Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 MIR5706-201ENST00000579841 80 ntBASIC0.8□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 MIR6773-201ENST00000612812 74 ntBASIC0.8□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 AC022709.1-201ENST00000615967 87 ntBASIC0.8□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 MIR6515-201ENST00000619843 57 ntBASIC0.8□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 SNORD115-25-201ENST00000362619 82 ntBASIC0.79□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 SNORD1B-201ENST00000363091 84 ntBASIC0.79□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 SNORD114-29-201ENST00000364819 70 ntBASIC0.79□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 RNU6-246P-201ENST00000384702 107 ntBASIC0.79□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 RNU6-229P-201ENST00000516614 102 ntBASIC0.79□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 MIR5000-201ENST00000577717 103 ntBASIC0.79□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 AL353765.1-201ENST00000605514 183 ntBASIC0.79□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 SNORD114-26-201ENST00000363543 72 ntBASIC0.78□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 Y_RNA.540-201ENST00000384638 111 ntBASIC0.78□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 SNORA2A-201ENST00000383885 135 ntBASIC0.77□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 RNU6-1036P-201ENST00000383959 104 ntBASIC0.77□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 MIR579-201ENST00000385221 98 ntBASIC0.77□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 MIR140-201ENST00000385282 100 ntBASIC0.77□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 SNORA40B-201ENST00000385573 128 ntBASIC0.77□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 SNORA49-201ENST00000386157 136 ntBASIC0.77□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 Y_RNA.374-201ENST00000365606 101 ntBASIC0.76□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 RNU6-930P-201ENST00000390938 100 ntBASIC0.76□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 RNU4-54P-201ENST00000516428 129 ntBASIC0.76□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 RNU6-782P-201ENST00000516852 104 ntBASIC0.76□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 MIR6835-201ENST00000621552 64 ntBASIC0.76□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 RNU6-458P-201ENST00000384179 107 ntBASIC0.75□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.75□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 RNU6-175P-201ENST00000516896 107 ntBASIC0.75□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 U6.58-201ENST00000613107 107 ntBASIC0.75□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.75□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.74□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 MIR548X-201ENST00000580069 75 ntBASIC0.74□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 MIR4490-201ENST00000582647 84 ntBASIC0.74□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 AC084368.1-201ENST00000620935 65 ntBASIC0.74□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 MIR598-201ENST00000384868 97 ntBASIC0.73□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 MIRLET7B-201ENST00000385140 83 ntBASIC0.73□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 SNORD2-201ENST00000459163 69 ntBASIC0.73□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 PSMC1P5-201ENST00000512850 177 ntBASIC0.73□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 RNU7-154P-201ENST00000516194 62 ntBASIC0.73□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 MIR4714-201ENST00000580728 77 ntBASIC0.73□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 AL590095.2-201ENST00000604136 117 ntBASIC0.73□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 PVT1_3.1-201ENST00000620853 95 ntBASIC0.73□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 MIR429-201ENST00000362106 83 ntBASIC0.72□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 SNORD118-201ENST00000363593 134 ntBASIC0.72□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 MIR508-201ENST00000384857 115 ntBASIC0.72□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 SNORA40.8-201ENST00000411034 126 ntBASIC0.72□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 RNU7-129P-201ENST00000516128 62 ntBASIC0.72□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 MIR4677-201ENST00000584153 80 ntBASIC0.72□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 U7.6-201ENST00000610841 64 ntBASIC0.72□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 U2.18-201ENST00000622185 84 ntBASIC0.72□□□□□ -2.29
C1QTNF3-AMACRE9PGA6 RNU6-502P-201ENST00000362419 108 ntBASIC0.71□□□□□ -2.3
C1QTNF3-AMACRE9PGA6 MIR608-201ENST00000384820 100 ntBASIC0.71□□□□□ -2.3
C1QTNF3-AMACRE9PGA6 MIR501-201ENST00000390204 84 ntBASIC0.71□□□□□ -2.3
C1QTNF3-AMACRE9PGA6 MIR760-201ENST00000390220 80 ntBASIC0.71□□□□□ -2.3
C1QTNF3-AMACRE9PGA6 SNORD71-201ENST00000411292 86 ntBASIC0.71□□□□□ -2.3
C1QTNF3-AMACRE9PGA6 RNA5SP470-201ENST00000516463 106 ntBASIC0.71□□□□□ -2.3
C1QTNF3-AMACRE9PGA6 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
C1QTNF3-AMACRE9PGA6 Y_RNA.30-201ENST00000362572 97 ntBASIC0.7□□□□□ -2.3
C1QTNF3-AMACRE9PGA6 AP000676.1-201ENST00000533307 52 ntBASIC0.7□□□□□ -2.3
C1QTNF3-AMACRE9PGA6 AL353803.5-201ENST00000599815 141 ntBASIC0.7□□□□□ -2.3
C1QTNF3-AMACRE9PGA6 RN7SL660P-201ENST00000614852 299 ntBASIC0.7□□□□□ -2.3
C1QTNF3-AMACRE9PGA6 MIR6755-201ENST00000619993 66 ntBASIC0.7□□□□□ -2.3
C1QTNF3-AMACRE9PGA6 RNU6-598P-201ENST00000364017 105 ntBASIC0.69□□□□□ -2.3
C1QTNF3-AMACRE9PGA6 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.69□□□□□ -2.3
C1QTNF3-AMACRE9PGA6 MIR499B-201ENST00000636498 73 ntBASIC0.69□□□□□ -2.3
C1QTNF3-AMACRE9PGA6 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.68□□□□□ -2.3
C1QTNF3-AMACRE9PGA6 RNU7-151P-201ENST00000516930 53 ntBASIC0.68□□□□□ -2.3
C1QTNF3-AMACRE9PGA6 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.68□□□□□ -2.3
C1QTNF3-AMACRE9PGA6 MIR518A1-201ENST00000385068 85 ntBASIC0.67□□□□□ -2.3
C1QTNF3-AMACRE9PGA6 MIR545-201ENST00000385085 106 ntBASIC0.67□□□□□ -2.3
C1QTNF3-AMACRE9PGA6 MIR4432-201ENST00000581823 84 ntBASIC0.67□□□□□ -2.3
C1QTNF3-AMACRE9PGA6 Y_RNA.178-201ENST00000363832 102 ntBASIC0.66□□□□□ -2.3
C1QTNF3-AMACRE9PGA6 MIR548F3-201ENST00000408509 87 ntBASIC0.66□□□□□ -2.3
C1QTNF3-AMACRE9PGA6 RNU6-924P-201ENST00000362926 108 ntBASIC0.65□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 RNU7-88P-201ENST00000458752 63 ntBASIC0.65□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 MIR3925-201ENST00000584674 77 ntBASIC0.65□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 uc_338.36-201ENST00000622331 158 ntBASIC0.65□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 snoR1.1-201ENST00000628177 80 ntBASIC0.65□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 RNA5SP436-201ENST00000516020 115 ntBASIC0.64□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 RNU6-419P-201ENST00000517030 63 ntBASIC0.64□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 AC108676.2-201ENST00000605225 163 ntBASIC0.64□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 Y_RNA.69-201ENST00000362885 109 ntBASIC0.63□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 RNA5SP128-201ENST00000365305 116 ntBASIC0.63□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 MIR6513-201ENST00000621188 64 ntBASIC0.63□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 RNA5SP347-201ENST00000362445 119 ntBASIC0.62□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 RNU6-838P-201ENST00000363399 108 ntBASIC0.62□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 MIR216A-201ENST00000385063 110 ntBASIC0.62□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 SCARNA11.2-201ENST00000517183 154 ntBASIC0.62□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 RNU6-110P-201ENST00000384508 104 ntBASIC0.61□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 MIR329-2-201ENST00000385029 84 ntBASIC0.61□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 RNU6-995P-201ENST00000391244 107 ntBASIC0.61□□□□□ -2.31
C1QTNF3-AMACRE9PGA6 AC098934.3-201ENST00000430450 190 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms