Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Crlf3Q9Z2L7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.19■□□□□ 0.18
Crlf3Q9Z2L7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Crlf3Q9Z2L7 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.19■□□□□ 0.18
Crlf3Q9Z2L7 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.19■□□□□ 0.18
Crlf3Q9Z2L7 Gm7791-201ENSMUST00000219066 539 ntBASIC16.19■□□□□ 0.18
Crlf3Q9Z2L7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.19■□□□□ 0.18
Crlf3Q9Z2L7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Crlf3Q9Z2L7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Crlf3Q9Z2L7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.19■□□□□ 0.18
Crlf3Q9Z2L7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Crlf3Q9Z2L7 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Crlf3Q9Z2L7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Crlf3Q9Z2L7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Crlf3Q9Z2L7 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Crlf3Q9Z2L7 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Gm21814-202ENSMUST00000203277 873 ntBASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Crlf3Q9Z2L7 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Crlf3Q9Z2L7 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crlf3Q9Z2L7 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crlf3Q9Z2L7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crlf3Q9Z2L7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.16■□□□□ 0.18
Crlf3Q9Z2L7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crlf3Q9Z2L7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Crlf3Q9Z2L7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.16■□□□□ 0.18
Crlf3Q9Z2L7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Crlf3Q9Z2L7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crlf3Q9Z2L7 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.16■□□□□ 0.18
Crlf3Q9Z2L7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.16■□□□□ 0.18
Crlf3Q9Z2L7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Crlf3Q9Z2L7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Crlf3Q9Z2L7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Crlf3Q9Z2L7 Timm23-208ENSMUST00000226683 750 ntBASIC16.16■□□□□ 0.18
Crlf3Q9Z2L7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crlf3Q9Z2L7 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crlf3Q9Z2L7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Crlf3Q9Z2L7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Crlf3Q9Z2L7 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crlf3Q9Z2L7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Crlf3Q9Z2L7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Crlf3Q9Z2L7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms