Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNU6-129P-201ENST00000391022 107 ntBASIC-0.54□□□□□ -2.5
CHMP4CQ96CF2 AL590491.3-201ENST00000610731 82 ntBASIC-0.54□□□□□ -2.5
CHMP4CQ96CF2 snoR1.1-201ENST00000628177 80 ntBASIC-0.54□□□□□ -2.5
CHMP4CQ96CF2 RNU6-686P-201ENST00000364839 107 ntBASIC-0.55□□□□□ -2.5
CHMP4CQ96CF2 AL445193.1-201ENST00000441183 141 ntBASIC-0.55□□□□□ -2.5
CHMP4CQ96CF2 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.55□□□□□ -2.5
CHMP4CQ96CF2 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.56□□□□□ -2.5
CHMP4CQ96CF2 RNU6-294P-201ENST00000364999 102 ntBASIC-0.56□□□□□ -2.5
CHMP4CQ96CF2 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.56□□□□□ -2.5
CHMP4CQ96CF2 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.56□□□□□ -2.5
CHMP4CQ96CF2 AC096531.1-201ENST00000419107 107 ntBASIC-0.56□□□□□ -2.5
CHMP4CQ96CF2 uc_338.36-201ENST00000622331 158 ntBASIC-0.56□□□□□ -2.5
CHMP4CQ96CF2 SNORD95.1-201ENST00000364099 68 ntBASIC-0.57□□□□□ -2.5
CHMP4CQ96CF2 RNU6-973P-201ENST00000364690 107 ntBASIC-0.57□□□□□ -2.5
CHMP4CQ96CF2 RNU6-380P-201ENST00000410207 107 ntBASIC-0.57□□□□□ -2.5
CHMP4CQ96CF2 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.57□□□□□ -2.5
CHMP4CQ96CF2 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.57□□□□□ -2.5
CHMP4CQ96CF2 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.58□□□□□ -2.5
CHMP4CQ96CF2 RNU6-303P-201ENST00000517091 106 ntBASIC-0.58□□□□□ -2.5
CHMP4CQ96CF2 MIR5588-201ENST00000581890 63 ntBASIC-0.58□□□□□ -2.5
CHMP4CQ96CF2 AL391099.1-201ENST00000624635 187 ntBASIC-0.58□□□□□ -2.5
CHMP4CQ96CF2 AC093726.3-201ENST00000637588 150 ntBASIC-0.58□□□□□ -2.5
CHMP4CQ96CF2 MIRLET7B-201ENST00000385140 83 ntBASIC-0.59□□□□□ -2.5
CHMP4CQ96CF2 MIR5582-201ENST00000579697 68 ntBASIC-0.59□□□□□ -2.5
CHMP4CQ96CF2 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.6□□□□□ -2.51
CHMP4CQ96CF2 SNORD56B-201ENST00000384713 71 ntBASIC-0.6□□□□□ -2.51
CHMP4CQ96CF2 MIR224-201ENST00000384889 81 ntBASIC-0.6□□□□□ -2.51
CHMP4CQ96CF2 MIR196A2-201ENST00000385189 110 ntBASIC-0.6□□□□□ -2.51
CHMP4CQ96CF2 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.61□□□□□ -2.51
CHMP4CQ96CF2 RNU6-337P-201ENST00000391243 106 ntBASIC-0.61□□□□□ -2.51
CHMP4CQ96CF2 SNORD126-201ENST00000459475 77 ntBASIC-0.61□□□□□ -2.51
CHMP4CQ96CF2 SNORD114-11-201ENST00000363738 75 ntBASIC-0.62□□□□□ -2.51
CHMP4CQ96CF2 SNORA33.1-201ENST00000364957 130 ntBASIC-0.62□□□□□ -2.51
CHMP4CQ96CF2 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.62□□□□□ -2.51
CHMP4CQ96CF2 MIR450A2-201ENST00000385022 100 ntBASIC-0.62□□□□□ -2.51
CHMP4CQ96CF2 MIR548AZ-201ENST00000616567 95 ntBASIC-0.62□□□□□ -2.51
CHMP4CQ96CF2 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.63□□□□□ -2.51
CHMP4CQ96CF2 RNU6-478P-201ENST00000363904 110 ntBASIC-0.63□□□□□ -2.51
CHMP4CQ96CF2 MIR494-201ENST00000349529 81 ntBASIC-0.64□□□□□ -2.51
CHMP4CQ96CF2 RNU6-979P-201ENST00000383896 107 ntBASIC-0.64□□□□□ -2.51
CHMP4CQ96CF2 MIR4432-201ENST00000581823 84 ntBASIC-0.64□□□□□ -2.51
CHMP4CQ96CF2 SNORD14C-201ENST00000365382 88 ntBASIC-0.65□□□□□ -2.51
CHMP4CQ96CF2 RNU6-242P-201ENST00000384359 107 ntBASIC-0.65□□□□□ -2.51
CHMP4CQ96CF2 MIR521-2-201ENST00000384818 87 ntBASIC-0.65□□□□□ -2.51
CHMP4CQ96CF2 AC022137.1-201ENST00000483735 151 ntBASIC-0.65□□□□□ -2.51
CHMP4CQ96CF2 RNU6-807P-201ENST00000516805 107 ntBASIC-0.65□□□□□ -2.51
CHMP4CQ96CF2 SNORA8.1-201ENST00000384250 140 ntBASIC-0.67□□□□□ -2.52
CHMP4CQ96CF2 AC114755.3-201ENST00000481111 251 ntBASIC-0.67□□□□□ -2.52
CHMP4CQ96CF2 RNA5SP170-201ENST00000517150 101 ntBASIC-0.67□□□□□ -2.52
CHMP4CQ96CF2 MIR6739-201ENST00000622461 75 ntBASIC-0.67□□□□□ -2.52
CHMP4CQ96CF2 MIR1297-201ENST00000637311 77 ntBASIC-0.67□□□□□ -2.52
CHMP4CQ96CF2 MIR204-201ENST00000385200 110 ntBASIC-0.68□□□□□ -2.52
CHMP4CQ96CF2 RNU6-284P-201ENST00000411105 106 ntBASIC-0.68□□□□□ -2.52
CHMP4CQ96CF2 MIR3675-201ENST00000583661 73 ntBASIC-0.68□□□□□ -2.52
CHMP4CQ96CF2 RNU6-30P-201ENST00000384561 107 ntBASIC-0.69□□□□□ -2.52
CHMP4CQ96CF2 MIR4280-201ENST00000582178 76 ntBASIC-0.69□□□□□ -2.52
CHMP4CQ96CF2 RNU6-315P-201ENST00000362666 107 ntBASIC-0.7□□□□□ -2.52
CHMP4CQ96CF2 SNORD115-23-201ENST00000364461 82 ntBASIC-0.7□□□□□ -2.52
CHMP4CQ96CF2 RNU7-171P-201ENST00000459581 62 ntBASIC-0.7□□□□□ -2.52
CHMP4CQ96CF2 MIR6851-201ENST00000617060 67 ntBASIC-0.7□□□□□ -2.52
CHMP4CQ96CF2 AL627230.5-201ENST00000619807 58 ntBASIC-0.7□□□□□ -2.52
CHMP4CQ96CF2 AC090617.8-201ENST00000623339 167 ntBASIC-0.7□□□□□ -2.52
CHMP4CQ96CF2 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.71□□□□□ -2.52
CHMP4CQ96CF2 AC074348.1-201ENST00000426503 132 ntBASIC-0.71□□□□□ -2.52
CHMP4CQ96CF2 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.71□□□□□ -2.52
CHMP4CQ96CF2 MIR5704-201ENST00000584029 77 ntBASIC-0.71□□□□□ -2.52
CHMP4CQ96CF2 RNA5SP470-201ENST00000516463 106 ntBASIC-0.72□□□□□ -2.52
CHMP4CQ96CF2 CYP3A54P-201ENST00000566950 75 ntBASIC-0.72□□□□□ -2.52
CHMP4CQ96CF2 MIR6854-201ENST00000614935 69 ntBASIC-0.72□□□□□ -2.52
CHMP4CQ96CF2 RNU6-330P-201ENST00000363015 107 ntBASIC-0.73□□□□□ -2.53
CHMP4CQ96CF2 SNORA32.3-201ENST00000384772 121 ntBASIC-0.73□□□□□ -2.53
CHMP4CQ96CF2 MIR1255B2-201ENST00000408618 67 ntBASIC-0.73□□□□□ -2.53
CHMP4CQ96CF2 SNORD38.3-201ENST00000516599 73 ntBASIC-0.73□□□□□ -2.53
CHMP4CQ96CF2 MIR4484-201ENST00000582855 83 ntBASIC-0.73□□□□□ -2.53
CHMP4CQ96CF2 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.74□□□□□ -2.53
CHMP4CQ96CF2 RNU6-820P-201ENST00000384273 107 ntBASIC-0.74□□□□□ -2.53
CHMP4CQ96CF2 RNA5SP67-201ENST00000516422 131 ntBASIC-0.74□□□□□ -2.53
CHMP4CQ96CF2 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.75□□□□□ -2.53
CHMP4CQ96CF2 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.75□□□□□ -2.53
CHMP4CQ96CF2 SNORA62.4-201ENST00000365504 151 ntBASIC-0.75□□□□□ -2.53
CHMP4CQ96CF2 SNORA13-201ENST00000458790 133 ntBASIC-0.76□□□□□ -2.53
CHMP4CQ96CF2 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.77□□□□□ -2.53
CHMP4CQ96CF2 SNORD75.1-201ENST00000408373 60 ntBASIC-0.77□□□□□ -2.53
CHMP4CQ96CF2 RNA5SP169-201ENST00000517268 117 ntBASIC-0.77□□□□□ -2.53
CHMP4CQ96CF2 MIR4436A-201ENST00000585278 85 ntBASIC-0.77□□□□□ -2.53
CHMP4CQ96CF2 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.78□□□□□ -2.53
CHMP4CQ96CF2 AL353803.5-201ENST00000599815 141 ntBASIC-0.78□□□□□ -2.53
CHMP4CQ96CF2 MIR1245B-201ENST00000636115 69 ntBASIC-0.79□□□□□ -2.54
CHMP4CQ96CF2 SNORD45.1-201ENST00000363181 77 ntBASIC-0.8□□□□□ -2.54
CHMP4CQ96CF2 MIR518B-201ENST00000385127 83 ntBASIC-0.8□□□□□ -2.54
CHMP4CQ96CF2 RNU6-604P-201ENST00000390917 100 ntBASIC-0.8□□□□□ -2.54
CHMP4CQ96CF2 AC021146.6-201ENST00000514659 117 ntBASIC-0.8□□□□□ -2.54
CHMP4CQ96CF2 RNU6-645P-201ENST00000364649 106 ntBASIC-0.81□□□□□ -2.54
CHMP4CQ96CF2 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.81□□□□□ -2.54
CHMP4CQ96CF2 MT-TQ-201ENST00000387372 72 ntBASIC-0.81□□□□□ -2.54
CHMP4CQ96CF2 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.81□□□□□ -2.54
CHMP4CQ96CF2 RNU6-656P-201ENST00000516785 107 ntBASIC-0.81□□□□□ -2.54
CHMP4CQ96CF2 MIR548AX-201ENST00000580117 73 ntBASIC-0.81□□□□□ -2.54
CHMP4CQ96CF2 RNU4-63P-201ENST00000411313 118 ntBASIC-0.82□□□□□ -2.54
CHMP4CQ96CF2 MIR4712-201ENST00000583750 82 ntBASIC-0.82□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms