Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 SNORD105-201ENST00000386910 85 ntBASIC1.66□□□□□ -2.14
TRAF7Q6Q0C0 RNU6-1111P-201ENST00000391118 107 ntBASIC1.66□□□□□ -2.14
TRAF7Q6Q0C0 MIR6888-201ENST00000621977 67 ntBASIC1.66□□□□□ -2.14
TRAF7Q6Q0C0 SNORA31.24-201ENST00000517232 57 ntBASIC1.65□□□□□ -2.15
TRAF7Q6Q0C0 MIR4464-201ENST00000580818 92 ntBASIC1.65□□□□□ -2.15
TRAF7Q6Q0C0 SNORA27.2-201ENST00000363365 126 ntBASIC1.64□□□□□ -2.15
TRAF7Q6Q0C0 MIR19B1-201ENST00000384829 87 ntBASIC1.64□□□□□ -2.15
TRAF7Q6Q0C0 MIR4752-201ENST00000579672 72 ntBASIC1.64□□□□□ -2.15
TRAF7Q6Q0C0 MIR3612-201ENST00000579753 87 ntBASIC1.64□□□□□ -2.15
TRAF7Q6Q0C0 Y_RNA.118-201ENST00000363300 101 ntBASIC1.63□□□□□ -2.15
TRAF7Q6Q0C0 RNU1-124P-201ENST00000363861 145 ntBASIC1.63□□□□□ -2.15
TRAF7Q6Q0C0 SNORD114-29-201ENST00000364819 70 ntBASIC1.63□□□□□ -2.15
TRAF7Q6Q0C0 RNU6-1238P-201ENST00000517215 102 ntBASIC1.63□□□□□ -2.15
TRAF7Q6Q0C0 AC104408.1-201ENST00000605241 170 ntBASIC1.63□□□□□ -2.15
TRAF7Q6Q0C0 MIR202-201ENST00000362219 110 ntBASIC1.62□□□□□ -2.15
TRAF7Q6Q0C0 RNU6-997P-201ENST00000384725 107 ntBASIC1.62□□□□□ -2.15
TRAF7Q6Q0C0 MIR520D-201ENST00000385002 87 ntBASIC1.62□□□□□ -2.15
TRAF7Q6Q0C0 MIR6504-201ENST00000613520 61 ntBASIC1.62□□□□□ -2.15
TRAF7Q6Q0C0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
TRAF7Q6Q0C0 MIR489-201ENST00000384923 84 ntBASIC1.61□□□□□ -2.15
TRAF7Q6Q0C0 RNA5SP268-201ENST00000516828 124 ntBASIC1.61□□□□□ -2.15
TRAF7Q6Q0C0 RNU7-188P-201ENST00000517063 64 ntBASIC1.61□□□□□ -2.15
TRAF7Q6Q0C0 RNY1P9-201ENST00000532431 109 ntBASIC1.61□□□□□ -2.15
TRAF7Q6Q0C0 RNU1-29P-201ENST00000606574 126 ntBASIC1.61□□□□□ -2.15
TRAF7Q6Q0C0 MIR7107-201ENST00000611489 80 ntBASIC1.61□□□□□ -2.15
TRAF7Q6Q0C0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.6□□□□□ -2.15
TRAF7Q6Q0C0 Y_RNA.699-201ENST00000516803 93 ntBASIC1.6□□□□□ -2.15
TRAF7Q6Q0C0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TRAF7Q6Q0C0 Y_RNA.134-201ENST00000363435 105 ntBASIC1.59□□□□□ -2.15
TRAF7Q6Q0C0 RNU6-1036P-201ENST00000383959 104 ntBASIC1.59□□□□□ -2.15
TRAF7Q6Q0C0 MIR573-201ENST00000384964 99 ntBASIC1.59□□□□□ -2.15
TRAF7Q6Q0C0 SNORA17.4-201ENST00000391287 132 ntBASIC1.59□□□□□ -2.15
TRAF7Q6Q0C0 RNA5SP67-201ENST00000516422 131 ntBASIC1.59□□□□□ -2.15
TRAF7Q6Q0C0 AL445584.3-201ENST00000617173 78 ntBASIC1.59□□□□□ -2.15
TRAF7Q6Q0C0 SNORD26-201ENST00000384147 75 ntBASIC1.58□□□□□ -2.16
TRAF7Q6Q0C0 RNA5SP102-201ENST00000516865 106 ntBASIC1.58□□□□□ -2.16
TRAF7Q6Q0C0 AL353770.2-201ENST00000620024 78 ntBASIC1.58□□□□□ -2.16
TRAF7Q6Q0C0 MIR1304-201ENST00000408243 91 ntBASIC1.57□□□□□ -2.16
TRAF7Q6Q0C0 RPS29P23-201ENST00000458635 123 ntBASIC1.57□□□□□ -2.16
TRAF7Q6Q0C0 SNORD114-24-201ENST00000365029 72 ntBASIC1.56□□□□□ -2.16
TRAF7Q6Q0C0 Y_RNA.382-201ENST00000365672 114 ntBASIC1.56□□□□□ -2.16
TRAF7Q6Q0C0 RNY3P8-201ENST00000411366 126 ntBASIC1.56□□□□□ -2.16
TRAF7Q6Q0C0 RNU6-176P-201ENST00000517196 105 ntBASIC1.56□□□□□ -2.16
TRAF7Q6Q0C0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
TRAF7Q6Q0C0 SNORD115.2-201ENST00000391126 59 ntBASIC1.54□□□□□ -2.16
TRAF7Q6Q0C0 Y_RNA.613-201ENST00000410726 97 ntBASIC1.54□□□□□ -2.16
TRAF7Q6Q0C0 SNORD124-201ENST00000459577 104 ntBASIC1.54□□□□□ -2.16
TRAF7Q6Q0C0 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAF7Q6Q0C0 MIR5706-201ENST00000579841 80 ntBASIC1.54□□□□□ -2.16
TRAF7Q6Q0C0 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAF7Q6Q0C0 MIR96-201ENST00000362288 78 ntBASIC1.53□□□□□ -2.16
TRAF7Q6Q0C0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
TRAF7Q6Q0C0 MIR320A-201ENST00000385302 82 ntBASIC1.52□□□□□ -2.17
TRAF7Q6Q0C0 SNORD19-201ENST00000391191 68 ntBASIC1.52□□□□□ -2.17
TRAF7Q6Q0C0 MIR3660-201ENST00000584845 100 ntBASIC1.52□□□□□ -2.17
TRAF7Q6Q0C0 RNU6-732P-201ENST00000516033 103 ntBASIC1.51□□□□□ -2.17
TRAF7Q6Q0C0 RNA5SP169-201ENST00000517268 117 ntBASIC1.51□□□□□ -2.17
TRAF7Q6Q0C0 MIR26B-201ENST00000362251 77 ntBASIC1.5□□□□□ -2.17
TRAF7Q6Q0C0 SNORD114-22-201ENST00000365423 72 ntBASIC1.5□□□□□ -2.17
TRAF7Q6Q0C0 MIR618-201ENST00000385287 98 ntBASIC1.5□□□□□ -2.17
TRAF7Q6Q0C0 MIR548Q-201ENST00000408404 100 ntBASIC1.5□□□□□ -2.17
TRAF7Q6Q0C0 RNU6-955P-201ENST00000410497 104 ntBASIC1.5□□□□□ -2.17
TRAF7Q6Q0C0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.5□□□□□ -2.17
TRAF7Q6Q0C0 RNA5SP404-201ENST00000517118 132 ntBASIC1.5□□□□□ -2.17
TRAF7Q6Q0C0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
TRAF7Q6Q0C0 MIR18A-201ENST00000362310 71 ntBASIC1.49□□□□□ -2.17
TRAF7Q6Q0C0 MIR643-201ENST00000385267 97 ntBASIC1.49□□□□□ -2.17
TRAF7Q6Q0C0 MIR4452-201ENST00000583004 71 ntBASIC1.49□□□□□ -2.17
TRAF7Q6Q0C0 RN7SL660P-201ENST00000614852 299 ntBASIC1.48□□□□□ -2.17
TRAF7Q6Q0C0 snoR1.1-201ENST00000628177 80 ntBASIC1.48□□□□□ -2.17
TRAF7Q6Q0C0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
TRAF7Q6Q0C0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
TRAF7Q6Q0C0 snoU13.18-201ENST00000459483 104 ntBASIC1.47□□□□□ -2.17
TRAF7Q6Q0C0 RNA5SP255-201ENST00000516370 107 ntBASIC1.47□□□□□ -2.17
TRAF7Q6Q0C0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.46□□□□□ -2.18
TRAF7Q6Q0C0 RNU4-45P-201ENST00000365469 141 ntBASIC1.46□□□□□ -2.18
TRAF7Q6Q0C0 AP000676.1-201ENST00000533307 52 ntBASIC1.46□□□□□ -2.18
TRAF7Q6Q0C0 RNU1-93P-201ENST00000364704 169 ntBASIC1.45□□□□□ -2.18
TRAF7Q6Q0C0 RNU6-1232P-201ENST00000516299 86 ntBASIC1.45□□□□□ -2.18
TRAF7Q6Q0C0 SNORA62.4-201ENST00000365504 151 ntBASIC1.44□□□□□ -2.18
TRAF7Q6Q0C0 AC069271.1-201ENST00000445577 156 ntBASIC1.44□□□□□ -2.18
TRAF7Q6Q0C0 MIR6078-201ENST00000611069 100 ntBASIC1.44□□□□□ -2.18
TRAF7Q6Q0C0 RNA5SP61-201ENST00000516453 100 ntBASIC1.43□□□□□ -2.18
TRAF7Q6Q0C0 AC011195.1-201ENST00000578177 177 ntBASIC1.43□□□□□ -2.18
TRAF7Q6Q0C0 MIR4677-201ENST00000584153 80 ntBASIC1.43□□□□□ -2.18
TRAF7Q6Q0C0 Y_RNA.540-201ENST00000384638 111 ntBASIC1.42□□□□□ -2.18
TRAF7Q6Q0C0 SNORD99-201ENST00000408612 74 ntBASIC1.42□□□□□ -2.18
TRAF7Q6Q0C0 MIR6767-201ENST00000637302 66 ntBASIC1.42□□□□□ -2.18
TRAF7Q6Q0C0 RNU6-836P-201ENST00000362920 107 ntBASIC1.41□□□□□ -2.18
TRAF7Q6Q0C0 Y_RNA.406-201ENST00000383984 100 ntBASIC1.41□□□□□ -2.18
TRAF7Q6Q0C0 MIR548N-201ENST00000408742 75 ntBASIC1.41□□□□□ -2.18
TRAF7Q6Q0C0 AP002795.1-201ENST00000534879 84 ntBASIC1.41□□□□□ -2.18
TRAF7Q6Q0C0 uc_338.36-201ENST00000622331 158 ntBASIC1.41□□□□□ -2.18
TRAF7Q6Q0C0 SNORD60-201ENST00000383903 83 ntBASIC1.4□□□□□ -2.19
TRAF7Q6Q0C0 RNU6-608P-201ENST00000383927 104 ntBASIC1.4□□□□□ -2.19
TRAF7Q6Q0C0 AC084368.1-201ENST00000620935 65 ntBASIC1.4□□□□□ -2.19
TRAF7Q6Q0C0 RNU6-1233P-201ENST00000362922 102 ntBASIC1.39□□□□□ -2.19
TRAF7Q6Q0C0 Y_RNA.320-201ENST00000365144 102 ntBASIC1.39□□□□□ -2.19
TRAF7Q6Q0C0 RNU6-68P-201ENST00000516576 104 ntBASIC1.39□□□□□ -2.19
TRAF7Q6Q0C0 AC068338.1-201ENST00000565567 176 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 248.8 ms