Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.3□□□□□ -2.2
SNIP1Q8TAD8 MIR598-201ENST00000384868 97 ntBASIC1.29□□□□□ -2.2
SNIP1Q8TAD8 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.29□□□□□ -2.2
SNIP1Q8TAD8 RNU1-124P-201ENST00000363861 145 ntBASIC1.28□□□□□ -2.2
SNIP1Q8TAD8 RNA5SP517-201ENST00000364724 117 ntBASIC1.28□□□□□ -2.2
SNIP1Q8TAD8 MIR520E-201ENST00000384867 87 ntBASIC1.28□□□□□ -2.2
SNIP1Q8TAD8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.28□□□□□ -2.2
SNIP1Q8TAD8 MIR548AL-201ENST00000578416 97 ntBASIC1.28□□□□□ -2.2
SNIP1Q8TAD8 MIR6788-201ENST00000618842 66 ntBASIC1.28□□□□□ -2.2
SNIP1Q8TAD8 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SNIP1Q8TAD8 RNU6-1036P-201ENST00000383959 104 ntBASIC1.27□□□□□ -2.21
SNIP1Q8TAD8 MIR329-2-201ENST00000385029 84 ntBASIC1.27□□□□□ -2.21
SNIP1Q8TAD8 RNU6-724P-201ENST00000390958 105 ntBASIC1.27□□□□□ -2.21
SNIP1Q8TAD8 RPS29P1-201ENST00000465274 159 ntBASIC1.27□□□□□ -2.21
SNIP1Q8TAD8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
SNIP1Q8TAD8 RNU6-1232P-201ENST00000516299 86 ntBASIC1.26□□□□□ -2.21
SNIP1Q8TAD8 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.25□□□□□ -2.21
SNIP1Q8TAD8 AL353803.5-201ENST00000599815 141 ntBASIC1.25□□□□□ -2.21
SNIP1Q8TAD8 SNORA25.18-201ENST00000607153 114 ntBASIC1.25□□□□□ -2.21
SNIP1Q8TAD8 U7.6-201ENST00000610841 64 ntBASIC1.25□□□□□ -2.21
SNIP1Q8TAD8 SNORA2A-201ENST00000383885 135 ntBASIC1.24□□□□□ -2.21
SNIP1Q8TAD8 RNU6-229P-201ENST00000516614 102 ntBASIC1.24□□□□□ -2.21
SNIP1Q8TAD8 SNORA36.2-201ENST00000384004 127 ntBASIC1.23□□□□□ -2.21
SNIP1Q8TAD8 MIR320A-201ENST00000385302 82 ntBASIC1.23□□□□□ -2.21
SNIP1Q8TAD8 RNU6-1262P-201ENST00000516217 96 ntBASIC1.23□□□□□ -2.21
SNIP1Q8TAD8 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.23□□□□□ -2.21
SNIP1Q8TAD8 Y_RNA.423-201ENST00000384057 113 ntBASIC1.22□□□□□ -2.21
SNIP1Q8TAD8 MIR548AA1-201ENST00000384971 97 ntBASIC1.22□□□□□ -2.21
SNIP1Q8TAD8 RNU6-995P-201ENST00000391244 107 ntBASIC1.22□□□□□ -2.21
SNIP1Q8TAD8 MIR548J-201ENST00000408833 112 ntBASIC1.22□□□□□ -2.21
SNIP1Q8TAD8 AL451105.1-201ENST00000450005 189 ntBASIC1.22□□□□□ -2.21
SNIP1Q8TAD8 AL353765.1-201ENST00000605514 183 ntBASIC1.22□□□□□ -2.21
SNIP1Q8TAD8 SNORD114-27-201ENST00000363766 70 ntBASIC1.21□□□□□ -2.22
SNIP1Q8TAD8 RNU6-828P-201ENST00000364876 107 ntBASIC1.21□□□□□ -2.22
SNIP1Q8TAD8 RNU6-939P-201ENST00000384634 107 ntBASIC1.21□□□□□ -2.22
SNIP1Q8TAD8 ACA64.5-201ENST00000516207 127 ntBASIC1.21□□□□□ -2.22
SNIP1Q8TAD8 MIR6767-201ENST00000637302 66 ntBASIC1.21□□□□□ -2.22
SNIP1Q8TAD8 MIR125B1-201ENST00000385236 88 ntBASIC1.2□□□□□ -2.22
SNIP1Q8TAD8 MIR4677-201ENST00000584153 80 ntBASIC1.2□□□□□ -2.22
SNIP1Q8TAD8 AC084368.1-201ENST00000620935 65 ntBASIC1.2□□□□□ -2.22
SNIP1Q8TAD8 SNORD118-201ENST00000363593 134 ntBASIC1.19□□□□□ -2.22
SNIP1Q8TAD8 MIR150-201ENST00000385048 84 ntBASIC1.19□□□□□ -2.22
SNIP1Q8TAD8 RNU6-696P-201ENST00000390834 107 ntBASIC1.18□□□□□ -2.22
SNIP1Q8TAD8 RNU6-1267P-201ENST00000410747 107 ntBASIC1.18□□□□□ -2.22
SNIP1Q8TAD8 MIR4432-201ENST00000581823 84 ntBASIC1.18□□□□□ -2.22
SNIP1Q8TAD8 AC108676.2-201ENST00000605225 163 ntBASIC1.18□□□□□ -2.22
SNIP1Q8TAD8 RN7SL660P-201ENST00000614852 299 ntBASIC1.18□□□□□ -2.22
SNIP1Q8TAD8 MIR140-201ENST00000385282 100 ntBASIC1.17□□□□□ -2.22
SNIP1Q8TAD8 MIR501-201ENST00000390204 84 ntBASIC1.17□□□□□ -2.22
SNIP1Q8TAD8 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SNIP1Q8TAD8 SNORD115-23-201ENST00000364461 82 ntBASIC1.16□□□□□ -2.22
SNIP1Q8TAD8 RNU6-945P-201ENST00000383947 107 ntBASIC1.16□□□□□ -2.22
SNIP1Q8TAD8 AC087343.1-201ENST00000477341 475 ntBASIC1.16□□□□□ -2.22
SNIP1Q8TAD8 Y_RNA.139-201ENST00000363464 102 ntBASIC1.15□□□□□ -2.23
SNIP1Q8TAD8 RNU6-1204P-201ENST00000363948 107 ntBASIC1.15□□□□□ -2.23
SNIP1Q8TAD8 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.15□□□□□ -2.23
SNIP1Q8TAD8 Y_RNA.698-201ENST00000516798 118 ntBASIC1.15□□□□□ -2.23
SNIP1Q8TAD8 MIR4295-201ENST00000585286 85 ntBASIC1.15□□□□□ -2.23
SNIP1Q8TAD8 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.14□□□□□ -2.23
SNIP1Q8TAD8 SNORA40.8-201ENST00000411034 126 ntBASIC1.14□□□□□ -2.23
SNIP1Q8TAD8 U7.5-201ENST00000517224 61 ntBASIC1.14□□□□□ -2.23
SNIP1Q8TAD8 MIR6755-201ENST00000619993 66 ntBASIC1.14□□□□□ -2.23
SNIP1Q8TAD8 RNU6-974P-201ENST00000384099 108 ntBASIC1.13□□□□□ -2.23
SNIP1Q8TAD8 RNU7-88P-201ENST00000458752 63 ntBASIC1.13□□□□□ -2.23
SNIP1Q8TAD8 RNU4-54P-201ENST00000516428 129 ntBASIC1.13□□□□□ -2.23
SNIP1Q8TAD8 AP000676.1-201ENST00000533307 52 ntBASIC1.13□□□□□ -2.23
SNIP1Q8TAD8 Y_RNA.374-201ENST00000365606 101 ntBASIC1.11□□□□□ -2.23
SNIP1Q8TAD8 SNORD57-201ENST00000448188 72 ntBASIC1.11□□□□□ -2.23
SNIP1Q8TAD8 RNA5SP61-201ENST00000516453 100 ntBASIC1.1□□□□□ -2.23
SNIP1Q8TAD8 RN7SL793P-201ENST00000583259 296 ntBASIC1.1□□□□□ -2.23
SNIP1Q8TAD8 MIR3925-201ENST00000584674 77 ntBASIC1.1□□□□□ -2.23
SNIP1Q8TAD8 snoR1.1-201ENST00000628177 80 ntBASIC1.1□□□□□ -2.23
SNIP1Q8TAD8 RNU6-822P-201ENST00000362707 106 ntBASIC1.09□□□□□ -2.23
SNIP1Q8TAD8 SNORD45.2-201ENST00000363552 72 ntBASIC1.09□□□□□ -2.23
SNIP1Q8TAD8 MIR760-201ENST00000390220 80 ntBASIC1.09□□□□□ -2.23
SNIP1Q8TAD8 SNORD71-201ENST00000411292 86 ntBASIC1.09□□□□□ -2.23
SNIP1Q8TAD8 MIR5000-201ENST00000577717 103 ntBASIC1.09□□□□□ -2.23
SNIP1Q8TAD8 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
SNIP1Q8TAD8 MIR518A1-201ENST00000385068 85 ntBASIC1.08□□□□□ -2.24
SNIP1Q8TAD8 RNU6-721P-201ENST00000410155 105 ntBASIC1.08□□□□□ -2.24
SNIP1Q8TAD8 RNU6-1174P-201ENST00000517278 101 ntBASIC1.08□□□□□ -2.24
SNIP1Q8TAD8 U6.103-201ENST00000637085 61 ntBASIC1.08□□□□□ -2.24
SNIP1Q8TAD8 RNU6-848P-201ENST00000515948 107 ntBASIC1.07□□□□□ -2.24
SNIP1Q8TAD8 RNA5SP436-201ENST00000516020 115 ntBASIC1.07□□□□□ -2.24
SNIP1Q8TAD8 RNU6-617P-201ENST00000516147 107 ntBASIC1.07□□□□□ -2.24
SNIP1Q8TAD8 RNU6-473P-201ENST00000516164 107 ntBASIC1.07□□□□□ -2.24
SNIP1Q8TAD8 RNU6-1049P-201ENST00000516414 107 ntBASIC1.07□□□□□ -2.24
SNIP1Q8TAD8 AC211469.2-201ENST00000605461 205 ntBASIC1.07□□□□□ -2.24
SNIP1Q8TAD8 MIR6888-201ENST00000621977 67 ntBASIC1.07□□□□□ -2.24
SNIP1Q8TAD8 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
SNIP1Q8TAD8 RNU6-742P-201ENST00000365289 107 ntBASIC1.06□□□□□ -2.24
SNIP1Q8TAD8 MIR29B1-201ENST00000385015 81 ntBASIC1.06□□□□□ -2.24
SNIP1Q8TAD8 MIR876-201ENST00000401147 81 ntBASIC1.06□□□□□ -2.24
SNIP1Q8TAD8 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
SNIP1Q8TAD8 SNORD63.1-201ENST00000516178 80 ntBASIC1.06□□□□□ -2.24
SNIP1Q8TAD8 AC068338.1-201ENST00000565567 176 ntBASIC1.06□□□□□ -2.24
SNIP1Q8TAD8 MIR4464-201ENST00000580818 92 ntBASIC1.06□□□□□ -2.24
SNIP1Q8TAD8 MIR499B-201ENST00000636498 73 ntBASIC1.06□□□□□ -2.24
SNIP1Q8TAD8 RNU6-1008P-201ENST00000384160 104 ntBASIC1.05□□□□□ -2.24
SNIP1Q8TAD8 MIR4661-201ENST00000582720 75 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 240.2 ms