Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 U6.96-201ENST00000636425 70 ntBASIC0.79□□□□□ -2.28
ERVFC1P60507 AL021921.1-201ENST00000442774 93 ntBASIC0.78□□□□□ -2.28
ERVFC1P60507 RNU6-229P-201ENST00000516614 102 ntBASIC0.78□□□□□ -2.28
ERVFC1P60507 AC243829.3-201ENST00000622177 108 ntBASIC0.78□□□□□ -2.28
ERVFC1P60507 AC010487.4-201ENST00000637027 61 ntBASIC0.78□□□□□ -2.28
ERVFC1P60507 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
ERVFC1P60507 SNORD114-23-201ENST00000363536 72 ntBASIC0.77□□□□□ -2.29
ERVFC1P60507 Y_RNA.246-201ENST00000364495 108 ntBASIC0.77□□□□□ -2.29
ERVFC1P60507 RNA5SP193-201ENST00000410353 107 ntBASIC0.77□□□□□ -2.29
ERVFC1P60507 AC098934.3-201ENST00000430450 190 ntBASIC0.77□□□□□ -2.29
ERVFC1P60507 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
ERVFC1P60507 RNU6-863P-201ENST00000515989 104 ntBASIC0.76□□□□□ -2.29
ERVFC1P60507 MIR548AD-201ENST00000584780 82 ntBASIC0.76□□□□□ -2.29
ERVFC1P60507 MIR6755-201ENST00000619993 66 ntBASIC0.76□□□□□ -2.29
ERVFC1P60507 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
ERVFC1P60507 Y_RNA.115-201ENST00000363272 98 ntBASIC0.75□□□□□ -2.29
ERVFC1P60507 MIR4677-201ENST00000584153 80 ntBASIC0.75□□□□□ -2.29
ERVFC1P60507 AC090617.8-201ENST00000623339 167 ntBASIC0.75□□□□□ -2.29
ERVFC1P60507 Y_RNA.423-201ENST00000384057 113 ntBASIC0.74□□□□□ -2.29
ERVFC1P60507 Y_RNA.433-201ENST00000384089 102 ntBASIC0.74□□□□□ -2.29
ERVFC1P60507 MIR501-201ENST00000390204 84 ntBASIC0.74□□□□□ -2.29
ERVFC1P60507 RNU6-1232P-201ENST00000516299 86 ntBASIC0.74□□□□□ -2.29
ERVFC1P60507 RNU6-175P-201ENST00000516896 107 ntBASIC0.74□□□□□ -2.29
ERVFC1P60507 RNU7-188P-201ENST00000517063 64 ntBASIC0.74□□□□□ -2.29
ERVFC1P60507 Y_RNA.74-201ENST00000362911 99 ntBASIC0.73□□□□□ -2.29
ERVFC1P60507 Y_RNA.325-201ENST00000365171 122 ntBASIC0.73□□□□□ -2.29
ERVFC1P60507 SNORA49-201ENST00000386157 136 ntBASIC0.73□□□□□ -2.29
ERVFC1P60507 RNU6-337P-201ENST00000391243 106 ntBASIC0.73□□□□□ -2.29
ERVFC1P60507 RNU4-54P-201ENST00000516428 129 ntBASIC0.73□□□□□ -2.29
ERVFC1P60507 MIR4711-201ENST00000578274 70 ntBASIC0.72□□□□□ -2.29
ERVFC1P60507 RNU6-520P-201ENST00000384717 104 ntBASIC0.71□□□□□ -2.3
ERVFC1P60507 RNU6-518P-201ENST00000516056 96 ntBASIC0.71□□□□□ -2.3
ERVFC1P60507 MIR6773-201ENST00000612812 74 ntBASIC0.71□□□□□ -2.3
ERVFC1P60507 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.71□□□□□ -2.3
ERVFC1P60507 SNORA41B-201ENST00000384785 128 ntBASIC0.7□□□□□ -2.3
ERVFC1P60507 MIR519A2-201ENST00000384990 87 ntBASIC0.7□□□□□ -2.3
ERVFC1P60507 MIR1255B2-201ENST00000408618 67 ntBASIC0.7□□□□□ -2.3
ERVFC1P60507 RNU7-154P-201ENST00000516194 62 ntBASIC0.7□□□□□ -2.3
ERVFC1P60507 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
ERVFC1P60507 RNA5SP347-201ENST00000362445 119 ntBASIC0.69□□□□□ -2.3
ERVFC1P60507 RNA5SP499-201ENST00000363982 119 ntBASIC0.69□□□□□ -2.3
ERVFC1P60507 RNA5SP128-201ENST00000365305 116 ntBASIC0.69□□□□□ -2.3
ERVFC1P60507 MIR876-201ENST00000401147 81 ntBASIC0.69□□□□□ -2.3
ERVFC1P60507 RNA5SP470-201ENST00000516463 106 ntBASIC0.69□□□□□ -2.3
ERVFC1P60507 AC084368.1-201ENST00000620935 65 ntBASIC0.69□□□□□ -2.3
ERVFC1P60507 SNORA9.1-201ENST00000362412 131 ntBASIC0.68□□□□□ -2.3
ERVFC1P60507 RNA5SP257-201ENST00000363023 116 ntBASIC0.68□□□□□ -2.3
ERVFC1P60507 MIR760-201ENST00000390220 80 ntBASIC0.68□□□□□ -2.3
ERVFC1P60507 MIR8087-201ENST00000612745 78 ntBASIC0.68□□□□□ -2.3
ERVFC1P60507 RNU6-502P-201ENST00000362419 108 ntBASIC0.67□□□□□ -2.3
ERVFC1P60507 SNORD113-4-201ENST00000364802 75 ntBASIC0.67□□□□□ -2.3
ERVFC1P60507 SNORD116-16-201ENST00000384533 92 ntBASIC0.67□□□□□ -2.3
ERVFC1P60507 MIRLET7B-201ENST00000385140 83 ntBASIC0.67□□□□□ -2.3
ERVFC1P60507 RNU6-1246P-201ENST00000391064 107 ntBASIC0.67□□□□□ -2.3
ERVFC1P60507 RNA5SP330-201ENST00000517096 96 ntBASIC0.67□□□□□ -2.3
ERVFC1P60507 SNORD44.1-201ENST00000363202 61 ntBASIC0.66□□□□□ -2.3
ERVFC1P60507 MIR3925-201ENST00000584674 77 ntBASIC0.66□□□□□ -2.3
ERVFC1P60507 MIR330-201ENST00000362196 94 ntBASIC0.65□□□□□ -2.31
ERVFC1P60507 SNORD115-25-201ENST00000362619 82 ntBASIC0.65□□□□□ -2.31
ERVFC1P60507 Y_RNA.282-201ENST00000364793 102 ntBASIC0.65□□□□□ -2.31
ERVFC1P60507 MIR106A-201ENST00000384870 81 ntBASIC0.65□□□□□ -2.31
ERVFC1P60507 RN7SL660P-201ENST00000614852 299 ntBASIC0.65□□□□□ -2.31
ERVFC1P60507 RNU6-1036P-201ENST00000383959 104 ntBASIC0.64□□□□□ -2.31
ERVFC1P60507 RNU7-119P-201ENST00000459279 63 ntBASIC0.64□□□□□ -2.31
ERVFC1P60507 RNA5SP121-201ENST00000516537 101 ntBASIC0.64□□□□□ -2.31
ERVFC1P60507 RNA5SP62-201ENST00000363457 110 ntBASIC0.63□□□□□ -2.31
ERVFC1P60507 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.63□□□□□ -2.31
ERVFC1P60507 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.63□□□□□ -2.31
ERVFC1P60507 Y_RNA.722-201ENST00000517279 114 ntBASIC0.63□□□□□ -2.31
ERVFC1P60507 RNU6-808P-201ENST00000391233 108 ntBASIC0.62□□□□□ -2.31
ERVFC1P60507 MIR5087-201ENST00000635826 76 ntBASIC0.62□□□□□ -2.31
ERVFC1P60507 RNU6-945P-201ENST00000383947 107 ntBASIC0.61□□□□□ -2.31
ERVFC1P60507 MIR7978-201ENST00000636158 59 ntBASIC0.61□□□□□ -2.31
ERVFC1P60507 MIR527-201ENST00000385244 85 ntBASIC0.6□□□□□ -2.31
ERVFC1P60507 RNU6-231P-201ENST00000517122 103 ntBASIC0.6□□□□□ -2.31
ERVFC1P60507 MIR499B-201ENST00000636498 73 ntBASIC0.6□□□□□ -2.31
ERVFC1P60507 RNU6-782P-201ENST00000516852 104 ntBASIC0.59□□□□□ -2.31
ERVFC1P60507 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
ERVFC1P60507 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.58□□□□□ -2.32
ERVFC1P60507 SNORD115-23-201ENST00000364461 82 ntBASIC0.57□□□□□ -2.32
ERVFC1P60507 RNU6-1184P-201ENST00000384588 108 ntBASIC0.57□□□□□ -2.32
ERVFC1P60507 RNU6-246P-201ENST00000384702 107 ntBASIC0.57□□□□□ -2.32
ERVFC1P60507 MIR1197-201ENST00000408818 88 ntBASIC0.57□□□□□ -2.32
ERVFC1P60507 SCARNA11.2-201ENST00000517183 154 ntBASIC0.57□□□□□ -2.32
ERVFC1P60507 MIR548AG1-201ENST00000579932 66 ntBASIC0.57□□□□□ -2.32
ERVFC1P60507 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.56□□□□□ -2.32
ERVFC1P60507 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.56□□□□□ -2.32
ERVFC1P60507 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
ERVFC1P60507 MIR429-201ENST00000362106 83 ntBASIC0.55□□□□□ -2.32
ERVFC1P60507 RNU6-1312P-201ENST00000362425 108 ntBASIC0.55□□□□□ -2.32
ERVFC1P60507 SNORA68.3-201ENST00000515906 83 ntBASIC0.55□□□□□ -2.32
ERVFC1P60507 SNORA62.5-201ENST00000516634 120 ntBASIC0.55□□□□□ -2.32
ERVFC1P60507 RNU6-936P-201ENST00000384005 107 ntBASIC0.54□□□□□ -2.32
ERVFC1P60507 MIR7110-201ENST00000612638 86 ntBASIC0.54□□□□□ -2.32
ERVFC1P60507 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.54□□□□□ -2.32
ERVFC1P60507 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
ERVFC1P60507 MIR103A1-201ENST00000362165 78 ntBASIC0.53□□□□□ -2.32
ERVFC1P60507 MIRLET7D-201ENST00000362263 87 ntBASIC0.53□□□□□ -2.32
ERVFC1P60507 RNA5SP98-201ENST00000363158 137 ntBASIC0.53□□□□□ -2.32
ERVFC1P60507 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 222.5 ms