Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.42□□□□□ -2.64
RAB3DO95716 MIR587-201ENST00000384845 96 ntBASIC-1.42□□□□□ -2.64
RAB3DO95716 MIR519C-201ENST00000385053 87 ntBASIC-1.42□□□□□ -2.64
RAB3DO95716 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.42□□□□□ -2.64
RAB3DO95716 AL035461.1-201ENST00000421490 332 ntBASIC-1.42□□□□□ -2.64
RAB3DO95716 MIR548AG1-201ENST00000579932 66 ntBASIC-1.42□□□□□ -2.64
RAB3DO95716 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.42□□□□□ -2.64
RAB3DO95716 RNU6-681P-201ENST00000364012 104 ntBASIC-1.43□□□□□ -2.64
RAB3DO95716 SNORD77.2-201ENST00000391045 68 ntBASIC-1.43□□□□□ -2.64
RAB3DO95716 AL021921.1-201ENST00000442774 93 ntBASIC-1.43□□□□□ -2.64
RAB3DO95716 RNU6-656P-201ENST00000516785 107 ntBASIC-1.43□□□□□ -2.64
RAB3DO95716 MIR6129-201ENST00000616087 109 ntBASIC-1.43□□□□□ -2.64
RAB3DO95716 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.44□□□□□ -2.64
RAB3DO95716 RNU6-959P-201ENST00000384671 107 ntBASIC-1.44□□□□□ -2.64
RAB3DO95716 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.44□□□□□ -2.64
RAB3DO95716 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.44□□□□□ -2.64
RAB3DO95716 MIR4306-201ENST00000583390 91 ntBASIC-1.44□□□□□ -2.64
RAB3DO95716 RNU6-209P-201ENST00000384118 107 ntBASIC-1.45□□□□□ -2.64
RAB3DO95716 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.45□□□□□ -2.64
RAB3DO95716 AL365222.1-201ENST00000614661 98 ntBASIC-1.45□□□□□ -2.64
RAB3DO95716 MIR29B1-201ENST00000385015 81 ntBASIC-1.46□□□□□ -2.64
RAB3DO95716 RNU7-134P-201ENST00000458997 64 ntBASIC-1.46□□□□□ -2.64
RAB3DO95716 AC008267.6-201ENST00000441664 139 ntBASIC-1.47□□□□□ -2.64
RAB3DO95716 RNU7-88P-201ENST00000458752 63 ntBASIC-1.47□□□□□ -2.64
RAB3DO95716 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.47□□□□□ -2.64
RAB3DO95716 U2.7-201ENST00000619197 100 ntBASIC-1.47□□□□□ -2.64
RAB3DO95716 MTATP8P2-201ENST00000435212 202 ntBASIC-1.48□□□□□ -2.65
RAB3DO95716 RNU6-766P-201ENST00000362478 107 ntBASIC-1.49□□□□□ -2.65
RAB3DO95716 RNU2-51P-201ENST00000410708 197 ntBASIC-1.49□□□□□ -2.65
RAB3DO95716 AL353691.2-201ENST00000443795 59 ntBASIC-1.49□□□□□ -2.65
RAB3DO95716 MIR6818-201ENST00000621576 65 ntBASIC-1.49□□□□□ -2.65
RAB3DO95716 AC132825.6-201ENST00000638861 357 ntBASIC-1.49□□□□□ -2.65
RAB3DO95716 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.49□□□□□ -2.65
RAB3DO95716 RNU6-633P-201ENST00000362612 103 ntBASIC-1.5□□□□□ -2.65
RAB3DO95716 RNU6-246P-201ENST00000384702 107 ntBASIC-1.5□□□□□ -2.65
RAB3DO95716 RNU4-61P-201ENST00000411243 107 ntBASIC-1.5□□□□□ -2.65
RAB3DO95716 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.5□□□□□ -2.65
RAB3DO95716 RNU6-732P-201ENST00000516033 103 ntBASIC-1.5□□□□□ -2.65
RAB3DO95716 RNA5SP67-201ENST00000516422 131 ntBASIC-1.5□□□□□ -2.65
RAB3DO95716 U7.5-201ENST00000517224 61 ntBASIC-1.5□□□□□ -2.65
RAB3DO95716 MIR4668-201ENST00000582284 70 ntBASIC-1.5□□□□□ -2.65
RAB3DO95716 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.5□□□□□ -2.65
RAB3DO95716 SNORD115-37-201ENST00000363768 82 ntBASIC-1.51□□□□□ -2.65
RAB3DO95716 RNA5SP192-201ENST00000364404 120 ntBASIC-1.51□□□□□ -2.65
RAB3DO95716 RNU6-645P-201ENST00000364649 106 ntBASIC-1.51□□□□□ -2.65
RAB3DO95716 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.51□□□□□ -2.65
RAB3DO95716 RNU6-30P-201ENST00000384561 107 ntBASIC-1.51□□□□□ -2.65
RAB3DO95716 snoU13.19-201ENST00000459148 104 ntBASIC-1.51□□□□□ -2.65
RAB3DO95716 RNU6-479P-201ENST00000516348 105 ntBASIC-1.51□□□□□ -2.65
RAB3DO95716 RNU6-589P-201ENST00000516485 107 ntBASIC-1.51□□□□□ -2.65
RAB3DO95716 MIR3115-201ENST00000577915 68 ntBASIC-1.51□□□□□ -2.65
RAB3DO95716 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.52□□□□□ -2.65
RAB3DO95716 MIR507-201ENST00000385234 94 ntBASIC-1.52□□□□□ -2.65
RAB3DO95716 AP002795.1-201ENST00000534879 84 ntBASIC-1.52□□□□□ -2.65
RAB3DO95716 RNA5SP26-201ENST00000362406 119 ntBASIC-1.53□□□□□ -2.65
RAB3DO95716 MIR548C-201ENST00000384815 97 ntBASIC-1.53□□□□□ -2.65
RAB3DO95716 SNORD19-201ENST00000391191 68 ntBASIC-1.53□□□□□ -2.65
RAB3DO95716 MIR3165-201ENST00000579874 75 ntBASIC-1.53□□□□□ -2.65
RAB3DO95716 RNU6-807P-201ENST00000516805 107 ntBASIC-1.54□□□□□ -2.66
RAB3DO95716 RNU6-158P-201ENST00000517104 100 ntBASIC-1.54□□□□□ -2.66
RAB3DO95716 RNU6-330P-201ENST00000363015 107 ntBASIC-1.55□□□□□ -2.66
RAB3DO95716 RNU6-624P-201ENST00000363411 107 ntBASIC-1.55□□□□□ -2.66
RAB3DO95716 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.55□□□□□ -2.66
RAB3DO95716 AC093729.1-201ENST00000513074 128 ntBASIC-1.55□□□□□ -2.66
RAB3DO95716 RNU6-81P-201ENST00000365608 104 ntBASIC-1.56□□□□□ -2.66
RAB3DO95716 RNU6-576P-201ENST00000390854 102 ntBASIC-1.56□□□□□ -2.66
RAB3DO95716 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.56□□□□□ -2.66
RAB3DO95716 MIR6086-201ENST00000638065 55 ntBASIC-1.56□□□□□ -2.66
RAB3DO95716 MIR450A1-201ENST00000362262 91 ntBASIC-1.57□□□□□ -2.66
RAB3DO95716 MIR5683-201ENST00000636514 76 ntBASIC-1.57□□□□□ -2.66
RAB3DO95716 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.58□□□□□ -2.66
RAB3DO95716 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.58□□□□□ -2.66
RAB3DO95716 SNORD57-201ENST00000448188 72 ntBASIC-1.58□□□□□ -2.66
RAB3DO95716 RNA5SP395-201ENST00000516567 118 ntBASIC-1.58□□□□□ -2.66
RAB3DO95716 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.58□□□□□ -2.66
RAB3DO95716 MIR2052-201ENST00000636055 55 ntBASIC-1.58□□□□□ -2.66
RAB3DO95716 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.59□□□□□ -2.66
RAB3DO95716 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.59□□□□□ -2.66
RAB3DO95716 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.59□□□□□ -2.66
RAB3DO95716 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.59□□□□□ -2.66
RAB3DO95716 MIR8485-201ENST00000401372 91 ntBASIC-1.59□□□□□ -2.66
RAB3DO95716 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.59□□□□□ -2.66
RAB3DO95716 RNU6-267P-201ENST00000516714 103 ntBASIC-1.59□□□□□ -2.66
RAB3DO95716 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.59□□□□□ -2.66
RAB3DO95716 MIR3675-201ENST00000583661 73 ntBASIC-1.59□□□□□ -2.66
RAB3DO95716 AC138207.3-201ENST00000585289 166 ntBASIC-1.59□□□□□ -2.66
RAB3DO95716 AL031737.1-201ENST00000450125 223 ntBASIC-1.6□□□□□ -2.67
RAB3DO95716 RNU6-834P-201ENST00000362367 110 ntBASIC-1.61□□□□□ -2.67
RAB3DO95716 RNU6-219P-201ENST00000364728 107 ntBASIC-1.61□□□□□ -2.67
RAB3DO95716 SNORD116-22-201ENST00000384430 92 ntBASIC-1.61□□□□□ -2.67
RAB3DO95716 MIR527-201ENST00000385244 85 ntBASIC-1.61□□□□□ -2.67
RAB3DO95716 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.61□□□□□ -2.67
RAB3DO95716 RNU6-402P-201ENST00000410678 103 ntBASIC-1.61□□□□□ -2.67
RAB3DO95716 RPL35AP4-201ENST00000412007 102 ntBASIC-1.61□□□□□ -2.67
RAB3DO95716 MIR4490-201ENST00000582647 84 ntBASIC-1.61□□□□□ -2.67
RAB3DO95716 MIR4320-201ENST00000636981 65 ntBASIC-1.61□□□□□ -2.67
RAB3DO95716 RNU6-478P-201ENST00000363904 110 ntBASIC-1.62□□□□□ -2.67
RAB3DO95716 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.62□□□□□ -2.67
RAB3DO95716 MIR548Q-201ENST00000408404 100 ntBASIC-1.62□□□□□ -2.67
RAB3DO95716 RNU6-982P-201ENST00000516216 102 ntBASIC-1.62□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms