AL451105.1-201ENST00000450005 189 ntBASIC0.73□□□□□ -2.29
SALL3Q9BXA9 RNU6-1262P-201ENST00000516217 96 ntBASIC0.73□□□□□ -2.29
SALL3Q9BXA9 U6.96-201ENST00000636425 70 ntBASIC0.73□□□□□ -2.29
SALL3Q9BXA9 RNU6-485P-201ENST00000363475 107 ntBASIC0.72□□□□□ -2.29
SALL3Q9BXA9 Y_RNA.407-201ENST00000383986 113 ntBASIC0.72□□□□□ -2.29
SALL3Q9BXA9 MIR7107-201ENST00000611489 80 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 184.5 ms