Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
IFT43Q96FT9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.78□□□□□ -2.28
IFT43Q96FT9 MIR1255B2-201ENST00000408618 67 ntBASIC0.78□□□□□ -2.28
IFT43Q96FT9 RNU6-518P-201ENST00000516056 96 ntBASIC0.78□□□□□ -2.28
IFT43Q96FT9 SNORD44.1-201ENST00000363202 61 ntBASIC0.77□□□□□ -2.29
IFT43Q96FT9 SNORD114-26-201ENST00000363543 72 ntBASIC0.77□□□□□ -2.29
IFT43Q96FT9 MIR6773-201ENST00000612812 74 ntBASIC0.77□□□□□ -2.29
IFT43Q96FT9 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.77□□□□□ -2.29
IFT43Q96FT9 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
IFT43Q96FT9 Y_RNA.325-201ENST00000365171 122 ntBASIC0.76□□□□□ -2.29
IFT43Q96FT9 RNU6-337P-201ENST00000391243 106 ntBASIC0.76□□□□□ -2.29
IFT43Q96FT9 RNA5SP480-201ENST00000516840 109 ntBASIC0.76□□□□□ -2.29
IFT43Q96FT9 Y_RNA.74-201ENST00000362911 99 ntBASIC0.75□□□□□ -2.29
IFT43Q96FT9 Y_RNA.236-201ENST00000364427 111 ntBASIC0.75□□□□□ -2.29
IFT43Q96FT9 SNORA49-201ENST00000386157 136 ntBASIC0.75□□□□□ -2.29
IFT43Q96FT9 MIR6835-201ENST00000621552 64 ntBASIC0.75□□□□□ -2.29
IFT43Q96FT9 SNORA9.1-201ENST00000362412 131 ntBASIC0.74□□□□□ -2.29
IFT43Q96FT9 RNU6-1036P-201ENST00000383959 104 ntBASIC0.74□□□□□ -2.29
IFT43Q96FT9 MIR519A2-201ENST00000384990 87 ntBASIC0.74□□□□□ -2.29
IFT43Q96FT9 RNA5SP470-201ENST00000516463 106 ntBASIC0.74□□□□□ -2.29
IFT43Q96FT9 MIR4714-201ENST00000580728 77 ntBASIC0.74□□□□□ -2.29
IFT43Q96FT9 MIR876-201ENST00000401147 81 ntBASIC0.73□□□□□ -2.29
IFT43Q96FT9 MIR3925-201ENST00000584674 77 ntBASIC0.73□□□□□ -2.29
IFT43Q96FT9 MIR499B-201ENST00000636498 73 ntBASIC0.73□□□□□ -2.29
IFT43Q96FT9 RNU6-446P-201ENST00000362827 106 ntBASIC0.72□□□□□ -2.29
IFT43Q96FT9 RNU7-129P-201ENST00000516128 62 ntBASIC0.72□□□□□ -2.29
IFT43Q96FT9 RN7SL660P-201ENST00000614852 299 ntBASIC0.72□□□□□ -2.29
IFT43Q96FT9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
IFT43Q96FT9 RNU7-154P-201ENST00000516194 62 ntBASIC0.71□□□□□ -2.3
IFT43Q96FT9 RNA5SP121-201ENST00000516537 101 ntBASIC0.71□□□□□ -2.3
IFT43Q96FT9 MIR6513-201ENST00000621188 64 ntBASIC0.71□□□□□ -2.3
IFT43Q96FT9 RNU6-502P-201ENST00000362419 108 ntBASIC0.7□□□□□ -2.3
IFT43Q96FT9 MIRLET7B-201ENST00000385140 83 ntBASIC0.7□□□□□ -2.3
IFT43Q96FT9 RNU6-141P-201ENST00000410499 105 ntBASIC0.7□□□□□ -2.3
IFT43Q96FT9 RNA5SP436-201ENST00000516020 115 ntBASIC0.7□□□□□ -2.3
IFT43Q96FT9 SNORD115-25-201ENST00000362619 82 ntBASIC0.69□□□□□ -2.3
IFT43Q96FT9 SNORA41B-201ENST00000384785 128 ntBASIC0.69□□□□□ -2.3
IFT43Q96FT9 MIR508-201ENST00000384857 115 ntBASIC0.69□□□□□ -2.3
IFT43Q96FT9 RNU6-1246P-201ENST00000391064 107 ntBASIC0.69□□□□□ -2.3
IFT43Q96FT9 SNORA68.3-201ENST00000515906 83 ntBASIC0.69□□□□□ -2.3
IFT43Q96FT9 RNU6-520P-201ENST00000384717 104 ntBASIC0.68□□□□□ -2.3
IFT43Q96FT9 MIR106A-201ENST00000384870 81 ntBASIC0.68□□□□□ -2.3
IFT43Q96FT9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.68□□□□□ -2.3
IFT43Q96FT9 MIR527-201ENST00000385244 85 ntBASIC0.67□□□□□ -2.3
IFT43Q96FT9 SCARNA11.2-201ENST00000517183 154 ntBASIC0.67□□□□□ -2.3
IFT43Q96FT9 RN7SL793P-201ENST00000583259 296 ntBASIC0.67□□□□□ -2.3
IFT43Q96FT9 MIR103A1-201ENST00000362165 78 ntBASIC0.66□□□□□ -2.3
IFT43Q96FT9 SNORD116-16-201ENST00000384533 92 ntBASIC0.66□□□□□ -2.3
IFT43Q96FT9 RNU6-782P-201ENST00000516852 104 ntBASIC0.66□□□□□ -2.3
IFT43Q96FT9 MIRLET7D-201ENST00000362263 87 ntBASIC0.65□□□□□ -2.31
IFT43Q96FT9 Y_RNA.282-201ENST00000364793 102 ntBASIC0.65□□□□□ -2.31
IFT43Q96FT9 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.65□□□□□ -2.31
IFT43Q96FT9 RNU7-119P-201ENST00000459279 63 ntBASIC0.65□□□□□ -2.31
IFT43Q96FT9 RNA5SP347-201ENST00000362445 119 ntBASIC0.64□□□□□ -2.31
IFT43Q96FT9 MIR216A-201ENST00000385063 110 ntBASIC0.64□□□□□ -2.31
IFT43Q96FT9 MIR936-201ENST00000401264 98 ntBASIC0.63□□□□□ -2.31
IFT43Q96FT9 uc_338.17-201ENST00000619633 179 ntBASIC0.63□□□□□ -2.31
IFT43Q96FT9 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.62□□□□□ -2.31
IFT43Q96FT9 MIR429-201ENST00000362106 83 ntBASIC0.61□□□□□ -2.31
IFT43Q96FT9 AP000676.1-201ENST00000533307 52 ntBASIC0.6□□□□□ -2.31
IFT43Q96FT9 RNA5SP98-201ENST00000363158 137 ntBASIC0.59□□□□□ -2.31
IFT43Q96FT9 RNU6-815P-201ENST00000384080 113 ntBASIC0.59□□□□□ -2.31
IFT43Q96FT9 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
IFT43Q96FT9 RNU6-127P-201ENST00000390897 107 ntBASIC0.59□□□□□ -2.31
IFT43Q96FT9 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.59□□□□□ -2.31
IFT43Q96FT9 RNU6-231P-201ENST00000517122 103 ntBASIC0.59□□□□□ -2.31
IFT43Q96FT9 MIR4711-201ENST00000578274 70 ntBASIC0.59□□□□□ -2.31
IFT43Q96FT9 MIR6779-201ENST00000617283 64 ntBASIC0.59□□□□□ -2.31
IFT43Q96FT9 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
IFT43Q96FT9 RNA5SP62-201ENST00000363457 110 ntBASIC0.58□□□□□ -2.32
IFT43Q96FT9 SNORD113-4-201ENST00000364802 75 ntBASIC0.58□□□□□ -2.32
IFT43Q96FT9 RNU6-246P-201ENST00000384702 107 ntBASIC0.58□□□□□ -2.32
IFT43Q96FT9 AC108740.1-201ENST00000498629 225 ntBASIC0.58□□□□□ -2.32
IFT43Q96FT9 Y_RNA.722-201ENST00000517279 114 ntBASIC0.57□□□□□ -2.32
IFT43Q96FT9 AL353803.5-201ENST00000599815 141 ntBASIC0.57□□□□□ -2.32
IFT43Q96FT9 SNORD114-23-201ENST00000363536 72 ntBASIC0.56□□□□□ -2.32
IFT43Q96FT9 RNA5SP193-201ENST00000410353 107 ntBASIC0.56□□□□□ -2.32
IFT43Q96FT9 snoR1.1-201ENST00000628177 80 ntBASIC0.56□□□□□ -2.32
IFT43Q96FT9 AC010487.4-201ENST00000637027 61 ntBASIC0.56□□□□□ -2.32
IFT43Q96FT9 AC090625.1-201ENST00000357130 210 ntBASIC0.55□□□□□ -2.32
IFT43Q96FT9 SNORD115-23-201ENST00000364461 82 ntBASIC0.55□□□□□ -2.32
IFT43Q96FT9 RNU6-808P-201ENST00000391233 108 ntBASIC0.55□□□□□ -2.32
IFT43Q96FT9 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.55□□□□□ -2.32
IFT43Q96FT9 AC069113.3-201ENST00000521019 150 ntBASIC0.55□□□□□ -2.32
IFT43Q96FT9 MIR548AG1-201ENST00000579932 66 ntBASIC0.55□□□□□ -2.32
IFT43Q96FT9 MIR7978-201ENST00000636158 59 ntBASIC0.54□□□□□ -2.32
IFT43Q96FT9 RNU6-1312P-201ENST00000362425 108 ntBASIC0.53□□□□□ -2.32
IFT43Q96FT9 MIR7110-201ENST00000612638 86 ntBASIC0.53□□□□□ -2.32
IFT43Q96FT9 Y_RNA.109-201ENST00000363215 102 ntBASIC0.52□□□□□ -2.33
IFT43Q96FT9 RNA5SP499-201ENST00000363982 119 ntBASIC0.52□□□□□ -2.33
IFT43Q96FT9 RNU6-458P-201ENST00000384179 107 ntBASIC0.52□□□□□ -2.33
IFT43Q96FT9 MIR193B-201ENST00000384907 83 ntBASIC0.52□□□□□ -2.33
IFT43Q96FT9 U6.58-201ENST00000613107 107 ntBASIC0.52□□□□□ -2.33
IFT43Q96FT9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.52□□□□□ -2.33
IFT43Q96FT9 MIR643-201ENST00000385267 97 ntBASIC0.51□□□□□ -2.33
IFT43Q96FT9 SNORD116.2-201ENST00000391251 93 ntBASIC0.51□□□□□ -2.33
IFT43Q96FT9 MIR4432-201ENST00000581823 84 ntBASIC0.51□□□□□ -2.33
IFT43Q96FT9 MIR5087-201ENST00000635826 76 ntBASIC0.51□□□□□ -2.33
IFT43Q96FT9 RNU6-1327P-201ENST00000365302 105 ntBASIC0.5□□□□□ -2.33
IFT43Q96FT9 MIR892B-201ENST00000401279 77 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 191.1 ms