Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.3□□□□□ -2.2
SNIP1Q8TAD8 MIR598-201ENST00000384868 97 ntBASIC1.29□□□□□ -2.2
SNIP1Q8TAD8 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.29□□□□□ -2.2
SNIP1Q8TAD8 RNU1-124P-201ENST00000363861 145 ntBASIC1.28□□□□□ -2.2
SNIP1Q8TAD8 RNA5SP517-201ENST00000364724 117 ntBASIC1.28□□□□□ -2.2
SNIP1Q8TAD8 MIR520E-201ENST00000384867 87 ntBASIC1.28□□□□□ -2.2
SNIP1Q8TAD8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.28□□□□□ -2.2
SNIP1Q8TAD8 MIR548AL-201ENST00000578416 97 ntBASIC1.28□□□□□ -2.2
SNIP1Q8TAD8 MIR6788-201ENST00000618842 66 ntBASIC1.28□□□□□ -2.2
SNIP1Q8TAD8 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SNIP1Q8TAD8 RNU6-1036P-201ENST00000383959 104 ntBASIC1.27□□□□□ -2.21
SNIP1Q8TAD8 MIR329-2-201ENST00000385029 84 ntBASIC1.27□□□□□ -2.21
SNIP1Q8TAD8 RNU6-724P-201ENST00000390958 105 ntBASIC1.27□□□□□ -2.21
SNIP1Q8TAD8 RPS29P1-201ENST00000465274 159 ntBASIC1.27□□□□□ -2.21
SNIP1Q8TAD8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
SNIP1Q8TAD8 RNU6-1232P-201ENST00000516299 86 ntBASIC1.26□□□□□ -2.21
SNIP1Q8TAD8 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.25□□□□□ -2.21
SNIP1Q8TAD8 AL353803.5-201ENST00000599815 141 ntBASIC1.25□□□□□ -2.21
SNIP1Q8TAD8 SNORA25.18-201ENST00000607153 114 ntBASIC1.25□□□□□ -2.21
SNIP1Q8TAD8 U7.6-201ENST00000610841 64 ntBASIC1.25□□□□□ -2.21
SNIP1Q8TAD8 SNORA2A-201ENST00000383885 135 ntBASIC1.24□□□□□ -2.21
SNIP1Q8TAD8 RNU6-229P-201ENST00000516614 102 ntBASIC1.24□□□□□ -2.21
SNIP1Q8TAD8 SNORA36.2-201ENST00000384004 127 ntBASIC1.23□□□□□ -2.21
SNIP1Q8TAD8 MIR320A-201ENST00000385302 82 ntBASIC1.23□□□□□ -2.21
SNIP1Q8TAD8 RNU6-1262P-201ENST00000516217 96 ntBASIC1.23□□□□□ -2.21
SNIP1Q8TAD8 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.23□□□□□ -2.21
SNIP1Q8TAD8 Y_RNA.423-201ENST00000384057 113 ntBASIC1.22□□□□□ -2.21
SNIP1Q8TAD8 MIR548AA1-201ENST00000384971 97 ntBASIC1.22□□□□□ -2.21
SNIP1Q8TAD8 RNU6-995P-201ENST00000391244 107 ntBASIC1.22□□□□□ -2.21
SNIP1Q8TAD8 MIR548J-201ENST00000408833 112 ntBASIC1.22□□□□□ -2.21
SNIP1Q8TAD8 AL451105.1-201ENST00000450005 189 ntBASIC1.22□□□□□ -2.21
SNIP1Q8TAD8 AL353765.1-201ENST00000605514 183 ntBASIC1.22□□□□□ -2.21
SNIP1Q8TAD8 SNORD114-27-201ENST00000363766 70 ntBASIC1.21□□□□□ -2.22
SNIP1Q8TAD8 RNU6-828P-201ENST00000364876 107 ntBASIC1.21□□□□□ -2.22
SNIP1Q8TAD8 RNU6-939P-201ENST00000384634 107 ntBASIC1.21□□□□□ -2.22
SNIP1Q8TAD8 ACA64.5-201ENST00000516207 127 ntBASIC1.21□□□□□ -2.22
SNIP1Q8TAD8 MIR6767-201ENST00000637302 66 ntBASIC1.21□□□□□ -2.22
SNIP1Q8TAD8 MIR125B1-201ENST00000385236 88 ntBASIC1.2□□□□□ -2.22
SNIP1Q8TAD8 MIR4677-201ENST00000584153 80 ntBASIC1.2□□□□□ -2.22
SNIP1Q8TAD8 AC084368.1-201ENST00000620935 65 ntBASIC1.2□□□□□ -2.22
SNIP1Q8TAD8 SNORD118-201ENST00000363593 134 ntBASIC1.19□□□□□ -2.22
SNIP1Q8TAD8 MIR150-201ENST00000385048 84 ntBASIC1.19□□□□□ -2.22
SNIP1Q8TAD8 RNU6-696P-201ENST00000390834 107 ntBASIC1.18□□□□□ -2.22
SNIP1Q8TAD8 RNU6-1267P-201ENST00000410747 107 ntBASIC1.18□□□□□ -2.22
SNIP1Q8TAD8 MIR4432-201ENST00000581823 84 ntBASIC1.18□□□□□ -2.22
SNIP1Q8TAD8 AC108676.2-201ENST00000605225 163 ntBASIC1.18□□□□□ -2.22
SNIP1Q8TAD8 RN7SL660P-201ENST00000614852 299 ntBASIC1.18□□□□□ -2.22
SNIP1Q8TAD8 MIR140-201ENST00000385282 100 ntBASIC1.17□□□□□ -2.22
SNIP1Q8TAD8 MIR501-201ENST00000390204 84 ntBASIC1.17□□□□□ -2.22
SNIP1Q8TAD8 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SNIP1Q8TAD8 SNORD115-23-201ENST00000364461 82 ntBASIC1.16□□□□□ -2.22
SNIP1Q8TAD8 RNU6-945P-201ENST00000383947 107 ntBASIC1.16□□□□□ -2.22
SNIP1Q8TAD8 AC087343.1-201ENST00000477341 475 ntBASIC1.16□□□□□ -2.22
SNIP1Q8TAD8 Y_RNA.139-201ENST00000363464 102 ntBASIC1.15□□□□□ -2.23
SNIP1Q8TAD8 RNU6-1204P-201ENST00000363948 107 ntBASIC1.15□□□□□ -2.23
SNIP1Q8TAD8 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.15□□□□□ -2.23
SNIP1Q8TAD8 Y_RNA.698-201ENST00000516798 118 ntBASIC1.15□□□□□ -2.23
SNIP1Q8TAD8 MIR4295-201ENST00000585286 85 ntBASIC1.15□□□□□ -2.23
SNIP1Q8TAD8 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.14□□□□□ -2.23
SNIP1Q8TAD8 SNORA40.8-201ENST00000411034 126 ntBASIC1.14□□□□□ -2.23
SNIP1Q8TAD8 U7.5-201ENST00000517224 61 ntBASIC1.14□□□□□ -2.23
SNIP1Q8TAD8 MIR6755-201ENST00000619993 66 ntBASIC1.14□□□□□ -2.23
SNIP1Q8TAD8 RNU6-974P-201ENST00000384099 108 ntBASIC1.13□□□□□ -2.23
SNIP1Q8TAD8 RNU7-88P-201ENST00000458752 63 ntBASIC1.13□□□□□ -2.23
SNIP1Q8TAD8 RNU4-54P-201ENST00000516428 129 ntBASIC1.13□□□□□ -2.23
SNIP1Q8TAD8 AP000676.1-201ENST00000533307 52 ntBASIC1.13□□□□□ -2.23
SNIP1Q8TAD8 Y_RNA.374-201ENST00000365606 101 ntBASIC1.11□□□□□ -2.23
SNIP1Q8TAD8 SNORD57-201ENST00000448188 72 ntBASIC1.11□□□□□ -2.23
SNIP1Q8TAD8 RNA5SP61-201ENST00000516453 100 ntBASIC1.1□□□□□ -2.23
SNIP1Q8TAD8 RN7SL793P-201ENST00000583259 296 ntBASIC1.1□□□□□ -2.23
SNIP1Q8TAD8 MIR3925-201ENST00000584674 77 ntBASIC1.1□□□□□ -2.23
SNIP1Q8TAD8 snoR1.1-201ENST00000628177 80 ntBASIC1.1□□□□□ -2.23
SNIP1Q8TAD8 RNU6-822P-201ENST00000362707 106 ntBASIC1.09□□□□□ -2.23
SNIP1Q8TAD8 SNORD45.2-201ENST00000363552 72 ntBASIC1.09□□□□□ -2.23
SNIP1Q8TAD8 MIR760-201ENST00000390220 80 ntBASIC1.09□□□□□ -2.23
SNIP1Q8TAD8 SNORD71-201ENST00000411292 86 ntBASIC1.09□□□□□ -2.23
SNIP1Q8TAD8 MIR5000-201ENST00000577717 103 ntBASIC1.09□□□□□ -2.23
SNIP1Q8TAD8 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
SNIP1Q8TAD8 MIR518A1-201ENST00000385068 85 ntBASIC1.08□□□□□ -2.24
SNIP1Q8TAD8 RNU6-721P-201ENST00000410155 105 ntBASIC1.08□□□□□ -2.24
SNIP1Q8TAD8 RNU6-1174P-201ENST00000517278 101 ntBASIC1.08□□□□□ -2.24
SNIP1Q8TAD8 U6.103-201ENST00000637085 61 ntBASIC1.08□□□□□ -2.24
SNIP1Q8TAD8 RNU6-848P-201ENST00000515948 107 ntBASIC1.07□□□□□ -2.24
SNIP1Q8TAD8 RNA5SP436-201ENST00000516020 115 ntBASIC1.07□□□□□ -2.24
SNIP1Q8TAD8 RNU6-617P-201ENST00000516147 107 ntBASIC1.07□□□□□ -2.24
SNIP1Q8TAD8 RNU6-473P-201ENST00000516164 107 ntBASIC1.07□□□□□ -2.24
SNIP1Q8TAD8 RNU6-1049P-201ENST00000516414 107 ntBASIC1.07□□□□□ -2.24
SNIP1Q8TAD8 AC211469.2-201ENST00000605461 205 ntBASIC1.07□□□□□ -2.24
SNIP1Q8TAD8 MIR6888-201ENST00000621977 67 ntBASIC1.07□□□□□ -2.24
SNIP1Q8TAD8 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
SNIP1Q8TAD8 RNU6-742P-201ENST00000365289 107 ntBASIC1.06□□□□□ -2.24
SNIP1Q8TAD8 MIR29B1-201ENST00000385015 81 ntBASIC1.06□□□□□ -2.24
SNIP1Q8TAD8 MIR876-201ENST00000401147 81 ntBASIC1.06□□□□□ -2.24
SNIP1Q8TAD8 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
SNIP1Q8TAD8 SNORD63.1-201ENST00000516178 80 ntBASIC1.06□□□□□ -2.24
SNIP1Q8TAD8 AC068338.1-201ENST00000565567 176 ntBASIC1.06□□□□□ -2.24
SNIP1Q8TAD8 MIR4464-201ENST00000580818 92 ntBASIC1.06□□□□□ -2.24
SNIP1Q8TAD8 MIR499B-201ENST00000636498 73 ntBASIC1.06□□□□□ -2.24
SNIP1Q8TAD8 RNU6-1008P-201ENST00000384160 104 ntBASIC1.05□□□□□ -2.24
SNIP1Q8TAD8 MIR4661-201ENST00000582720 75 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms