Protein–RNA interactions for Protein: P16452

EPB42, Erythrocyte membrane protein band 4.2, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42P16452 MIR548AG1-201ENST00000579932 66 ntBASIC0.68□□□□□ -2.3
EPB42P16452 U6.59-201ENST00000615686 107 ntBASIC0.68□□□□□ -2.3
EPB42P16452 Y_RNA.236-201ENST00000364427 111 ntBASIC0.67□□□□□ -2.3
EPB42P16452 Y_RNA.676-201ENST00000516393 96 ntBASIC0.67□□□□□ -2.3
EPB42P16452 AP000676.1-201ENST00000533307 52 ntBASIC0.67□□□□□ -2.3
EPB42P16452 Y_RNA.224-201ENST00000364308 111 ntBASIC0.66□□□□□ -2.3
EPB42P16452 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
EPB42P16452 CYP3A137P-201ENST00000562436 69 ntBASIC0.66□□□□□ -2.3
EPB42P16452 MIRLET7D-201ENST00000362263 87 ntBASIC0.65□□□□□ -2.31
EPB42P16452 RNU6-815P-201ENST00000384080 113 ntBASIC0.65□□□□□ -2.31
EPB42P16452 MIR499A-201ENST00000384903 122 ntBASIC0.65□□□□□ -2.31
EPB42P16452 RNU6-127P-201ENST00000390897 107 ntBASIC0.65□□□□□ -2.31
EPB42P16452 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
EPB42P16452 Y_RNA.74-201ENST00000362911 99 ntBASIC0.63□□□□□ -2.31
EPB42P16452 MIR527-201ENST00000385244 85 ntBASIC0.63□□□□□ -2.31
EPB42P16452 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.63□□□□□ -2.31
EPB42P16452 Y_RNA.282-201ENST00000364793 102 ntBASIC0.62□□□□□ -2.31
EPB42P16452 MIR643-201ENST00000385267 97 ntBASIC0.62□□□□□ -2.31
EPB42P16452 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
EPB42P16452 SNORD113-4-201ENST00000364802 75 ntBASIC0.61□□□□□ -2.31
EPB42P16452 MIR548J-201ENST00000408833 112 ntBASIC0.61□□□□□ -2.31
EPB42P16452 RNU7-154P-201ENST00000516194 62 ntBASIC0.61□□□□□ -2.31
EPB42P16452 RNA5SP62-201ENST00000363457 110 ntBASIC0.6□□□□□ -2.31
EPB42P16452 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
EPB42P16452 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
EPB42P16452 MIR6788-201ENST00000618842 66 ntBASIC0.59□□□□□ -2.31
EPB42P16452 SNORD116-16-201ENST00000384533 92 ntBASIC0.58□□□□□ -2.32
EPB42P16452 MIR106A-201ENST00000384870 81 ntBASIC0.58□□□□□ -2.32
EPB42P16452 RNA5SP470-201ENST00000516463 106 ntBASIC0.58□□□□□ -2.32
EPB42P16452 MIR4714-201ENST00000580728 77 ntBASIC0.58□□□□□ -2.32
EPB42P16452 MIR151B-201ENST00000584249 96 ntBASIC0.58□□□□□ -2.32
EPB42P16452 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
EPB42P16452 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.57□□□□□ -2.32
EPB42P16452 AC108740.1-201ENST00000498629 225 ntBASIC0.57□□□□□ -2.32
EPB42P16452 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.57□□□□□ -2.32
EPB42P16452 MIR1287-201ENST00000408492 90 ntBASIC0.56□□□□□ -2.32
EPB42P16452 MIR6734-201ENST00000621166 68 ntBASIC0.56□□□□□ -2.32
EPB42P16452 RNU6-1312P-201ENST00000362425 108 ntBASIC0.55□□□□□ -2.32
EPB42P16452 RNA5SP98-201ENST00000363158 137 ntBASIC0.55□□□□□ -2.32
EPB42P16452 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.55□□□□□ -2.32
EPB42P16452 RNU6-231P-201ENST00000517122 103 ntBASIC0.55□□□□□ -2.32
EPB42P16452 AL353803.5-201ENST00000599815 141 ntBASIC0.55□□□□□ -2.32
EPB42P16452 MIR6514-201ENST00000622549 70 ntBASIC0.55□□□□□ -2.32
EPB42P16452 Y_RNA.226-201ENST00000364337 114 ntBASIC0.54□□□□□ -2.32
EPB42P16452 RNA5SP220-201ENST00000516298 104 ntBASIC0.54□□□□□ -2.32
EPB42P16452 AC069113.3-201ENST00000521019 150 ntBASIC0.54□□□□□ -2.32
EPB42P16452 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
EPB42P16452 AC090625.1-201ENST00000357130 210 ntBASIC0.53□□□□□ -2.32
EPB42P16452 Y_RNA.109-201ENST00000363215 102 ntBASIC0.53□□□□□ -2.32
EPB42P16452 MIR216A-201ENST00000385063 110 ntBASIC0.53□□□□□ -2.32
EPB42P16452 MIR5000-201ENST00000577717 103 ntBASIC0.53□□□□□ -2.32
EPB42P16452 uc_338.36-201ENST00000622331 158 ntBASIC0.53□□□□□ -2.32
EPB42P16452 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.33
EPB42P16452 SNORD115-23-201ENST00000364461 82 ntBASIC0.52□□□□□ -2.33
EPB42P16452 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.52□□□□□ -2.33
EPB42P16452 RNU6-141P-201ENST00000410499 105 ntBASIC0.52□□□□□ -2.33
EPB42P16452 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.52□□□□□ -2.33
EPB42P16452 MIR7978-201ENST00000636158 59 ntBASIC0.52□□□□□ -2.33
EPB42P16452 RNA5SP163-201ENST00000410304 99 ntBASIC0.51□□□□□ -2.33
EPB42P16452 RNA5SP247-201ENST00000411181 105 ntBASIC0.51□□□□□ -2.33
EPB42P16452 RNU6-1223P-201ENST00000517124 104 ntBASIC0.51□□□□□ -2.33
EPB42P16452 snoR1.1-201ENST00000628177 80 ntBASIC0.51□□□□□ -2.33
EPB42P16452 RNA5SP325-201ENST00000363756 130 ntBASIC0.5□□□□□ -2.33
EPB42P16452 RNU6-458P-201ENST00000384179 107 ntBASIC0.5□□□□□ -2.33
EPB42P16452 RNU6-246P-201ENST00000384702 107 ntBASIC0.5□□□□□ -2.33
EPB42P16452 SNORD116.2-201ENST00000391251 93 ntBASIC0.5□□□□□ -2.33
EPB42P16452 MIR548H2-201ENST00000408874 88 ntBASIC0.5□□□□□ -2.33
EPB42P16452 U6.58-201ENST00000613107 107 ntBASIC0.5□□□□□ -2.33
EPB42P16452 RNA5SP347-201ENST00000362445 119 ntBASIC0.49□□□□□ -2.33
EPB42P16452 SNORD1B-201ENST00000363091 84 ntBASIC0.49□□□□□ -2.33
EPB42P16452 RNU6-42P-201ENST00000384165 107 ntBASIC0.48□□□□□ -2.33
EPB42P16452 RNU6-520P-201ENST00000384717 104 ntBASIC0.48□□□□□ -2.33
EPB42P16452 RNU7-119P-201ENST00000459279 63 ntBASIC0.47□□□□□ -2.33
EPB42P16452 MIR4432-201ENST00000581823 84 ntBASIC0.47□□□□□ -2.33
EPB42P16452 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
EPB42P16452 MIR5087-201ENST00000635826 76 ntBASIC0.46□□□□□ -2.34
EPB42P16452 RNA5SP499-201ENST00000363982 119 ntBASIC0.45□□□□□ -2.34
EPB42P16452 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.45□□□□□ -2.34
EPB42P16452 RNU6-172P-201ENST00000411000 93 ntBASIC0.45□□□□□ -2.34
EPB42P16452 RNU6-1327P-201ENST00000365302 105 ntBASIC0.44□□□□□ -2.34
EPB42P16452 RNU6-936P-201ENST00000384005 107 ntBASIC0.44□□□□□ -2.34
EPB42P16452 MIR593-201ENST00000384856 100 ntBASIC0.44□□□□□ -2.34
EPB42P16452 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.44□□□□□ -2.34
EPB42P16452 MIR7110-201ENST00000612638 86 ntBASIC0.44□□□□□ -2.34
EPB42P16452 AL391099.1-201ENST00000624635 187 ntBASIC0.44□□□□□ -2.34
EPB42P16452 MIR429-201ENST00000362106 83 ntBASIC0.43□□□□□ -2.34
EPB42P16452 RNU6-1133P-201ENST00000410963 100 ntBASIC0.43□□□□□ -2.34
EPB42P16452 Y_RNA.722-201ENST00000517279 114 ntBASIC0.43□□□□□ -2.34
EPB42P16452 CR383656.4-201ENST00000546909 122 ntBASIC0.43□□□□□ -2.34
EPB42P16452 AC108676.2-201ENST00000605225 163 ntBASIC0.43□□□□□ -2.34
EPB42P16452 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.42□□□□□ -2.34
EPB42P16452 RNU6-455P-201ENST00000384681 107 ntBASIC0.42□□□□□ -2.34
EPB42P16452 Y_RNA.698-201ENST00000516798 118 ntBASIC0.42□□□□□ -2.34
EPB42P16452 SNORA40.16-201ENST00000517238 121 ntBASIC0.42□□□□□ -2.34
EPB42P16452 RNU7-55P-201ENST00000459426 62 ntBASIC0.41□□□□□ -2.34
EPB42P16452 RNU6-180P-201ENST00000516697 61 ntBASIC0.41□□□□□ -2.34
EPB42P16452 MIR6507-201ENST00000613630 70 ntBASIC0.41□□□□□ -2.34
EPB42P16452 MIR6513-201ENST00000621188 64 ntBASIC0.41□□□□□ -2.34
EPB42P16452 RNA5SP436-201ENST00000516020 115 ntBASIC0.4□□□□□ -2.35
EPB42P16452 MIR4464-201ENST00000580818 92 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 240.5 ms