Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Gm14701-201ENSMUST00000117156 348 ntBASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Gm27321-201ENSMUST00000185021 205 ntBASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col13a1Q9R1N9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Gm43438-201ENSMUST00000198133 379 ntBASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Gm44430-201ENSMUST00000203376 995 ntBASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Chchd1-203ENSMUST00000224633 557 ntBASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col13a1Q9R1N9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Mir3113-201ENSMUST00000175478 76 ntBASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Col13a1Q9R1N9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms