Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.27□□□□□ -2.45
SOX3P41225 AC074348.1-201ENST00000426503 132 ntBASIC-0.27□□□□□ -2.45
SOX3P41225 MIR5704-201ENST00000584029 77 ntBASIC-0.27□□□□□ -2.45
SOX3P41225 AC062037.1-201ENST00000605302 128 ntBASIC-0.27□□□□□ -2.45
SOX3P41225 MIR8068-201ENST00000618032 68 ntBASIC-0.27□□□□□ -2.45
SOX3P41225 MIR6086-201ENST00000638065 55 ntBASIC-0.27□□□□□ -2.45
SOX3P41225 SNORD115-23-201ENST00000364461 82 ntBASIC-0.28□□□□□ -2.45
SOX3P41225 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.28□□□□□ -2.45
SOX3P41225 RNU6-686P-201ENST00000364839 107 ntBASIC-0.28□□□□□ -2.45
SOX3P41225 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.28□□□□□ -2.45
SOX3P41225 RNU6-787P-201ENST00000384032 107 ntBASIC-0.28□□□□□ -2.45
SOX3P41225 RNU6-30P-201ENST00000384561 107 ntBASIC-0.28□□□□□ -2.45
SOX3P41225 SNORD2-201ENST00000459163 69 ntBASIC-0.28□□□□□ -2.45
SOX3P41225 RNA5SP170-201ENST00000517150 101 ntBASIC-0.28□□□□□ -2.45
SOX3P41225 MIR4493-201ENST00000584016 73 ntBASIC-0.28□□□□□ -2.45
SOX3P41225 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.29□□□□□ -2.46
SOX3P41225 SNORA32.3-201ENST00000384772 121 ntBASIC-0.29□□□□□ -2.46
SOX3P41225 RNU7-171P-201ENST00000459581 62 ntBASIC-0.29□□□□□ -2.46
SOX3P41225 RNU6-758P-201ENST00000516292 89 ntBASIC-0.29□□□□□ -2.46
SOX3P41225 RNU6-752P-201ENST00000516376 102 ntBASIC-0.29□□□□□ -2.46
SOX3P41225 U6.96-201ENST00000636425 70 ntBASIC-0.29□□□□□ -2.46
SOX3P41225 MIR4788-201ENST00000639104 80 ntBASIC-0.29□□□□□ -2.46
SOX3P41225 MIR101-1-201ENST00000362265 75 ntBASIC-0.3□□□□□ -2.46
SOX3P41225 MIR604-201ENST00000384880 94 ntBASIC-0.3□□□□□ -2.46
SOX3P41225 AL445193.1-201ENST00000441183 141 ntBASIC-0.3□□□□□ -2.46
SOX3P41225 RNU6-303P-201ENST00000517091 106 ntBASIC-0.3□□□□□ -2.46
SOX3P41225 RNA5SP169-201ENST00000517268 117 ntBASIC-0.3□□□□□ -2.46
SOX3P41225 MIR4484-201ENST00000582855 83 ntBASIC-0.3□□□□□ -2.46
SOX3P41225 MIR6739-201ENST00000622461 75 ntBASIC-0.3□□□□□ -2.46
SOX3P41225 AL391099.1-201ENST00000624635 187 ntBASIC-0.3□□□□□ -2.46
SOX3P41225 RNU6-681P-201ENST00000364012 104 ntBASIC-0.31□□□□□ -2.46
SOX3P41225 RNU6-973P-201ENST00000364690 107 ntBASIC-0.31□□□□□ -2.46
SOX3P41225 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.31□□□□□ -2.46
SOX3P41225 MIR450A2-201ENST00000385022 100 ntBASIC-0.31□□□□□ -2.46
SOX3P41225 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.31□□□□□ -2.46
SOX3P41225 AC114755.3-201ENST00000481111 251 ntBASIC-0.31□□□□□ -2.46
SOX3P41225 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.31□□□□□ -2.46
SOX3P41225 MIR521-2-201ENST00000384818 87 ntBASIC-0.32□□□□□ -2.46
SOX3P41225 SNORD75.1-201ENST00000408373 60 ntBASIC-0.32□□□□□ -2.46
SOX3P41225 RNA5SP451-201ENST00000410588 110 ntBASIC-0.32□□□□□ -2.46
SOX3P41225 SNORD38.3-201ENST00000516599 73 ntBASIC-0.32□□□□□ -2.46
SOX3P41225 RNA5SP476-201ENST00000516613 103 ntBASIC-0.32□□□□□ -2.46
SOX3P41225 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.32□□□□□ -2.46
SOX3P41225 RNU6-656P-201ENST00000516785 107 ntBASIC-0.32□□□□□ -2.46
SOX3P41225 MIR4263-201ENST00000584745 83 ntBASIC-0.32□□□□□ -2.46
SOX3P41225 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.33□□□□□ -2.46
SOX3P41225 RNA5SP25-201ENST00000410815 110 ntBASIC-0.33□□□□□ -2.46
SOX3P41225 RNU4-63P-201ENST00000411313 118 ntBASIC-0.33□□□□□ -2.46
SOX3P41225 RNA5SP66-201ENST00000517178 101 ntBASIC-0.33□□□□□ -2.46
SOX3P41225 CYP3A54P-201ENST00000566950 75 ntBASIC-0.33□□□□□ -2.46
SOX3P41225 MIR548AZ-201ENST00000616567 95 ntBASIC-0.33□□□□□ -2.46
SOX3P41225 MIR664A-201ENST00000626086 82 ntBASIC-0.33□□□□□ -2.46
SOX3P41225 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.34□□□□□ -2.46
SOX3P41225 SNORD73B-201ENST00000364394 72 ntBASIC-0.34□□□□□ -2.46
SOX3P41225 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.34□□□□□ -2.46
SOX3P41225 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.34□□□□□ -2.46
SOX3P41225 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.34□□□□□ -2.46
SOX3P41225 SNORA8.1-201ENST00000384250 140 ntBASIC-0.34□□□□□ -2.46
SOX3P41225 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.34□□□□□ -2.46
SOX3P41225 RNU6-901P-201ENST00000384593 106 ntBASIC-0.34□□□□□ -2.46
SOX3P41225 MIR224-201ENST00000384889 81 ntBASIC-0.34□□□□□ -2.46
SOX3P41225 RPS29P8-201ENST00000445109 171 ntBASIC-0.34□□□□□ -2.46
SOX3P41225 SCARNA18B-201ENST00000458806 135 ntBASIC-0.34□□□□□ -2.46
SOX3P41225 HAR1A.1-201ENST00000459583 118 ntBASIC-0.34□□□□□ -2.46
SOX3P41225 MIR3675-201ENST00000583661 73 ntBASIC-0.34□□□□□ -2.46
SOX3P41225 MIR4712-201ENST00000583750 82 ntBASIC-0.34□□□□□ -2.46
SOX3P41225 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.35□□□□□ -2.47
SOX3P41225 SNORD14C-201ENST00000365382 88 ntBASIC-0.35□□□□□ -2.47
SOX3P41225 MIR1255B2-201ENST00000408618 67 ntBASIC-0.35□□□□□ -2.47
SOX3P41225 snoU13.19-201ENST00000459148 104 ntBASIC-0.35□□□□□ -2.47
SOX3P41225 RNU6-881P-201ENST00000516813 102 ntBASIC-0.35□□□□□ -2.47
SOX3P41225 MIR4464-201ENST00000580818 92 ntBASIC-0.35□□□□□ -2.47
SOX3P41225 MIR4432-201ENST00000581823 84 ntBASIC-0.35□□□□□ -2.47
SOX3P41225 AC108676.2-201ENST00000605225 163 ntBASIC-0.35□□□□□ -2.47
SOX3P41225 MIR6851-201ENST00000617060 67 ntBASIC-0.35□□□□□ -2.47
SOX3P41225 RNU6-315P-201ENST00000362666 107 ntBASIC-0.36□□□□□ -2.47
SOX3P41225 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.36□□□□□ -2.47
SOX3P41225 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.36□□□□□ -2.47
SOX3P41225 RNU6-982P-201ENST00000516216 102 ntBASIC-0.36□□□□□ -2.47
SOX3P41225 MIR4666B-201ENST00000578142 81 ntBASIC-0.36□□□□□ -2.47
SOX3P41225 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.36□□□□□ -2.47
SOX3P41225 MIR1245B-201ENST00000636115 69 ntBASIC-0.36□□□□□ -2.47
SOX3P41225 SNORD114-15-201ENST00000364687 72 ntBASIC-0.37□□□□□ -2.47
SOX3P41225 RNU6-604P-201ENST00000390917 100 ntBASIC-0.37□□□□□ -2.47
SOX3P41225 SNORD126-201ENST00000459475 77 ntBASIC-0.37□□□□□ -2.47
SOX3P41225 MIR548AG1-201ENST00000579932 66 ntBASIC-0.37□□□□□ -2.47
SOX3P41225 RNU6-645P-201ENST00000364649 106 ntBASIC-0.38□□□□□ -2.47
SOX3P41225 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.38□□□□□ -2.47
SOX3P41225 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.38□□□□□ -2.47
SOX3P41225 MIR196A2-201ENST00000385189 110 ntBASIC-0.38□□□□□ -2.47
SOX3P41225 MIR3681-201ENST00000580089 72 ntBASIC-0.38□□□□□ -2.47
SOX3P41225 AL353803.5-201ENST00000599815 141 ntBASIC-0.38□□□□□ -2.47
SOX3P41225 MIR6854-201ENST00000614935 69 ntBASIC-0.38□□□□□ -2.47
SOX3P41225 AC093726.3-201ENST00000637588 150 ntBASIC-0.38□□□□□ -2.47
SOX3P41225 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.39□□□□□ -2.47
SOX3P41225 SNORD45.1-201ENST00000363181 77 ntBASIC-0.39□□□□□ -2.47
SOX3P41225 SNORD115-22-201ENST00000364456 82 ntBASIC-0.39□□□□□ -2.47
SOX3P41225 RNU6-573P-201ENST00000383938 106 ntBASIC-0.39□□□□□ -2.47
SOX3P41225 RNU6-820P-201ENST00000384273 107 ntBASIC-0.39□□□□□ -2.47
SOX3P41225 MIR519A2-201ENST00000384990 87 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 217.3 ms