Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 MIR224-201ENST00000384889 81 ntBASIC-0.38□□□□□ -2.47
NUP88Q99567 RNU6-752P-201ENST00000516376 102 ntBASIC-0.38□□□□□ -2.47
NUP88Q99567 RNA5SP67-201ENST00000516422 131 ntBASIC-0.38□□□□□ -2.47
NUP88Q99567 RNU6-320P-201ENST00000516511 106 ntBASIC-0.38□□□□□ -2.47
NUP88Q99567 MIR5582-201ENST00000579697 68 ntBASIC-0.38□□□□□ -2.47
NUP88Q99567 SNORD115-23-201ENST00000364461 82 ntBASIC-0.39□□□□□ -2.47
NUP88Q99567 RNA5SP331-201ENST00000364986 107 ntBASIC-0.39□□□□□ -2.47
NUP88Q99567 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.39□□□□□ -2.47
NUP88Q99567 MIRLET7B-201ENST00000385140 83 ntBASIC-0.39□□□□□ -2.47
NUP88Q99567 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.39□□□□□ -2.47
NUP88Q99567 RNA5SP169-201ENST00000517268 117 ntBASIC-0.39□□□□□ -2.47
NUP88Q99567 U6.96-201ENST00000636425 70 ntBASIC-0.39□□□□□ -2.47
NUP88Q99567 SNORA2.1-201ENST00000363089 137 ntBASIC-0.4□□□□□ -2.47
NUP88Q99567 RNU6-129P-201ENST00000391022 107 ntBASIC-0.4□□□□□ -2.47
NUP88Q99567 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.4□□□□□ -2.47
NUP88Q99567 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.4□□□□□ -2.47
NUP88Q99567 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.4□□□□□ -2.47
NUP88Q99567 RNA5SP66-201ENST00000517178 101 ntBASIC-0.4□□□□□ -2.47
NUP88Q99567 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
NUP88Q99567 MIR409-201ENST00000362237 79 ntBASIC-0.41□□□□□ -2.48
NUP88Q99567 RNU6-478P-201ENST00000363904 110 ntBASIC-0.41□□□□□ -2.48
NUP88Q99567 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.41□□□□□ -2.48
NUP88Q99567 AC096531.1-201ENST00000419107 107 ntBASIC-0.41□□□□□ -2.48
NUP88Q99567 MIR5704-201ENST00000584029 77 ntBASIC-0.41□□□□□ -2.48
NUP88Q99567 MIR8068-201ENST00000618032 68 ntBASIC-0.41□□□□□ -2.48
NUP88Q99567 MIR494-201ENST00000349529 81 ntBASIC-0.42□□□□□ -2.48
NUP88Q99567 RNA5SP275-201ENST00000363936 118 ntBASIC-0.42□□□□□ -2.48
NUP88Q99567 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.42□□□□□ -2.48
NUP88Q99567 RNU6-973P-201ENST00000364690 107 ntBASIC-0.42□□□□□ -2.48
NUP88Q99567 AC114755.3-201ENST00000481111 251 ntBASIC-0.42□□□□□ -2.48
NUP88Q99567 uc_338.36-201ENST00000622331 158 ntBASIC-0.42□□□□□ -2.48
NUP88Q99567 RNU6-686P-201ENST00000364839 107 ntBASIC-0.43□□□□□ -2.48
NUP88Q99567 SNORA33.1-201ENST00000364957 130 ntBASIC-0.43□□□□□ -2.48
NUP88Q99567 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.43□□□□□ -2.48
NUP88Q99567 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.43□□□□□ -2.48
NUP88Q99567 RNU6-380P-201ENST00000410207 107 ntBASIC-0.43□□□□□ -2.48
NUP88Q99567 AL445193.1-201ENST00000441183 141 ntBASIC-0.43□□□□□ -2.48
NUP88Q99567 RNU6-557P-201ENST00000516842 110 ntBASIC-0.43□□□□□ -2.48
NUP88Q99567 MIR5588-201ENST00000581890 63 ntBASIC-0.43□□□□□ -2.48
NUP88Q99567 snoR1.1-201ENST00000628177 80 ntBASIC-0.43□□□□□ -2.48
NUP88Q99567 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.44□□□□□ -2.48
NUP88Q99567 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.44□□□□□ -2.48
NUP88Q99567 MIR450A2-201ENST00000385022 100 ntBASIC-0.44□□□□□ -2.48
NUP88Q99567 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.44□□□□□ -2.48
NUP88Q99567 RNA5SP170-201ENST00000517150 101 ntBASIC-0.44□□□□□ -2.48
NUP88Q99567 AL391099.1-201ENST00000624635 187 ntBASIC-0.44□□□□□ -2.48
NUP88Q99567 SNORD38.3-201ENST00000516599 73 ntBASIC-0.45□□□□□ -2.48
NUP88Q99567 MIR4432-201ENST00000581823 84 ntBASIC-0.45□□□□□ -2.48
NUP88Q99567 MIR6851-201ENST00000617060 67 ntBASIC-0.45□□□□□ -2.48
NUP88Q99567 AC093726.3-201ENST00000637588 150 ntBASIC-0.45□□□□□ -2.48
NUP88Q99567 RNU6-330P-201ENST00000363015 107 ntBASIC-0.46□□□□□ -2.48
NUP88Q99567 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.46□□□□□ -2.48
NUP88Q99567 RNU6-242P-201ENST00000384359 107 ntBASIC-0.46□□□□□ -2.48
NUP88Q99567 MIR196A2-201ENST00000385189 110 ntBASIC-0.46□□□□□ -2.48
NUP88Q99567 SNORD126-201ENST00000459475 77 ntBASIC-0.46□□□□□ -2.48
NUP88Q99567 AC022137.1-201ENST00000483735 151 ntBASIC-0.46□□□□□ -2.48
NUP88Q99567 SNORD14C-201ENST00000365382 88 ntBASIC-0.47□□□□□ -2.48
NUP88Q99567 RNU6-303P-201ENST00000517091 106 ntBASIC-0.47□□□□□ -2.48
NUP88Q99567 MIR4464-201ENST00000580818 92 ntBASIC-0.48□□□□□ -2.49
NUP88Q99567 MIR6739-201ENST00000622461 75 ntBASIC-0.48□□□□□ -2.49
NUP88Q99567 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.49□□□□□ -2.49
NUP88Q99567 MIR521-2-201ENST00000384818 87 ntBASIC-0.49□□□□□ -2.49
NUP88Q99567 AC074348.1-201ENST00000426503 132 ntBASIC-0.5□□□□□ -2.49
NUP88Q99567 MIR548AX-201ENST00000580117 73 ntBASIC-0.5□□□□□ -2.49
NUP88Q99567 RNU6-979P-201ENST00000383896 107 ntBASIC-0.51□□□□□ -2.49
NUP88Q99567 SNORA32.3-201ENST00000384772 121 ntBASIC-0.51□□□□□ -2.49
NUP88Q99567 RNA5SP266-201ENST00000410273 108 ntBASIC-0.51□□□□□ -2.49
NUP88Q99567 MIR548AZ-201ENST00000616567 95 ntBASIC-0.51□□□□□ -2.49
NUP88Q99567 RNU6-284P-201ENST00000411105 106 ntBASIC-0.52□□□□□ -2.49
NUP88Q99567 RNU6-656P-201ENST00000516785 107 ntBASIC-0.52□□□□□ -2.49
NUP88Q99567 RNU6-807P-201ENST00000516805 107 ntBASIC-0.52□□□□□ -2.49
NUP88Q99567 MIR4436A-201ENST00000585278 85 ntBASIC-0.52□□□□□ -2.49
NUP88Q99567 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.53□□□□□ -2.49
NUP88Q99567 SNORA8.1-201ENST00000384250 140 ntBASIC-0.53□□□□□ -2.49
NUP88Q99567 MIR204-201ENST00000385200 110 ntBASIC-0.53□□□□□ -2.49
NUP88Q99567 CYP3A54P-201ENST00000566950 75 ntBASIC-0.53□□□□□ -2.49
NUP88Q99567 MIR4484-201ENST00000582855 83 ntBASIC-0.53□□□□□ -2.49
NUP88Q99567 MIR3675-201ENST00000583661 73 ntBASIC-0.53□□□□□ -2.49
NUP88Q99567 MIR6854-201ENST00000614935 69 ntBASIC-0.53□□□□□ -2.49
NUP88Q99567 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.54□□□□□ -2.5
NUP88Q99567 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.54□□□□□ -2.5
NUP88Q99567 MIR1255B2-201ENST00000408618 67 ntBASIC-0.55□□□□□ -2.5
NUP88Q99567 RNU6-721P-201ENST00000410155 105 ntBASIC-0.55□□□□□ -2.5
NUP88Q99567 RNU4-63P-201ENST00000411313 118 ntBASIC-0.55□□□□□ -2.5
NUP88Q99567 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.55□□□□□ -2.5
NUP88Q99567 AL353803.5-201ENST00000599815 141 ntBASIC-0.55□□□□□ -2.5
NUP88Q99567 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.56□□□□□ -2.5
NUP88Q99567 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.56□□□□□ -2.5
NUP88Q99567 RNU7-171P-201ENST00000459581 62 ntBASIC-0.56□□□□□ -2.5
NUP88Q99567 RNA5SP470-201ENST00000516463 106 ntBASIC-0.56□□□□□ -2.5
NUP88Q99567 RNU6-881P-201ENST00000516813 102 ntBASIC-0.56□□□□□ -2.5
NUP88Q99567 MIR548AG1-201ENST00000579932 66 ntBASIC-0.56□□□□□ -2.5
NUP88Q99567 MIR6888-201ENST00000621977 67 ntBASIC-0.56□□□□□ -2.5
NUP88Q99567 MIR1297-201ENST00000637311 77 ntBASIC-0.56□□□□□ -2.5
NUP88Q99567 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.57□□□□□ -2.5
NUP88Q99567 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.57□□□□□ -2.5
NUP88Q99567 SNORD75.1-201ENST00000408373 60 ntBASIC-0.57□□□□□ -2.5
NUP88Q99567 SNORD57-201ENST00000448188 72 ntBASIC-0.57□□□□□ -2.5
NUP88Q99567 RNU6-315P-201ENST00000362666 107 ntBASIC-0.58□□□□□ -2.5
NUP88Q99567 SNORA62.4-201ENST00000365504 151 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 238.9 ms