Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RNA5SP192-201ENST00000364404 120 ntBASIC0.82□□□□□ -2.28
SOX1O00570 RNU6-92P-201ENST00000605893 104 ntBASIC0.82□□□□□ -2.28
SOX1O00570 AC243829.6-201ENST00000612652 106 ntBASIC0.82□□□□□ -2.28
SOX1O00570 MIR630-201ENST00000384957 97 ntBASIC0.81□□□□□ -2.28
SOX1O00570 RNU7-174P-201ENST00000516248 59 ntBASIC0.81□□□□□ -2.28
SOX1O00570 CYP3A54P-201ENST00000566950 75 ntBASIC0.81□□□□□ -2.28
SOX1O00570 MIR6759-201ENST00000638110 65 ntBASIC0.81□□□□□ -2.28
SOX1O00570 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
SOX1O00570 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SOX1O00570 RNU6-698P-201ENST00000363523 107 ntBASIC0.8□□□□□ -2.28
SOX1O00570 RNA5SP499-201ENST00000363982 119 ntBASIC0.8□□□□□ -2.28
SOX1O00570 RNU6-34P-201ENST00000364874 107 ntBASIC0.8□□□□□ -2.28
SOX1O00570 RNU6-863P-201ENST00000515989 104 ntBASIC0.8□□□□□ -2.28
SOX1O00570 RNU6-1232P-201ENST00000516299 86 ntBASIC0.8□□□□□ -2.28
SOX1O00570 MIR6755-201ENST00000619993 66 ntBASIC0.8□□□□□ -2.28
SOX1O00570 RNA5SP331-201ENST00000364986 107 ntBASIC0.79□□□□□ -2.28
SOX1O00570 SNORD113-2-201ENST00000391082 72 ntBASIC0.79□□□□□ -2.28
SOX1O00570 MIR4677-201ENST00000584153 80 ntBASIC0.79□□□□□ -2.28
SOX1O00570 MIR466-201ENST00000580653 84 ntBASIC0.78□□□□□ -2.28
SOX1O00570 MIR4653-201ENST00000585107 83 ntBASIC0.78□□□□□ -2.28
SOX1O00570 MIR501-201ENST00000390204 84 ntBASIC0.77□□□□□ -2.29
SOX1O00570 RNU7-188P-201ENST00000517063 64 ntBASIC0.77□□□□□ -2.29
SOX1O00570 MIR548AD-201ENST00000584780 82 ntBASIC0.77□□□□□ -2.29
SOX1O00570 AC084368.1-201ENST00000620935 65 ntBASIC0.77□□□□□ -2.29
SOX1O00570 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.77□□□□□ -2.29
SOX1O00570 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
SOX1O00570 MIR760-201ENST00000390220 80 ntBASIC0.76□□□□□ -2.29
SOX1O00570 MIR4514-201ENST00000581410 57 ntBASIC0.76□□□□□ -2.29
SOX1O00570 MTND4LP19-201ENST00000403051 166 ntBASIC0.75□□□□□ -2.29
SOX1O00570 RNU6-122P-201ENST00000516818 107 ntBASIC0.75□□□□□ -2.29
SOX1O00570 MIR633-201ENST00000384821 98 ntBASIC0.74□□□□□ -2.29
SOX1O00570 AL021921.1-201ENST00000442774 93 ntBASIC0.74□□□□□ -2.29
SOX1O00570 RNU6-351P-201ENST00000516097 100 ntBASIC0.74□□□□□ -2.29
SOX1O00570 MIR6866-201ENST00000638146 69 ntBASIC0.74□□□□□ -2.29
SOX1O00570 SNORD44.1-201ENST00000363202 61 ntBASIC0.73□□□□□ -2.29
SOX1O00570 RNA5SP128-201ENST00000365305 116 ntBASIC0.73□□□□□ -2.29
SOX1O00570 RNA5SP63-201ENST00000391225 112 ntBASIC0.73□□□□□ -2.29
SOX1O00570 RNU6-175P-201ENST00000516896 107 ntBASIC0.73□□□□□ -2.29
SOX1O00570 U4.4-201ENST00000620626 117 ntBASIC0.73□□□□□ -2.29
SOX1O00570 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
SOX1O00570 Y_RNA.246-201ENST00000364495 108 ntBASIC0.72□□□□□ -2.29
SOX1O00570 MIR4802-201ENST00000581881 80 ntBASIC0.72□□□□□ -2.29
SOX1O00570 AC090617.8-201ENST00000623339 167 ntBASIC0.72□□□□□ -2.29
SOX1O00570 SNORD60.1-201ENST00000362451 73 ntBASIC0.71□□□□□ -2.3
SOX1O00570 RNU6-945P-201ENST00000383947 107 ntBASIC0.71□□□□□ -2.3
SOX1O00570 MIR146A-201ENST00000385201 99 ntBASIC0.71□□□□□ -2.3
SOX1O00570 AC079150.2-201ENST00000443733 78 ntBASIC0.71□□□□□ -2.3
SOX1O00570 SNORA75.1-201ENST00000391130 148 ntBASIC0.7□□□□□ -2.3
SOX1O00570 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
SOX1O00570 MIR5589-201ENST00000579442 60 ntBASIC0.7□□□□□ -2.3
SOX1O00570 MIR3938-201ENST00000582157 103 ntBASIC0.7□□□□□ -2.3
SOX1O00570 MIR5087-201ENST00000635826 76 ntBASIC0.7□□□□□ -2.3
SOX1O00570 RNU6-1079P-201ENST00000362861 110 ntBASIC0.69□□□□□ -2.3
SOX1O00570 MIR1255B2-201ENST00000408618 67 ntBASIC0.69□□□□□ -2.3
SOX1O00570 SNORA62.5-201ENST00000516634 120 ntBASIC0.69□□□□□ -2.3
SOX1O00570 MIR6773-201ENST00000612812 74 ntBASIC0.69□□□□□ -2.3
SOX1O00570 MIR499B-201ENST00000636498 73 ntBASIC0.69□□□□□ -2.3
SOX1O00570 MIR329-2-201ENST00000385029 84 ntBASIC0.68□□□□□ -2.3
SOX1O00570 SNORA49-201ENST00000386157 136 ntBASIC0.68□□□□□ -2.3
SOX1O00570 RNU6-337P-201ENST00000391243 106 ntBASIC0.68□□□□□ -2.3
SOX1O00570 snoU13.19-201ENST00000459148 104 ntBASIC0.68□□□□□ -2.3
SOX1O00570 RNU6-518P-201ENST00000516056 96 ntBASIC0.68□□□□□ -2.3
SOX1O00570 MIR3925-201ENST00000584674 77 ntBASIC0.68□□□□□ -2.3
SOX1O00570 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
SOX1O00570 RNU6-1036P-201ENST00000383959 104 ntBASIC0.67□□□□□ -2.3
SOX1O00570 MIR876-201ENST00000401147 81 ntBASIC0.67□□□□□ -2.3
SOX1O00570 Y_RNA.325-201ENST00000365171 122 ntBASIC0.66□□□□□ -2.3
SOX1O00570 MIR519A2-201ENST00000384990 87 ntBASIC0.66□□□□□ -2.3
SOX1O00570 RN7SL660P-201ENST00000614852 299 ntBASIC0.66□□□□□ -2.3
SOX1O00570 Y_RNA.74-201ENST00000362911 99 ntBASIC0.65□□□□□ -2.31
SOX1O00570 RNU6-829P-201ENST00000363700 112 ntBASIC0.65□□□□□ -2.31
SOX1O00570 RNU7-129P-201ENST00000516128 62 ntBASIC0.65□□□□□ -2.31
SOX1O00570 RNA5SP470-201ENST00000516463 106 ntBASIC0.65□□□□□ -2.31
SOX1O00570 SNORA9.1-201ENST00000362412 131 ntBASIC0.64□□□□□ -2.31
SOX1O00570 RNU6-614P-201ENST00000384369 107 ntBASIC0.64□□□□□ -2.31
SOX1O00570 RNU6-987P-201ENST00000384759 104 ntBASIC0.64□□□□□ -2.31
SOX1O00570 RNU4-37P-201ENST00000410214 84 ntBASIC0.64□□□□□ -2.31
SOX1O00570 AC023932.2-201ENST00000603176 175 ntBASIC0.64□□□□□ -2.31
SOX1O00570 U6.59-201ENST00000615686 107 ntBASIC0.64□□□□□ -2.31
SOX1O00570 RNU6-502P-201ENST00000362419 108 ntBASIC0.63□□□□□ -2.31
SOX1O00570 SCARNA11.2-201ENST00000517183 154 ntBASIC0.63□□□□□ -2.31
SOX1O00570 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.63□□□□□ -2.31
SOX1O00570 SNORD115-25-201ENST00000362619 82 ntBASIC0.62□□□□□ -2.31
SOX1O00570 RNA5SP25-201ENST00000410815 110 ntBASIC0.62□□□□□ -2.31
SOX1O00570 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
SOX1O00570 MIR103A1-201ENST00000362165 78 ntBASIC0.61□□□□□ -2.31
SOX1O00570 RNU6-30P-201ENST00000384561 107 ntBASIC0.61□□□□□ -2.31
SOX1O00570 MIR106A-201ENST00000384870 81 ntBASIC0.61□□□□□ -2.31
SOX1O00570 MIRLET7B-201ENST00000385140 83 ntBASIC0.61□□□□□ -2.31
SOX1O00570 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.61□□□□□ -2.31
SOX1O00570 SNORA68.3-201ENST00000515906 83 ntBASIC0.61□□□□□ -2.31
SOX1O00570 RNU7-154P-201ENST00000516194 62 ntBASIC0.61□□□□□ -2.31
SOX1O00570 MIRLET7D-201ENST00000362263 87 ntBASIC0.59□□□□□ -2.31
SOX1O00570 SNORA41B-201ENST00000384785 128 ntBASIC0.59□□□□□ -2.31
SOX1O00570 RNU6-1246P-201ENST00000391064 107 ntBASIC0.59□□□□□ -2.31
SOX1O00570 RNU6-782P-201ENST00000516852 104 ntBASIC0.59□□□□□ -2.31
SOX1O00570 RNU6-446P-201ENST00000362827 106 ntBASIC0.58□□□□□ -2.32
SOX1O00570 Y_RNA.236-201ENST00000364427 111 ntBASIC0.58□□□□□ -2.32
SOX1O00570 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
SOX1O00570 MIR527-201ENST00000385244 85 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms