Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdh17Q9R100 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Cdh17Q9R100 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Cdh17Q9R100 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.09
Cdh17Q9R100 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Cdh17Q9R100 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh17Q9R100 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.58■□□□□ 0.08
Cdh17Q9R100 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh17Q9R100 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh17Q9R100 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh17Q9R100 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.58■□□□□ 0.08
Cdh17Q9R100 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.58■□□□□ 0.08
Cdh17Q9R100 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.58■□□□□ 0.08
Cdh17Q9R100 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Cdh17Q9R100 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh17Q9R100 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh17Q9R100 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Cdh17Q9R100 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.58■□□□□ 0.08
Cdh17Q9R100 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Cdh17Q9R100 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh17Q9R100 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh17Q9R100 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh17Q9R100 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh17Q9R100 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh17Q9R100 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Cdh17Q9R100 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh17Q9R100 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh17Q9R100 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh17Q9R100 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh17Q9R100 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh17Q9R100 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh17Q9R100 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh17Q9R100 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh17Q9R100 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Cdh17Q9R100 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.57■□□□□ 0.08
Cdh17Q9R100 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.57■□□□□ 0.08
Cdh17Q9R100 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Cdh17Q9R100 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh17Q9R100 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh17Q9R100 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.57■□□□□ 0.08
Cdh17Q9R100 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Cdh17Q9R100 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh17Q9R100 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh17Q9R100 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Cdh17Q9R100 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh17Q9R100 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh17Q9R100 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh17Q9R100 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh17Q9R100 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.56■□□□□ 0.08
Cdh17Q9R100 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh17Q9R100 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh17Q9R100 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh17Q9R100 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh17Q9R100 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh17Q9R100 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh17Q9R100 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh17Q9R100 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh17Q9R100 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh17Q9R100 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh17Q9R100 Gm10252-201ENSMUST00000209541 832 ntBASIC15.56■□□□□ 0.08
Cdh17Q9R100 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh17Q9R100 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cdh17Q9R100 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh17Q9R100 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh17Q9R100 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh17Q9R100 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh17Q9R100 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh17Q9R100 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh17Q9R100 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh17Q9R100 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh17Q9R100 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh17Q9R100 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh17Q9R100 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cdh17Q9R100 Mir770-201ENSMUST00000103252 94 ntBASIC15.55■□□□□ 0.08
Cdh17Q9R100 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.55■□□□□ 0.08
Cdh17Q9R100 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh17Q9R100 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh17Q9R100 Mir6982-201ENSMUST00000184354 68 ntBASIC15.55■□□□□ 0.08
Cdh17Q9R100 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.55■□□□□ 0.08
Cdh17Q9R100 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh17Q9R100 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.55■□□□□ 0.08
Cdh17Q9R100 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh17Q9R100 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh17Q9R100 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh17Q9R100 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh17Q9R100 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh17Q9R100 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh17Q9R100 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh17Q9R100 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh17Q9R100 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh17Q9R100 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh17Q9R100 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Cdh17Q9R100 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cdh17Q9R100 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh17Q9R100 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh17Q9R100 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh17Q9R100 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh17Q9R100 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms