Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 MIR1255B2-201ENST00000408618 67 ntBASIC1.11□□□□□ -2.23
HLA-CQ95604 SNORA9.1-201ENST00000362412 131 ntBASIC1.1□□□□□ -2.23
HLA-CQ95604 MIR4677-201ENST00000584153 80 ntBASIC1.1□□□□□ -2.23
HLA-CQ95604 MIR6773-201ENST00000612812 74 ntBASIC1.1□□□□□ -2.23
HLA-CQ95604 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.09□□□□□ -2.23
HLA-CQ95604 RNU6-936P-201ENST00000384005 107 ntBASIC1.09□□□□□ -2.23
HLA-CQ95604 OR2A41P-201ENST00000473586 105 ntBASIC1.09□□□□□ -2.23
HLA-CQ95604 RNU7-188P-201ENST00000517063 64 ntBASIC1.09□□□□□ -2.23
HLA-CQ95604 MIR3973-201ENST00000579824 107 ntBASIC1.09□□□□□ -2.23
HLA-CQ95604 MIR548AD-201ENST00000584780 82 ntBASIC1.09□□□□□ -2.23
HLA-CQ95604 AC090617.8-201ENST00000623339 167 ntBASIC1.09□□□□□ -2.23
HLA-CQ95604 MIR429-201ENST00000362106 83 ntBASIC1.08□□□□□ -2.24
HLA-CQ95604 MIR519A2-201ENST00000384990 87 ntBASIC1.08□□□□□ -2.24
HLA-CQ95604 RNU6-231P-201ENST00000517122 103 ntBASIC1.08□□□□□ -2.24
HLA-CQ95604 MIR532-201ENST00000385025 91 ntBASIC1.07□□□□□ -2.24
HLA-CQ95604 AC098934.3-201ENST00000430450 190 ntBASIC1.07□□□□□ -2.24
HLA-CQ95604 SNORD114-21-201ENST00000606412 72 ntBASIC1.07□□□□□ -2.24
HLA-CQ95604 MIR924-201ENST00000638017 53 ntBASIC1.07□□□□□ -2.24
HLA-CQ95604 Y_RNA.423-201ENST00000384057 113 ntBASIC1.06□□□□□ -2.24
HLA-CQ95604 SNORA49-201ENST00000386157 136 ntBASIC1.06□□□□□ -2.24
HLA-CQ95604 MIR501-201ENST00000390204 84 ntBASIC1.06□□□□□ -2.24
HLA-CQ95604 RNU6-337P-201ENST00000391243 106 ntBASIC1.06□□□□□ -2.24
HLA-CQ95604 Y_RNA.282-201ENST00000364793 102 ntBASIC1.05□□□□□ -2.24
HLA-CQ95604 MIR527-201ENST00000385244 85 ntBASIC1.05□□□□□ -2.24
HLA-CQ95604 RNU6-1246P-201ENST00000391064 107 ntBASIC1.05□□□□□ -2.24
HLA-CQ95604 RNU6-175P-201ENST00000516896 107 ntBASIC1.05□□□□□ -2.24
HLA-CQ95604 AC084368.1-201ENST00000620935 65 ntBASIC1.05□□□□□ -2.24
HLA-CQ95604 SNORD115-25-201ENST00000362619 82 ntBASIC1.04□□□□□ -2.24
HLA-CQ95604 RNU4-38P-201ENST00000364472 129 ntBASIC1.04□□□□□ -2.24
HLA-CQ95604 MIRLET7B-201ENST00000385140 83 ntBASIC1.04□□□□□ -2.24
HLA-CQ95604 MIR6513-201ENST00000621188 64 ntBASIC1.04□□□□□ -2.24
HLA-CQ95604 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.03□□□□□ -2.24
HLA-CQ95604 SNORD114-23-201ENST00000363536 72 ntBASIC1.03□□□□□ -2.24
HLA-CQ95604 MIR4714-201ENST00000580728 77 ntBASIC1.03□□□□□ -2.24
HLA-CQ95604 MIR6755-201ENST00000619993 66 ntBASIC1.03□□□□□ -2.24
HLA-CQ95604 AC010487.4-201ENST00000637027 61 ntBASIC1.03□□□□□ -2.24
HLA-CQ95604 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
HLA-CQ95604 RNU6-246P-201ENST00000384702 107 ntBASIC1.02□□□□□ -2.25
HLA-CQ95604 MIR876-201ENST00000401147 81 ntBASIC1.02□□□□□ -2.25
HLA-CQ95604 MIR1285-1-201ENST00000408593 84 ntBASIC1.02□□□□□ -2.25
HLA-CQ95604 RNA5SP330-201ENST00000517096 96 ntBASIC1.02□□□□□ -2.25
HLA-CQ95604 RNU6-1312P-201ENST00000362425 108 ntBASIC1.01□□□□□ -2.25
HLA-CQ95604 RNA5SP128-201ENST00000365305 116 ntBASIC1.01□□□□□ -2.25
HLA-CQ95604 MIR760-201ENST00000390220 80 ntBASIC1.01□□□□□ -2.25
HLA-CQ95604 RNU6-502P-201ENST00000362419 108 ntBASIC1□□□□□ -2.25
HLA-CQ95604 RNA5SP257-201ENST00000363023 116 ntBASIC0.99□□□□□ -2.25
HLA-CQ95604 MIR106A-201ENST00000384870 81 ntBASIC0.99□□□□□ -2.25
HLA-CQ95604 MIR936-201ENST00000401264 98 ntBASIC0.99□□□□□ -2.25
HLA-CQ95604 MIR7110-201ENST00000612638 86 ntBASIC0.99□□□□□ -2.25
HLA-CQ95604 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.99□□□□□ -2.25
HLA-CQ95604 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
HLA-CQ95604 Y_RNA.379-201ENST00000365653 102 ntBASIC0.98□□□□□ -2.25
HLA-CQ95604 RNA5SP121-201ENST00000516537 101 ntBASIC0.98□□□□□ -2.25
HLA-CQ95604 MIR4698-201ENST00000577795 80 ntBASIC0.98□□□□□ -2.25
HLA-CQ95604 RNU6-1036P-201ENST00000383959 104 ntBASIC0.97□□□□□ -2.25
HLA-CQ95604 PSMC1P5-201ENST00000512850 177 ntBASIC0.97□□□□□ -2.25
HLA-CQ95604 RNU6-1232P-201ENST00000516299 86 ntBASIC0.97□□□□□ -2.25
HLA-CQ95604 RNU4-54P-201ENST00000516428 129 ntBASIC0.97□□□□□ -2.25
HLA-CQ95604 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.97□□□□□ -2.25
HLA-CQ95604 MIR8087-201ENST00000612745 78 ntBASIC0.95□□□□□ -2.26
HLA-CQ95604 RNU6-782P-201ENST00000516852 104 ntBASIC0.94□□□□□ -2.26
HLA-CQ95604 MIR4653-201ENST00000585107 83 ntBASIC0.94□□□□□ -2.26
HLA-CQ95604 RNA5SP62-201ENST00000363457 110 ntBASIC0.93□□□□□ -2.26
HLA-CQ95604 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
HLA-CQ95604 SNORA40B-201ENST00000385573 128 ntBASIC0.92□□□□□ -2.26
HLA-CQ95604 SNORD116.2-201ENST00000391251 93 ntBASIC0.92□□□□□ -2.26
HLA-CQ95604 RN7SL660P-201ENST00000614852 299 ntBASIC0.92□□□□□ -2.26
HLA-CQ95604 SNORA40.16-201ENST00000517238 121 ntBASIC0.91□□□□□ -2.26
HLA-CQ95604 RNA5SP476-201ENST00000516613 103 ntBASIC0.9□□□□□ -2.27
HLA-CQ95604 MIR3925-201ENST00000584674 77 ntBASIC0.9□□□□□ -2.27
HLA-CQ95604 AC103810.9-201ENST00000606688 112 ntBASIC0.9□□□□□ -2.27
HLA-CQ95604 MIR330-201ENST00000362196 94 ntBASIC0.89□□□□□ -2.27
HLA-CQ95604 SNORD115-23-201ENST00000364461 82 ntBASIC0.89□□□□□ -2.27
HLA-CQ95604 MIR6835-201ENST00000621552 64 ntBASIC0.89□□□□□ -2.27
HLA-CQ95604 SNORD44.1-201ENST00000363202 61 ntBASIC0.88□□□□□ -2.27
HLA-CQ95604 RNU6-458P-201ENST00000384179 107 ntBASIC0.88□□□□□ -2.27
HLA-CQ95604 RNU6-980P-201ENST00000516925 103 ntBASIC0.88□□□□□ -2.27
HLA-CQ95604 U6.58-201ENST00000613107 107 ntBASIC0.88□□□□□ -2.27
HLA-CQ95604 SNORD1B-201ENST00000363091 84 ntBASIC0.87□□□□□ -2.27
HLA-CQ95604 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
HLA-CQ95604 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.87□□□□□ -2.27
HLA-CQ95604 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
HLA-CQ95604 RNA5SP98-201ENST00000363158 137 ntBASIC0.86□□□□□ -2.27
HLA-CQ95604 Y_RNA.109-201ENST00000363215 102 ntBASIC0.86□□□□□ -2.27
HLA-CQ95604 RNU6-945P-201ENST00000383947 107 ntBASIC0.85□□□□□ -2.27
HLA-CQ95604 MIR508-201ENST00000384857 115 ntBASIC0.85□□□□□ -2.27
HLA-CQ95604 RNA5SP193-201ENST00000410353 107 ntBASIC0.85□□□□□ -2.27
HLA-CQ95604 RNU6-172P-201ENST00000411000 93 ntBASIC0.85□□□□□ -2.27
HLA-CQ95604 HAR1A.1-201ENST00000459583 118 ntBASIC0.85□□□□□ -2.27
HLA-CQ95604 SCARNA11.2-201ENST00000517183 154 ntBASIC0.85□□□□□ -2.27
HLA-CQ95604 MIR4711-201ENST00000578274 70 ntBASIC0.85□□□□□ -2.27
HLA-CQ95604 AL353803.5-201ENST00000599815 141 ntBASIC0.85□□□□□ -2.27
HLA-CQ95604 uc_338.17-201ENST00000619633 179 ntBASIC0.85□□□□□ -2.27
HLA-CQ95604 MIR1197-201ENST00000408818 88 ntBASIC0.84□□□□□ -2.27
HLA-CQ95604 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.84□□□□□ -2.27
HLA-CQ95604 MIR548X-201ENST00000580069 75 ntBASIC0.84□□□□□ -2.27
HLA-CQ95604 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.83□□□□□ -2.28
HLA-CQ95604 RNU7-129P-201ENST00000516128 62 ntBASIC0.83□□□□□ -2.28
HLA-CQ95604 MIR548AG1-201ENST00000579932 66 ntBASIC0.83□□□□□ -2.28
HLA-CQ95604 MIR499B-201ENST00000636498 73 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 187.3 ms