Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 SNORD57-201ENST00000448188 72 ntBASIC0.38□□□□□ -2.35
ZNF428Q96B54 RNU6-70P-201ENST00000516438 60 ntBASIC0.38□□□□□ -2.35
ZNF428Q96B54 RNU6-687P-201ENST00000516443 89 ntBASIC0.38□□□□□ -2.35
ZNF428Q96B54 AC084368.1-201ENST00000620935 65 ntBASIC0.38□□□□□ -2.35
ZNF428Q96B54 RNU6-776P-201ENST00000364403 104 ntBASIC0.37□□□□□ -2.35
ZNF428Q96B54 SNORD115-22-201ENST00000364456 82 ntBASIC0.37□□□□□ -2.35
ZNF428Q96B54 RNU6-1022P-201ENST00000365049 104 ntBASIC0.37□□□□□ -2.35
ZNF428Q96B54 RNU6-1241P-201ENST00000384536 107 ntBASIC0.37□□□□□ -2.35
ZNF428Q96B54 Y_RNA.565-201ENST00000384719 101 ntBASIC0.37□□□□□ -2.35
ZNF428Q96B54 SNORD45.1-201ENST00000363181 77 ntBASIC0.36□□□□□ -2.35
ZNF428Q96B54 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
ZNF428Q96B54 AC108676.2-201ENST00000605225 163 ntBASIC0.36□□□□□ -2.35
ZNF428Q96B54 MIR6718-201ENST00000616153 80 ntBASIC0.36□□□□□ -2.35
ZNF428Q96B54 MIR604-201ENST00000384880 94 ntBASIC0.35□□□□□ -2.35
ZNF428Q96B54 SCARNA11.2-201ENST00000517183 154 ntBASIC0.35□□□□□ -2.35
ZNF428Q96B54 MIR4493-201ENST00000584016 73 ntBASIC0.35□□□□□ -2.35
ZNF428Q96B54 SNORD114-31-201ENST00000363219 75 ntBASIC0.34□□□□□ -2.36
ZNF428Q96B54 SNORA42.1-201ENST00000363515 137 ntBASIC0.34□□□□□ -2.36
ZNF428Q96B54 MIR4662A-201ENST00000637499 67 ntBASIC0.34□□□□□ -2.36
ZNF428Q96B54 MIR5190-201ENST00000581537 80 ntBASIC0.33□□□□□ -2.36
ZNF428Q96B54 AP001180.6-201ENST00000584918 159 ntBASIC0.33□□□□□ -2.36
ZNF428Q96B54 RNU6-1036P-201ENST00000383959 104 ntBASIC0.32□□□□□ -2.36
ZNF428Q96B54 AC021146.9-201ENST00000512503 156 ntBASIC0.32□□□□□ -2.36
ZNF428Q96B54 RNU6-752P-201ENST00000516376 102 ntBASIC0.32□□□□□ -2.36
ZNF428Q96B54 RNU6-881P-201ENST00000516813 102 ntBASIC0.32□□□□□ -2.36
ZNF428Q96B54 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.31□□□□□ -2.36
ZNF428Q96B54 MIR20A-201ENST00000362279 71 ntBASIC0.31□□□□□ -2.36
ZNF428Q96B54 SNORA33.1-201ENST00000364957 130 ntBASIC0.31□□□□□ -2.36
ZNF428Q96B54 Y_RNA.545-201ENST00000384652 105 ntBASIC0.31□□□□□ -2.36
ZNF428Q96B54 MIR876-201ENST00000401147 81 ntBASIC0.31□□□□□ -2.36
ZNF428Q96B54 SNX3P1X-201ENST00000414887 175 ntBASIC0.31□□□□□ -2.36
ZNF428Q96B54 Y_RNA.633-201ENST00000459107 95 ntBASIC0.31□□□□□ -2.36
ZNF428Q96B54 SNORA2.1-201ENST00000363089 137 ntBASIC0.3□□□□□ -2.36
ZNF428Q96B54 SNORD114-29-201ENST00000364819 70 ntBASIC0.3□□□□□ -2.36
ZNF428Q96B54 RNU6-587P-201ENST00000391282 106 ntBASIC0.3□□□□□ -2.36
ZNF428Q96B54 RNU6-656P-201ENST00000516785 107 ntBASIC0.3□□□□□ -2.36
ZNF428Q96B54 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.3□□□□□ -2.36
ZNF428Q96B54 SNORA63.6-201ENST00000364921 119 ntBASIC0.29□□□□□ -2.36
ZNF428Q96B54 SNORD116-24-201ENST00000384549 92 ntBASIC0.29□□□□□ -2.36
ZNF428Q96B54 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.29□□□□□ -2.36
ZNF428Q96B54 RNU6-540P-201ENST00000384622 101 ntBASIC0.28□□□□□ -2.36
ZNF428Q96B54 MIR593-201ENST00000384856 100 ntBASIC0.28□□□□□ -2.36
ZNF428Q96B54 MIR154-201ENST00000385243 84 ntBASIC0.28□□□□□ -2.36
ZNF428Q96B54 RNU6-337P-201ENST00000391243 106 ntBASIC0.28□□□□□ -2.36
ZNF428Q96B54 AC244090.1-201ENST00000441884 93 ntBASIC0.28□□□□□ -2.36
ZNF428Q96B54 RNU6-782P-201ENST00000516852 104 ntBASIC0.28□□□□□ -2.36
ZNF428Q96B54 MIR5093-201ENST00000583199 100 ntBASIC0.28□□□□□ -2.36
ZNF428Q96B54 AC104408.1-201ENST00000605241 170 ntBASIC0.28□□□□□ -2.36
ZNF428Q96B54 SNORD113.1-201ENST00000363280 73 ntBASIC0.27□□□□□ -2.37
ZNF428Q96B54 SNORD95.1-201ENST00000364099 68 ntBASIC0.27□□□□□ -2.37
ZNF428Q96B54 RNU6-411P-201ENST00000384451 107 ntBASIC0.27□□□□□ -2.37
ZNF428Q96B54 Y_RNA.610-201ENST00000410681 103 ntBASIC0.27□□□□□ -2.37
ZNF428Q96B54 SNORD114-5-201ENST00000362928 70 ntBASIC0.26□□□□□ -2.37
ZNF428Q96B54 RNU6-645P-201ENST00000364649 106 ntBASIC0.26□□□□□ -2.37
ZNF428Q96B54 MIR610-201ENST00000385139 96 ntBASIC0.26□□□□□ -2.37
ZNF428Q96B54 MIR1295A-201ENST00000408463 79 ntBASIC0.26□□□□□ -2.37
ZNF428Q96B54 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.25□□□□□ -2.37
ZNF428Q96B54 AC104692.1-201ENST00000472406 90 ntBASIC0.24□□□□□ -2.37
ZNF428Q96B54 MIR6739-201ENST00000622461 75 ntBASIC0.24□□□□□ -2.37
ZNF428Q96B54 MIR6514-201ENST00000622549 70 ntBASIC0.24□□□□□ -2.37
ZNF428Q96B54 RNU6-46P-201ENST00000383860 107 ntBASIC0.23□□□□□ -2.37
ZNF428Q96B54 RNA5SP163-201ENST00000410304 99 ntBASIC0.23□□□□□ -2.37
ZNF428Q96B54 RNY1P9-201ENST00000532431 109 ntBASIC0.23□□□□□ -2.37
ZNF428Q96B54 RNA5SP214-201ENST00000363378 118 ntBASIC0.22□□□□□ -2.37
ZNF428Q96B54 SNORA75.1-201ENST00000391130 148 ntBASIC0.22□□□□□ -2.37
ZNF428Q96B54 RNU6-634P-201ENST00000459134 106 ntBASIC0.22□□□□□ -2.37
ZNF428Q96B54 U6.96-201ENST00000636425 70 ntBASIC0.22□□□□□ -2.37
ZNF428Q96B54 MIR371B-201ENST00000638082 66 ntBASIC0.22□□□□□ -2.37
ZNF428Q96B54 RNU6-302P-201ENST00000365249 107 ntBASIC0.21□□□□□ -2.38
ZNF428Q96B54 MIR145-201ENST00000384967 88 ntBASIC0.21□□□□□ -2.38
ZNF428Q96B54 MIR4768-201ENST00000585270 74 ntBASIC0.21□□□□□ -2.38
ZNF428Q96B54 MIR8053-201ENST00000613344 75 ntBASIC0.21□□□□□ -2.38
ZNF428Q96B54 RNU6-502P-201ENST00000362419 108 ntBASIC0.2□□□□□ -2.38
ZNF428Q96B54 SNORD114-9-201ENST00000364370 72 ntBASIC0.2□□□□□ -2.38
ZNF428Q96B54 SNORD49B-201ENST00000365172 72 ntBASIC0.2□□□□□ -2.38
ZNF428Q96B54 RNU6-1162P-201ENST00000384443 104 ntBASIC0.2□□□□□ -2.38
ZNF428Q96B54 AP000676.1-201ENST00000533307 52 ntBASIC0.2□□□□□ -2.38
ZNF428Q96B54 MIR548AG1-201ENST00000579932 66 ntBASIC0.2□□□□□ -2.38
ZNF428Q96B54 MIR6773-201ENST00000612812 74 ntBASIC0.2□□□□□ -2.38
ZNF428Q96B54 U4.2-201ENST00000618561 85 ntBASIC0.2□□□□□ -2.38
ZNF428Q96B54 MIR101-1-201ENST00000362265 75 ntBASIC0.19□□□□□ -2.38
ZNF428Q96B54 RNU6-1296P-201ENST00000383879 107 ntBASIC0.19□□□□□ -2.38
ZNF428Q96B54 RNU6-895P-201ENST00000384125 103 ntBASIC0.19□□□□□ -2.38
ZNF428Q96B54 MIR6507-201ENST00000613630 70 ntBASIC0.19□□□□□ -2.38
ZNF428Q96B54 MIR521-2-201ENST00000384818 87 ntBASIC0.18□□□□□ -2.38
ZNF428Q96B54 SNORA15B-2-201ENST00000384058 135 ntBASIC0.17□□□□□ -2.38
ZNF428Q96B54 SNORA15B-1-201ENST00000384334 135 ntBASIC0.17□□□□□ -2.38
ZNF428Q96B54 MIR548C-201ENST00000384815 97 ntBASIC0.17□□□□□ -2.38
ZNF428Q96B54 RPS29P8-201ENST00000445109 171 ntBASIC0.17□□□□□ -2.38
ZNF428Q96B54 Y_RNA.250-201ENST00000364542 110 ntBASIC0.16□□□□□ -2.38
ZNF428Q96B54 RNU6-929P-201ENST00000384429 107 ntBASIC0.16□□□□□ -2.38
ZNF428Q96B54 RNU6-1246P-201ENST00000391064 107 ntBASIC0.16□□□□□ -2.38
ZNF428Q96B54 RNU6-180P-201ENST00000516697 61 ntBASIC0.16□□□□□ -2.38
ZNF428Q96B54 U2.7-201ENST00000619197 100 ntBASIC0.16□□□□□ -2.38
ZNF428Q96B54 SNORD115-25-201ENST00000362619 82 ntBASIC0.15□□□□□ -2.39
ZNF428Q96B54 RNU6-1184P-201ENST00000384588 108 ntBASIC0.15□□□□□ -2.39
ZNF428Q96B54 CYP3A54P-201ENST00000566950 75 ntBASIC0.15□□□□□ -2.39
ZNF428Q96B54 MIRLET7B-201ENST00000385140 83 ntBASIC0.14□□□□□ -2.39
ZNF428Q96B54 SNORD30.1-201ENST00000391309 70 ntBASIC0.14□□□□□ -2.39
ZNF428Q96B54 AC244250.2-201ENST00000418731 148 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 213.5 ms