Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 MIR150-201ENST00000385048 84 ntBASIC1.35□□□□□ -2.19
H3BM21 MIR5706-201ENST00000579841 80 ntBASIC1.35□□□□□ -2.19
H3BM21 RNU1-29P-201ENST00000606574 126 ntBASIC1.35□□□□□ -2.19
H3BM21 MIR26B-201ENST00000362251 77 ntBASIC1.34□□□□□ -2.19
H3BM21 MIR4432-201ENST00000581823 84 ntBASIC1.34□□□□□ -2.19
H3BM21 MIR7974-201ENST00000615835 79 ntBASIC1.34□□□□□ -2.19
H3BM21 SNORD124-201ENST00000459577 104 ntBASIC1.33□□□□□ -2.2
H3BM21 RNU6-175P-201ENST00000516896 107 ntBASIC1.33□□□□□ -2.2
H3BM21 AC108676.2-201ENST00000605225 163 ntBASIC1.33□□□□□ -2.2
H3BM21 SNORD57-201ENST00000448188 72 ntBASIC1.32□□□□□ -2.2
H3BM21 AC011195.1-201ENST00000578177 177 ntBASIC1.32□□□□□ -2.2
H3BM21 RNU4-45P-201ENST00000365469 141 ntBASIC1.31□□□□□ -2.2
H3BM21 RNU6-1036P-201ENST00000383959 104 ntBASIC1.31□□□□□ -2.2
H3BM21 MIR19B1-201ENST00000384829 87 ntBASIC1.31□□□□□ -2.2
H3BM21 MIR200A-201ENST00000384875 90 ntBASIC1.31□□□□□ -2.2
H3BM21 SNORD63.2-201ENST00000516303 64 ntBASIC1.31□□□□□ -2.2
H3BM21 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
H3BM21 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
H3BM21 RNU6-530P-201ENST00000391180 107 ntBASIC1.3□□□□□ -2.2
H3BM21 RNU7-88P-201ENST00000458752 63 ntBASIC1.3□□□□□ -2.2
H3BM21 U7.5-201ENST00000517224 61 ntBASIC1.3□□□□□ -2.2
H3BM21 MTRNR2L9-201ENST00000622562 75 ntBASIC1.3□□□□□ -2.2
H3BM21 SNORD99-201ENST00000408612 74 ntBASIC1.29□□□□□ -2.2
H3BM21 Y_RNA.698-201ENST00000516798 118 ntBASIC1.29□□□□□ -2.2
H3BM21 RNU6-1223P-201ENST00000517124 104 ntBASIC1.29□□□□□ -2.2
H3BM21 AC022709.1-201ENST00000615967 87 ntBASIC1.29□□□□□ -2.2
H3BM21 MIR96-201ENST00000362288 78 ntBASIC1.28□□□□□ -2.2
H3BM21 SNORD114-26-201ENST00000363543 72 ntBASIC1.28□□□□□ -2.2
H3BM21 MIR3660-201ENST00000584845 100 ntBASIC1.28□□□□□ -2.2
H3BM21 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.28□□□□□ -2.21
H3BM21 SNORD115-23-201ENST00000364461 82 ntBASIC1.27□□□□□ -2.21
H3BM21 RNU6-1326P-201ENST00000391262 107 ntBASIC1.27□□□□□ -2.21
H3BM21 AC069271.1-201ENST00000445577 156 ntBASIC1.27□□□□□ -2.21
H3BM21 SNORD63.1-201ENST00000516178 80 ntBASIC1.27□□□□□ -2.21
H3BM21 MIR6779-201ENST00000617283 64 ntBASIC1.27□□□□□ -2.21
H3BM21 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
H3BM21 RNA5SP325-201ENST00000363756 130 ntBASIC1.26□□□□□ -2.21
H3BM21 RNU6-1174P-201ENST00000517278 101 ntBASIC1.26□□□□□ -2.21
H3BM21 U7.6-201ENST00000610841 64 ntBASIC1.26□□□□□ -2.21
H3BM21 Y_RNA.206-201ENST00000364136 102 ntBASIC1.25□□□□□ -2.21
H3BM21 Y_RNA.345-201ENST00000365384 92 ntBASIC1.25□□□□□ -2.21
H3BM21 RNA5SP255-201ENST00000516370 107 ntBASIC1.25□□□□□ -2.21
H3BM21 MIR6515-201ENST00000619843 57 ntBASIC1.25□□□□□ -2.21
H3BM21 RNU1-93P-201ENST00000364704 169 ntBASIC1.24□□□□□ -2.21
H3BM21 RNU6-939P-201ENST00000384634 107 ntBASIC1.24□□□□□ -2.21
H3BM21 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.24□□□□□ -2.21
H3BM21 AC068338.1-201ENST00000565567 176 ntBASIC1.24□□□□□ -2.21
H3BM21 PVT1_3.1-201ENST00000620853 95 ntBASIC1.24□□□□□ -2.21
H3BM21 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
H3BM21 Y_RNA.321-201ENST00000365149 102 ntBASIC1.23□□□□□ -2.21
H3BM21 MIR3170-201ENST00000582699 77 ntBASIC1.23□□□□□ -2.21
H3BM21 SNORD114-24-201ENST00000365029 72 ntBASIC1.22□□□□□ -2.21
H3BM21 SNORA2A-201ENST00000383885 135 ntBASIC1.22□□□□□ -2.21
H3BM21 RNA5SP222-201ENST00000411039 105 ntBASIC1.22□□□□□ -2.21
H3BM21 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.22□□□□□ -2.21
H3BM21 RNA5SP404-201ENST00000517118 132 ntBASIC1.22□□□□□ -2.21
H3BM21 MIR520E-201ENST00000384867 87 ntBASIC1.21□□□□□ -2.22
H3BM21 RNU6-229P-201ENST00000516614 102 ntBASIC1.21□□□□□ -2.22
H3BM21 MIR4677-201ENST00000584153 80 ntBASIC1.21□□□□□ -2.22
H3BM21 snoR1.1-201ENST00000628177 80 ntBASIC1.21□□□□□ -2.22
H3BM21 MIR4317-201ENST00000637586 65 ntBASIC1.21□□□□□ -2.22
H3BM21 RNA5SP517-201ENST00000364724 117 ntBASIC1.2□□□□□ -2.22
H3BM21 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.2□□□□□ -2.22
H3BM21 RNU6-1232P-201ENST00000516299 86 ntBASIC1.2□□□□□ -2.22
H3BM21 AP000676.1-201ENST00000533307 52 ntBASIC1.2□□□□□ -2.22
H3BM21 AC084368.1-201ENST00000620935 65 ntBASIC1.2□□□□□ -2.22
H3BM21 MIR6888-201ENST00000621977 67 ntBASIC1.2□□□□□ -2.22
H3BM21 RNU6-133P-201ENST00000383989 107 ntBASIC1.19□□□□□ -2.22
H3BM21 MIR618-201ENST00000385287 98 ntBASIC1.19□□□□□ -2.22
H3BM21 RPS29P1-201ENST00000465274 159 ntBASIC1.19□□□□□ -2.22
H3BM21 SNORA25.18-201ENST00000607153 114 ntBASIC1.19□□□□□ -2.22
H3BM21 MIR6507-201ENST00000613630 70 ntBASIC1.19□□□□□ -2.22
H3BM21 RN7SL660P-201ENST00000614852 299 ntBASIC1.19□□□□□ -2.22
H3BM21 SNORD114-27-201ENST00000363766 70 ntBASIC1.18□□□□□ -2.22
H3BM21 RNU6-1111P-201ENST00000391118 107 ntBASIC1.18□□□□□ -2.22
H3BM21 MIR4464-201ENST00000580818 92 ntBASIC1.18□□□□□ -2.22
H3BM21 RNU1-124P-201ENST00000363861 145 ntBASIC1.17□□□□□ -2.22
H3BM21 RNU6-1047P-201ENST00000364418 107 ntBASIC1.17□□□□□ -2.22
H3BM21 MIR598-201ENST00000384868 97 ntBASIC1.17□□□□□ -2.22
H3BM21 MIR501-201ENST00000390204 84 ntBASIC1.17□□□□□ -2.22
H3BM21 SNORD111B-201ENST00000408587 80 ntBASIC1.17□□□□□ -2.22
H3BM21 AC087343.1-201ENST00000477341 475 ntBASIC1.17□□□□□ -2.22
H3BM21 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.17□□□□□ -2.22
H3BM21 Y_RNA.423-201ENST00000384057 113 ntBASIC1.16□□□□□ -2.22
H3BM21 MIR151B-201ENST00000584249 96 ntBASIC1.16□□□□□ -2.22
H3BM21 MIR4295-201ENST00000585286 85 ntBASIC1.16□□□□□ -2.22
H3BM21 AL445584.3-201ENST00000617173 78 ntBASIC1.16□□□□□ -2.22
H3BM21 MIR6788-201ENST00000618842 66 ntBASIC1.16□□□□□ -2.22
H3BM21 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.14□□□□□ -2.23
H3BM21 MIR1468-201ENST00000410600 86 ntBASIC1.14□□□□□ -2.23
H3BM21 OR2A41P-201ENST00000473586 105 ntBASIC1.14□□□□□ -2.23
H3BM21 ACA64.5-201ENST00000516207 127 ntBASIC1.14□□□□□ -2.23
H3BM21 AC104408.1-201ENST00000605241 170 ntBASIC1.14□□□□□ -2.23
H3BM21 MIR6767-201ENST00000637302 66 ntBASIC1.14□□□□□ -2.23
H3BM21 MIR4426-201ENST00000640330 63 ntBASIC1.14□□□□□ -2.23
H3BM21 SNORA36.2-201ENST00000384004 127 ntBASIC1.13□□□□□ -2.23
H3BM21 MIR548J-201ENST00000408833 112 ntBASIC1.13□□□□□ -2.23
H3BM21 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
H3BM21 RNU6-485P-201ENST00000363475 107 ntBASIC1.12□□□□□ -2.23
H3BM21 RNU6-258P-201ENST00000390884 101 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms