Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RNU1-42P-201ENST00000364033 160 ntBASIC1.69□□□□□ -2.14
VARS2Q5ST30 SNORD63.1-201ENST00000516178 80 ntBASIC1.69□□□□□ -2.14
VARS2Q5ST30 RNU6-1174P-201ENST00000517278 101 ntBASIC1.69□□□□□ -2.14
VARS2Q5ST30 MIR6507-201ENST00000613630 70 ntBASIC1.69□□□□□ -2.14
VARS2Q5ST30 MIR6779-201ENST00000617283 64 ntBASIC1.69□□□□□ -2.14
VARS2Q5ST30 MIR4317-201ENST00000637586 65 ntBASIC1.69□□□□□ -2.14
VARS2Q5ST30 SNORD114-22-201ENST00000365423 72 ntBASIC1.68□□□□□ -2.14
VARS2Q5ST30 RNU4-45P-201ENST00000365469 141 ntBASIC1.68□□□□□ -2.14
VARS2Q5ST30 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
VARS2Q5ST30 MIR3170-201ENST00000582699 77 ntBASIC1.68□□□□□ -2.14
VARS2Q5ST30 RNU6-1047P-201ENST00000364418 107 ntBASIC1.67□□□□□ -2.14
VARS2Q5ST30 MIR19B1-201ENST00000384829 87 ntBASIC1.67□□□□□ -2.14
VARS2Q5ST30 RNU6-1036P-201ENST00000383959 104 ntBASIC1.66□□□□□ -2.14
VARS2Q5ST30 SNORA67.6-201ENST00000391093 99 ntBASIC1.66□□□□□ -2.14
VARS2Q5ST30 MIR1323-201ENST00000408090 73 ntBASIC1.66□□□□□ -2.14
VARS2Q5ST30 RNU7-88P-201ENST00000458752 63 ntBASIC1.66□□□□□ -2.14
VARS2Q5ST30 MIR4285-201ENST00000581001 85 ntBASIC1.65□□□□□ -2.15
VARS2Q5ST30 MIR6515-201ENST00000619843 57 ntBASIC1.65□□□□□ -2.15
VARS2Q5ST30 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.65□□□□□ -2.15
VARS2Q5ST30 RNA5SP363-201ENST00000365072 115 ntBASIC1.64□□□□□ -2.15
VARS2Q5ST30 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
VARS2Q5ST30 RNU6-997P-201ENST00000384725 107 ntBASIC1.64□□□□□ -2.15
VARS2Q5ST30 MIR200A-201ENST00000384875 90 ntBASIC1.64□□□□□ -2.15
VARS2Q5ST30 MIR4421-201ENST00000578133 69 ntBASIC1.64□□□□□ -2.15
VARS2Q5ST30 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.64□□□□□ -2.15
VARS2Q5ST30 RNA5SP327-201ENST00000362494 101 ntBASIC1.63□□□□□ -2.15
VARS2Q5ST30 AC022709.1-201ENST00000615967 87 ntBASIC1.63□□□□□ -2.15
VARS2Q5ST30 SNORD124-201ENST00000459577 104 ntBASIC1.62□□□□□ -2.15
VARS2Q5ST30 AC011195.1-201ENST00000578177 177 ntBASIC1.62□□□□□ -2.15
VARS2Q5ST30 SNORA31.24-201ENST00000517232 57 ntBASIC1.61□□□□□ -2.15
VARS2Q5ST30 U7.6-201ENST00000610841 64 ntBASIC1.61□□□□□ -2.15
VARS2Q5ST30 MIR4464-201ENST00000580818 92 ntBASIC1.6□□□□□ -2.15
VARS2Q5ST30 MIR1468-201ENST00000410600 86 ntBASIC1.59□□□□□ -2.15
VARS2Q5ST30 AC104408.1-201ENST00000605241 170 ntBASIC1.59□□□□□ -2.15
VARS2Q5ST30 AL353770.2-201ENST00000620024 78 ntBASIC1.59□□□□□ -2.15
VARS2Q5ST30 MIR6888-201ENST00000621977 67 ntBASIC1.59□□□□□ -2.15
VARS2Q5ST30 MIR1304-201ENST00000408243 91 ntBASIC1.58□□□□□ -2.16
VARS2Q5ST30 AC069271.1-201ENST00000445577 156 ntBASIC1.58□□□□□ -2.16
VARS2Q5ST30 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.58□□□□□ -2.16
VARS2Q5ST30 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.57□□□□□ -2.16
VARS2Q5ST30 RNU6-1111P-201ENST00000391118 107 ntBASIC1.57□□□□□ -2.16
VARS2Q5ST30 SNORD99-201ENST00000408612 74 ntBASIC1.57□□□□□ -2.16
VARS2Q5ST30 RNA5SP255-201ENST00000516370 107 ntBASIC1.57□□□□□ -2.16
VARS2Q5ST30 PVT1_3.1-201ENST00000620853 95 ntBASIC1.57□□□□□ -2.16
VARS2Q5ST30 MIR4426-201ENST00000640330 63 ntBASIC1.57□□□□□ -2.16
VARS2Q5ST30 MIR6078-201ENST00000611069 100 ntBASIC1.56□□□□□ -2.16
VARS2Q5ST30 AL445584.3-201ENST00000617173 78 ntBASIC1.56□□□□□ -2.16
VARS2Q5ST30 MIR4677-201ENST00000584153 80 ntBASIC1.55□□□□□ -2.16
VARS2Q5ST30 SNORA2A-201ENST00000383885 135 ntBASIC1.54□□□□□ -2.16
VARS2Q5ST30 RNU6-258P-201ENST00000390884 101 ntBASIC1.54□□□□□ -2.16
VARS2Q5ST30 MIR96-201ENST00000362288 78 ntBASIC1.53□□□□□ -2.16
VARS2Q5ST30 Y_RNA.374-201ENST00000365606 101 ntBASIC1.53□□□□□ -2.16
VARS2Q5ST30 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
VARS2Q5ST30 MIR598-201ENST00000384868 97 ntBASIC1.53□□□□□ -2.16
VARS2Q5ST30 RN7SL660P-201ENST00000614852 299 ntBASIC1.53□□□□□ -2.16
VARS2Q5ST30 snoR1.1-201ENST00000628177 80 ntBASIC1.53□□□□□ -2.16
VARS2Q5ST30 RNU6-1232P-201ENST00000516299 86 ntBASIC1.51□□□□□ -2.17
VARS2Q5ST30 RNU6-229P-201ENST00000516614 102 ntBASIC1.51□□□□□ -2.17
VARS2Q5ST30 AC084368.1-201ENST00000620935 65 ntBASIC1.51□□□□□ -2.17
VARS2Q5ST30 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
VARS2Q5ST30 RNA5SP517-201ENST00000364724 117 ntBASIC1.5□□□□□ -2.17
VARS2Q5ST30 SNORD114-24-201ENST00000365029 72 ntBASIC1.5□□□□□ -2.17
VARS2Q5ST30 MIR320A-201ENST00000385302 82 ntBASIC1.5□□□□□ -2.17
VARS2Q5ST30 MIR501-201ENST00000390204 84 ntBASIC1.5□□□□□ -2.17
VARS2Q5ST30 Y_RNA.613-201ENST00000410726 97 ntBASIC1.5□□□□□ -2.17
VARS2Q5ST30 RNU6-1238P-201ENST00000517215 102 ntBASIC1.5□□□□□ -2.17
VARS2Q5ST30 AP000676.1-201ENST00000533307 52 ntBASIC1.5□□□□□ -2.17
VARS2Q5ST30 SNORA27.2-201ENST00000363365 126 ntBASIC1.48□□□□□ -2.17
VARS2Q5ST30 RNU1-93P-201ENST00000364704 169 ntBASIC1.48□□□□□ -2.17
VARS2Q5ST30 SNORA62.4-201ENST00000365504 151 ntBASIC1.48□□□□□ -2.17
VARS2Q5ST30 MIR520E-201ENST00000384867 87 ntBASIC1.47□□□□□ -2.17
VARS2Q5ST30 MIR618-201ENST00000385287 98 ntBASIC1.47□□□□□ -2.17
VARS2Q5ST30 RNU6-955P-201ENST00000410497 104 ntBASIC1.47□□□□□ -2.17
VARS2Q5ST30 RNA5SP222-201ENST00000411039 105 ntBASIC1.47□□□□□ -2.17
VARS2Q5ST30 RPS29P1-201ENST00000465274 159 ntBASIC1.47□□□□□ -2.17
VARS2Q5ST30 RNU6-361P-201ENST00000364454 107 ntBASIC1.46□□□□□ -2.18
VARS2Q5ST30 MIR106A-201ENST00000384870 81 ntBASIC1.45□□□□□ -2.18
VARS2Q5ST30 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.45□□□□□ -2.18
VARS2Q5ST30 RNU6-732P-201ENST00000516033 103 ntBASIC1.45□□□□□ -2.18
VARS2Q5ST30 MIR151B-201ENST00000584249 96 ntBASIC1.45□□□□□ -2.18
VARS2Q5ST30 SNORA25.18-201ENST00000607153 114 ntBASIC1.45□□□□□ -2.18
VARS2Q5ST30 MIR520D-201ENST00000385002 87 ntBASIC1.44□□□□□ -2.18
VARS2Q5ST30 MIR876-201ENST00000401147 81 ntBASIC1.44□□□□□ -2.18
VARS2Q5ST30 RPS29P23-201ENST00000458635 123 ntBASIC1.44□□□□□ -2.18
VARS2Q5ST30 Y_RNA.699-201ENST00000516803 93 ntBASIC1.44□□□□□ -2.18
VARS2Q5ST30 MIR6788-201ENST00000618842 66 ntBASIC1.44□□□□□ -2.18
VARS2Q5ST30 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
VARS2Q5ST30 SNORD118-201ENST00000363593 134 ntBASIC1.43□□□□□ -2.18
VARS2Q5ST30 Y_RNA.423-201ENST00000384057 113 ntBASIC1.43□□□□□ -2.18
VARS2Q5ST30 RNU1-124P-201ENST00000363861 145 ntBASIC1.42□□□□□ -2.18
VARS2Q5ST30 RNU6-300P-201ENST00000459080 104 ntBASIC1.42□□□□□ -2.18
VARS2Q5ST30 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
VARS2Q5ST30 ACA64.5-201ENST00000516207 127 ntBASIC1.41□□□□□ -2.18
VARS2Q5ST30 MIR548J-201ENST00000408833 112 ntBASIC1.4□□□□□ -2.19
VARS2Q5ST30 RNU6-848P-201ENST00000515948 107 ntBASIC1.4□□□□□ -2.19
VARS2Q5ST30 RNU6-617P-201ENST00000516147 107 ntBASIC1.4□□□□□ -2.19
VARS2Q5ST30 RNU6-473P-201ENST00000516164 107 ntBASIC1.4□□□□□ -2.19
VARS2Q5ST30 RNU6-1049P-201ENST00000516414 107 ntBASIC1.4□□□□□ -2.19
VARS2Q5ST30 RNA5SP61-201ENST00000516453 100 ntBASIC1.4□□□□□ -2.19
VARS2Q5ST30 MIR3660-201ENST00000584845 100 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 269.6 ms