Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ClcnkaQ9WUB7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ClcnkaQ9WUB7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ClcnkaQ9WUB7 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ClcnkaQ9WUB7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
ClcnkaQ9WUB7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ClcnkaQ9WUB7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
ClcnkaQ9WUB7 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Gm44430-201ENSMUST00000203376 995 ntBASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClcnkaQ9WUB7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ClcnkaQ9WUB7 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
ClcnkaQ9WUB7 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ClcnkaQ9WUB7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
ClcnkaQ9WUB7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ClcnkaQ9WUB7 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ClcnkaQ9WUB7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
ClcnkaQ9WUB7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ClcnkaQ9WUB7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ClcnkaQ9WUB7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
ClcnkaQ9WUB7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
ClcnkaQ9WUB7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ClcnkaQ9WUB7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ClcnkaQ9WUB7 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ClcnkaQ9WUB7 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ClcnkaQ9WUB7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.7□□□□□ -0.06
ClcnkaQ9WUB7 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ClcnkaQ9WUB7 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ClcnkaQ9WUB7 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.7□□□□□ -0.06
ClcnkaQ9WUB7 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ClcnkaQ9WUB7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ClcnkaQ9WUB7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ClcnkaQ9WUB7 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.7□□□□□ -0.06
ClcnkaQ9WUB7 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms