Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tubd1Q9R1K7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tubd1Q9R1K7 Gm18622-201ENSMUST00000219361 595 ntBASIC16.2■□□□□ 0.18
Tubd1Q9R1K7 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tubd1Q9R1K7 Birc2-201ENSMUST00000054878 378 ntBASIC16.2■□□□□ 0.18
Tubd1Q9R1K7 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Tubd1Q9R1K7 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tubd1Q9R1K7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tubd1Q9R1K7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tubd1Q9R1K7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tubd1Q9R1K7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tubd1Q9R1K7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 Gm8655-201ENSMUST00000221159 852 ntBASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 Gm10819-201ENSMUST00000099988 561 ntBASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tubd1Q9R1K7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.17■□□□□ 0.18
Tubd1Q9R1K7 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms