Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 RNU4-38P-201ENST00000364472 129 ntBASIC1.19□□□□□ -2.22
NEDD1Q8NHV4 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.19□□□□□ -2.22
NEDD1Q8NHV4 MIR429-201ENST00000362106 83 ntBASIC1.18□□□□□ -2.22
NEDD1Q8NHV4 SNORD114-29-201ENST00000364819 70 ntBASIC1.18□□□□□ -2.22
NEDD1Q8NHV4 SNORD2-201ENST00000459163 69 ntBASIC1.18□□□□□ -2.22
NEDD1Q8NHV4 RNU6-1262P-201ENST00000516217 96 ntBASIC1.18□□□□□ -2.22
NEDD1Q8NHV4 Y_RNA.698-201ENST00000516798 118 ntBASIC1.18□□□□□ -2.22
NEDD1Q8NHV4 RNU6-1223P-201ENST00000517124 104 ntBASIC1.18□□□□□ -2.22
NEDD1Q8NHV4 RNU1-124P-201ENST00000363861 145 ntBASIC1.17□□□□□ -2.22
NEDD1Q8NHV4 RNA5SP517-201ENST00000364724 117 ntBASIC1.17□□□□□ -2.22
NEDD1Q8NHV4 SNORD114-24-201ENST00000365029 72 ntBASIC1.17□□□□□ -2.22
NEDD1Q8NHV4 RNU4-45P-201ENST00000365469 141 ntBASIC1.17□□□□□ -2.22
NEDD1Q8NHV4 RNA5SP404-201ENST00000517118 132 ntBASIC1.17□□□□□ -2.22
NEDD1Q8NHV4 AC022709.1-201ENST00000615967 87 ntBASIC1.17□□□□□ -2.22
NEDD1Q8NHV4 RNU6-974P-201ENST00000384099 108 ntBASIC1.16□□□□□ -2.22
NEDD1Q8NHV4 MIR598-201ENST00000384868 97 ntBASIC1.16□□□□□ -2.22
NEDD1Q8NHV4 AL451105.1-201ENST00000450005 189 ntBASIC1.16□□□□□ -2.22
NEDD1Q8NHV4 AL353803.5-201ENST00000599815 141 ntBASIC1.16□□□□□ -2.22
NEDD1Q8NHV4 Y_RNA.540-201ENST00000384638 111 ntBASIC1.15□□□□□ -2.23
NEDD1Q8NHV4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.15□□□□□ -2.23
NEDD1Q8NHV4 RPS29P1-201ENST00000465274 159 ntBASIC1.15□□□□□ -2.23
NEDD1Q8NHV4 MIR151B-201ENST00000584249 96 ntBASIC1.15□□□□□ -2.23
NEDD1Q8NHV4 MIR373-201ENST00000362273 69 ntBASIC1.14□□□□□ -2.23
NEDD1Q8NHV4 SNORD115-23-201ENST00000364461 82 ntBASIC1.14□□□□□ -2.23
NEDD1Q8NHV4 RNU6-1036P-201ENST00000383959 104 ntBASIC1.14□□□□□ -2.23
NEDD1Q8NHV4 MIR520E-201ENST00000384867 87 ntBASIC1.14□□□□□ -2.23
NEDD1Q8NHV4 MIR329-2-201ENST00000385029 84 ntBASIC1.14□□□□□ -2.23
NEDD1Q8NHV4 RNU6-1267P-201ENST00000410747 107 ntBASIC1.14□□□□□ -2.23
NEDD1Q8NHV4 RNA5SP222-201ENST00000411039 105 ntBASIC1.14□□□□□ -2.23
NEDD1Q8NHV4 SNORA25.18-201ENST00000607153 114 ntBASIC1.14□□□□□ -2.23
NEDD1Q8NHV4 MIR6779-201ENST00000617283 64 ntBASIC1.14□□□□□ -2.23
NEDD1Q8NHV4 MIR532-201ENST00000385025 91 ntBASIC1.13□□□□□ -2.23
NEDD1Q8NHV4 ACA64.5-201ENST00000516207 127 ntBASIC1.13□□□□□ -2.23
NEDD1Q8NHV4 MIR6788-201ENST00000618842 66 ntBASIC1.13□□□□□ -2.23
NEDD1Q8NHV4 Y_RNA.139-201ENST00000363464 102 ntBASIC1.12□□□□□ -2.23
NEDD1Q8NHV4 RNA5SP325-201ENST00000363756 130 ntBASIC1.12□□□□□ -2.23
NEDD1Q8NHV4 RNU6-828P-201ENST00000364876 107 ntBASIC1.12□□□□□ -2.23
NEDD1Q8NHV4 MIR4677-201ENST00000584153 80 ntBASIC1.12□□□□□ -2.23
NEDD1Q8NHV4 RN7SL660P-201ENST00000614852 299 ntBASIC1.12□□□□□ -2.23
NEDD1Q8NHV4 MIR548AA1-201ENST00000384971 97 ntBASIC1.11□□□□□ -2.23
NEDD1Q8NHV4 MIR501-201ENST00000390204 84 ntBASIC1.11□□□□□ -2.23
NEDD1Q8NHV4 MIR4661-201ENST00000582720 75 ntBASIC1.11□□□□□ -2.23
NEDD1Q8NHV4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.11□□□□□ -2.23
NEDD1Q8NHV4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
NEDD1Q8NHV4 MIR29B1-201ENST00000385015 81 ntBASIC1.1□□□□□ -2.23
NEDD1Q8NHV4 AL353765.1-201ENST00000605514 183 ntBASIC1.1□□□□□ -2.23
NEDD1Q8NHV4 MTRNR2L9-201ENST00000622562 75 ntBASIC1.1□□□□□ -2.23
NEDD1Q8NHV4 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
NEDD1Q8NHV4 SNORD118-201ENST00000363593 134 ntBASIC1.09□□□□□ -2.23
NEDD1Q8NHV4 RNU6-696P-201ENST00000390834 107 ntBASIC1.09□□□□□ -2.23
NEDD1Q8NHV4 MIR548H4-201ENST00000408689 111 ntBASIC1.09□□□□□ -2.23
NEDD1Q8NHV4 MIR548J-201ENST00000408833 112 ntBASIC1.09□□□□□ -2.23
NEDD1Q8NHV4 MIR3973-201ENST00000579824 107 ntBASIC1.09□□□□□ -2.23
NEDD1Q8NHV4 MIR6857-201ENST00000613267 93 ntBASIC1.09□□□□□ -2.23
NEDD1Q8NHV4 MIR6755-201ENST00000619993 66 ntBASIC1.09□□□□□ -2.23
NEDD1Q8NHV4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
NEDD1Q8NHV4 SNORA2A-201ENST00000383885 135 ntBASIC1.08□□□□□ -2.24
NEDD1Q8NHV4 RNU6-1008P-201ENST00000384160 104 ntBASIC1.08□□□□□ -2.24
NEDD1Q8NHV4 SNORD57-201ENST00000448188 72 ntBASIC1.08□□□□□ -2.24
NEDD1Q8NHV4 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
NEDD1Q8NHV4 RNU6-229P-201ENST00000516614 102 ntBASIC1.08□□□□□ -2.24
NEDD1Q8NHV4 MIR4464-201ENST00000580818 92 ntBASIC1.08□□□□□ -2.24
NEDD1Q8NHV4 MIR4432-201ENST00000581823 84 ntBASIC1.08□□□□□ -2.24
NEDD1Q8NHV4 AC108676.2-201ENST00000605225 163 ntBASIC1.08□□□□□ -2.24
NEDD1Q8NHV4 PVT1_3.1-201ENST00000620853 95 ntBASIC1.08□□□□□ -2.24
NEDD1Q8NHV4 RNU6-1204P-201ENST00000363948 107 ntBASIC1.07□□□□□ -2.24
NEDD1Q8NHV4 RNU6-945P-201ENST00000383947 107 ntBASIC1.07□□□□□ -2.24
NEDD1Q8NHV4 U7.5-201ENST00000517224 61 ntBASIC1.07□□□□□ -2.24
NEDD1Q8NHV4 AC103810.9-201ENST00000606688 112 ntBASIC1.07□□□□□ -2.24
NEDD1Q8NHV4 U6.103-201ENST00000637085 61 ntBASIC1.07□□□□□ -2.24
NEDD1Q8NHV4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.06□□□□□ -2.24
NEDD1Q8NHV4 RNU6-822P-201ENST00000362707 106 ntBASIC1.06□□□□□ -2.24
NEDD1Q8NHV4 Y_RNA.423-201ENST00000384057 113 ntBASIC1.06□□□□□ -2.24
NEDD1Q8NHV4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.06□□□□□ -2.24
NEDD1Q8NHV4 RNU4-54P-201ENST00000516428 129 ntBASIC1.06□□□□□ -2.24
NEDD1Q8NHV4 MIR3925-201ENST00000584674 77 ntBASIC1.06□□□□□ -2.24
NEDD1Q8NHV4 MIR6888-201ENST00000621977 67 ntBASIC1.06□□□□□ -2.24
NEDD1Q8NHV4 RNU6-995P-201ENST00000391244 107 ntBASIC1.05□□□□□ -2.24
NEDD1Q8NHV4 AC098934.3-201ENST00000430450 190 ntBASIC1.05□□□□□ -2.24
NEDD1Q8NHV4 AC211469.2-201ENST00000605461 205 ntBASIC1.05□□□□□ -2.24
NEDD1Q8NHV4 SNORA36.2-201ENST00000384004 127 ntBASIC1.04□□□□□ -2.24
NEDD1Q8NHV4 RNU6-721P-201ENST00000410155 105 ntBASIC1.04□□□□□ -2.24
NEDD1Q8NHV4 RNU7-88P-201ENST00000458752 63 ntBASIC1.04□□□□□ -2.24
NEDD1Q8NHV4 RNU6-742P-201ENST00000365289 107 ntBASIC1.03□□□□□ -2.24
NEDD1Q8NHV4 RNU6-59P-201ENST00000384787 107 ntBASIC1.03□□□□□ -2.24
NEDD1Q8NHV4 MIR140-201ENST00000385282 100 ntBASIC1.03□□□□□ -2.24
NEDD1Q8NHV4 RNU6-1174P-201ENST00000517278 101 ntBASIC1.03□□□□□ -2.24
NEDD1Q8NHV4 U7.6-201ENST00000610841 64 ntBASIC1.03□□□□□ -2.24
NEDD1Q8NHV4 AC084368.1-201ENST00000620935 65 ntBASIC1.03□□□□□ -2.24
NEDD1Q8NHV4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
NEDD1Q8NHV4 MIR4698-201ENST00000577795 80 ntBASIC1.02□□□□□ -2.25
NEDD1Q8NHV4 MIR876-201ENST00000401147 81 ntBASIC1.01□□□□□ -2.25
NEDD1Q8NHV4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
NEDD1Q8NHV4 SNORA40.8-201ENST00000411034 126 ntBASIC1□□□□□ -2.25
NEDD1Q8NHV4 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1□□□□□ -2.25
NEDD1Q8NHV4 AP000676.1-201ENST00000533307 52 ntBASIC1□□□□□ -2.25
NEDD1Q8NHV4 AL445584.3-201ENST00000617173 78 ntBASIC1□□□□□ -2.25
NEDD1Q8NHV4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.99□□□□□ -2.25
NEDD1Q8NHV4 MIR5000-201ENST00000577717 103 ntBASIC0.99□□□□□ -2.25
NEDD1Q8NHV4 MIR216A-201ENST00000385063 110 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 212.6 ms