Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.51■□□□□ 0.23
Smarcb1Q9Z0H3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcb1Q9Z0H3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcb1Q9Z0H3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.51■□□□□ 0.23
Smarcb1Q9Z0H3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcb1Q9Z0H3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcb1Q9Z0H3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Smarcb1Q9Z0H3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcb1Q9Z0H3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Smarcb1Q9Z0H3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcb1Q9Z0H3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcb1Q9Z0H3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Smarcb1Q9Z0H3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcb1Q9Z0H3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcb1Q9Z0H3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcb1Q9Z0H3 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.49■□□□□ 0.23
Smarcb1Q9Z0H3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Smarcb1Q9Z0H3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcb1Q9Z0H3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.49■□□□□ 0.23
Smarcb1Q9Z0H3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcb1Q9Z0H3 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.49■□□□□ 0.23
Smarcb1Q9Z0H3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.49■□□□□ 0.23
Smarcb1Q9Z0H3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcb1Q9Z0H3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.49■□□□□ 0.23
Smarcb1Q9Z0H3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Smarcb1Q9Z0H3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcb1Q9Z0H3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcb1Q9Z0H3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Smarcb1Q9Z0H3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcb1Q9Z0H3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcb1Q9Z0H3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.49■□□□□ 0.23
Smarcb1Q9Z0H3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcb1Q9Z0H3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcb1Q9Z0H3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcb1Q9Z0H3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Gm27628-201ENSMUST00000184911 107 ntBASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
Smarcb1Q9Z0H3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Gm14140-201ENSMUST00000119999 995 ntBASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms