Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 U4.4-201ENST00000620626 117 ntBASIC1.13□□□□□ -2.23
PHOX2BQ99453 Y_RNA.236-201ENST00000364427 111 ntBASIC1.12□□□□□ -2.23
PHOX2BQ99453 Y_RNA.423-201ENST00000384057 113 ntBASIC1.12□□□□□ -2.23
PHOX2BQ99453 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
PHOX2BQ99453 VTRNA1-3-201ENST00000365645 89 ntBASIC1.11□□□□□ -2.23
PHOX2BQ99453 MIR936-201ENST00000401264 98 ntBASIC1.11□□□□□ -2.23
PHOX2BQ99453 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.1□□□□□ -2.23
PHOX2BQ99453 RNU6-520P-201ENST00000384717 104 ntBASIC1.1□□□□□ -2.23
PHOX2BQ99453 MIR6513-201ENST00000621188 64 ntBASIC1.1□□□□□ -2.23
PHOX2BQ99453 AC243829.3-201ENST00000622177 108 ntBASIC1.1□□□□□ -2.23
PHOX2BQ99453 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.1□□□□□ -2.23
PHOX2BQ99453 SNORA75.1-201ENST00000391130 148 ntBASIC1.09□□□□□ -2.23
PHOX2BQ99453 RNA5SP470-201ENST00000516463 106 ntBASIC1.09□□□□□ -2.23
PHOX2BQ99453 MIR2909-201ENST00000617113 69 ntBASIC1.09□□□□□ -2.23
PHOX2BQ99453 AC084368.1-201ENST00000620935 65 ntBASIC1.09□□□□□ -2.23
PHOX2BQ99453 RNU6-518P-201ENST00000516056 96 ntBASIC1.08□□□□□ -2.24
PHOX2BQ99453 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
PHOX2BQ99453 MIR330-201ENST00000362196 94 ntBASIC1.07□□□□□ -2.24
PHOX2BQ99453 RNU7-188P-201ENST00000517063 64 ntBASIC1.07□□□□□ -2.24
PHOX2BQ99453 MIR4677-201ENST00000584153 80 ntBASIC1.07□□□□□ -2.24
PHOX2BQ99453 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.06□□□□□ -2.24
PHOX2BQ99453 RNU7-119P-201ENST00000459279 63 ntBASIC1.06□□□□□ -2.24
PHOX2BQ99453 MIR548AD-201ENST00000584780 82 ntBASIC1.06□□□□□ -2.24
PHOX2BQ99453 Y_RNA.74-201ENST00000362911 99 ntBASIC1.05□□□□□ -2.24
PHOX2BQ99453 PSMC1P5-201ENST00000512850 177 ntBASIC1.05□□□□□ -2.24
PHOX2BQ99453 MIR4698-201ENST00000577795 80 ntBASIC1.05□□□□□ -2.24
PHOX2BQ99453 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
PHOX2BQ99453 MIR1255B2-201ENST00000408618 67 ntBASIC1.04□□□□□ -2.24
PHOX2BQ99453 SNORD114-21-201ENST00000606412 72 ntBASIC1.04□□□□□ -2.24
PHOX2BQ99453 MIR760-201ENST00000390220 80 ntBASIC1.03□□□□□ -2.24
PHOX2BQ99453 RNA5SP193-201ENST00000410353 107 ntBASIC1.03□□□□□ -2.24
PHOX2BQ99453 RNU7-154P-201ENST00000516194 62 ntBASIC1.03□□□□□ -2.24
PHOX2BQ99453 Y_RNA.325-201ENST00000365171 122 ntBASIC1.02□□□□□ -2.25
PHOX2BQ99453 RNA5SP128-201ENST00000365305 116 ntBASIC1.02□□□□□ -2.25
PHOX2BQ99453 MIR6773-201ENST00000612812 74 ntBASIC1.02□□□□□ -2.25
PHOX2BQ99453 RNU6-446P-201ENST00000362827 106 ntBASIC1.01□□□□□ -2.25
PHOX2BQ99453 MIR501-201ENST00000390204 84 ntBASIC1.01□□□□□ -2.25
PHOX2BQ99453 RNU6-808P-201ENST00000391233 108 ntBASIC1.01□□□□□ -2.25
PHOX2BQ99453 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
PHOX2BQ99453 MIR429-201ENST00000362106 83 ntBASIC1□□□□□ -2.25
PHOX2BQ99453 MIR532-201ENST00000385025 91 ntBASIC1□□□□□ -2.25
PHOX2BQ99453 MIR6755-201ENST00000619993 66 ntBASIC1□□□□□ -2.25
PHOX2BQ99453 SNORA9.1-201ENST00000362412 131 ntBASIC0.99□□□□□ -2.25
PHOX2BQ99453 RNU4-54P-201ENST00000516428 129 ntBASIC0.99□□□□□ -2.25
PHOX2BQ99453 MIR4653-201ENST00000585107 83 ntBASIC0.99□□□□□ -2.25
PHOX2BQ99453 RNU4-38P-201ENST00000364472 129 ntBASIC0.98□□□□□ -2.25
PHOX2BQ99453 MIR519A2-201ENST00000384990 87 ntBASIC0.98□□□□□ -2.25
PHOX2BQ99453 RNU6-175P-201ENST00000516896 107 ntBASIC0.98□□□□□ -2.25
PHOX2BQ99453 Y_RNA.722-201ENST00000517279 114 ntBASIC0.98□□□□□ -2.25
PHOX2BQ99453 MIR6857-201ENST00000613267 93 ntBASIC0.98□□□□□ -2.25
PHOX2BQ99453 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
PHOX2BQ99453 SNORD116-16-201ENST00000384533 92 ntBASIC0.97□□□□□ -2.25
PHOX2BQ99453 MIR527-201ENST00000385244 85 ntBASIC0.97□□□□□ -2.25
PHOX2BQ99453 SNORD115-25-201ENST00000362619 82 ntBASIC0.96□□□□□ -2.26
PHOX2BQ99453 MIR876-201ENST00000401147 81 ntBASIC0.96□□□□□ -2.26
PHOX2BQ99453 RNU6-1232P-201ENST00000516299 86 ntBASIC0.96□□□□□ -2.26
PHOX2BQ99453 AC090617.8-201ENST00000623339 167 ntBASIC0.96□□□□□ -2.26
PHOX2BQ99453 SNORA41B-201ENST00000384785 128 ntBASIC0.95□□□□□ -2.26
PHOX2BQ99453 RNU6-337P-201ENST00000391243 106 ntBASIC0.95□□□□□ -2.26
PHOX2BQ99453 RNU6-1036P-201ENST00000383959 104 ntBASIC0.94□□□□□ -2.26
PHOX2BQ99453 MIR4711-201ENST00000578274 70 ntBASIC0.94□□□□□ -2.26
PHOX2BQ99453 MIRLET7B-201ENST00000385140 83 ntBASIC0.93□□□□□ -2.26
PHOX2BQ99453 SNORA49-201ENST00000386157 136 ntBASIC0.93□□□□□ -2.26
PHOX2BQ99453 RNA5SP285-201ENST00000516619 119 ntBASIC0.93□□□□□ -2.26
PHOX2BQ99453 RNU6-502P-201ENST00000362419 108 ntBASIC0.92□□□□□ -2.26
PHOX2BQ99453 MIR106A-201ENST00000384870 81 ntBASIC0.92□□□□□ -2.26
PHOX2BQ99453 Y_RNA.282-201ENST00000364793 102 ntBASIC0.91□□□□□ -2.26
PHOX2BQ99453 RNU6-1246P-201ENST00000391064 107 ntBASIC0.9□□□□□ -2.27
PHOX2BQ99453 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.9□□□□□ -2.27
PHOX2BQ99453 SNORD44.1-201ENST00000363202 61 ntBASIC0.89□□□□□ -2.27
PHOX2BQ99453 RNU6-945P-201ENST00000383947 107 ntBASIC0.89□□□□□ -2.27
PHOX2BQ99453 RNU7-129P-201ENST00000516128 62 ntBASIC0.89□□□□□ -2.27
PHOX2BQ99453 RNU6-782P-201ENST00000516852 104 ntBASIC0.89□□□□□ -2.27
PHOX2BQ99453 MIR4636-201ENST00000582271 80 ntBASIC0.89□□□□□ -2.27
PHOX2BQ99453 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
PHOX2BQ99453 RNU6-246P-201ENST00000384702 107 ntBASIC0.88□□□□□ -2.27
PHOX2BQ99453 RPL39P28-201ENST00000465655 155 ntBASIC0.88□□□□□ -2.27
PHOX2BQ99453 RNU6-231P-201ENST00000517122 103 ntBASIC0.88□□□□□ -2.27
PHOX2BQ99453 MIR508-201ENST00000384857 115 ntBASIC0.87□□□□□ -2.27
PHOX2BQ99453 RN7SL660P-201ENST00000614852 299 ntBASIC0.87□□□□□ -2.27
PHOX2BQ99453 MIR499B-201ENST00000636498 73 ntBASIC0.87□□□□□ -2.27
PHOX2BQ99453 MIR3925-201ENST00000584674 77 ntBASIC0.86□□□□□ -2.27
PHOX2BQ99453 SCARNA11.2-201ENST00000517183 154 ntBASIC0.85□□□□□ -2.27
PHOX2BQ99453 MIR7110-201ENST00000612638 86 ntBASIC0.85□□□□□ -2.27
PHOX2BQ99453 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
PHOX2BQ99453 RNA5SP331-201ENST00000364986 107 ntBASIC0.84□□□□□ -2.27
PHOX2BQ99453 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.84□□□□□ -2.27
PHOX2BQ99453 uc_338.17-201ENST00000619633 179 ntBASIC0.84□□□□□ -2.27
PHOX2BQ99453 MIR6835-201ENST00000621552 64 ntBASIC0.84□□□□□ -2.27
PHOX2BQ99453 RNA5SP98-201ENST00000363158 137 ntBASIC0.83□□□□□ -2.28
PHOX2BQ99453 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.83□□□□□ -2.28
PHOX2BQ99453 SNORD113-4-201ENST00000364802 75 ntBASIC0.82□□□□□ -2.28
PHOX2BQ99453 RNU6-936P-201ENST00000384005 107 ntBASIC0.82□□□□□ -2.28
PHOX2BQ99453 RNU6-1184P-201ENST00000384588 108 ntBASIC0.82□□□□□ -2.28
PHOX2BQ99453 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.82□□□□□ -2.28
PHOX2BQ99453 MIR7978-201ENST00000636158 59 ntBASIC0.82□□□□□ -2.28
PHOX2BQ99453 snoR1.1-201ENST00000628177 80 ntBASIC0.81□□□□□ -2.28
PHOX2BQ99453 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
PHOX2BQ99453 MIR6759-201ENST00000638110 65 ntBASIC0.8□□□□□ -2.28
PHOX2BQ99453 RNU6-1312P-201ENST00000362425 108 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 221.1 ms