Protein–RNA interactions for Protein: Q9R078

Prkab1, 5'-AMP-activated protein kinase subunit beta-1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prkab1Q9R078 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prkab1Q9R078 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prkab1Q9R078 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.21■□□□□ 0.51
Prkab1Q9R078 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prkab1Q9R078 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Prkab1Q9R078 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prkab1Q9R078 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prkab1Q9R078 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prkab1Q9R078 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prkab1Q9R078 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prkab1Q9R078 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Prkab1Q9R078 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prkab1Q9R078 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.2■□□□□ 0.5
Prkab1Q9R078 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Prkab1Q9R078 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Prkab1Q9R078 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Prkab1Q9R078 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.2■□□□□ 0.5
Prkab1Q9R078 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.2■□□□□ 0.5
Prkab1Q9R078 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prkab1Q9R078 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.2■□□□□ 0.5
Prkab1Q9R078 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.2■□□□□ 0.5
Prkab1Q9R078 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.2■□□□□ 0.5
Prkab1Q9R078 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prkab1Q9R078 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.2■□□□□ 0.5
Prkab1Q9R078 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.2■□□□□ 0.5
Prkab1Q9R078 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prkab1Q9R078 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prkab1Q9R078 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Prkab1Q9R078 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prkab1Q9R078 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prkab1Q9R078 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prkab1Q9R078 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prkab1Q9R078 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Prkab1Q9R078 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
Prkab1Q9R078 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Prkab1Q9R078 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prkab1Q9R078 Grk6-207ENSMUST00000225925 2769 ntBASIC18.19■□□□□ 0.5
Prkab1Q9R078 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prkab1Q9R078 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prkab1Q9R078 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prkab1Q9R078 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prkab1Q9R078 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Prkab1Q9R078 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prkab1Q9R078 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.19■□□□□ 0.5
Prkab1Q9R078 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prkab1Q9R078 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prkab1Q9R078 Gm8344-201ENSMUST00000119813 856 ntBASIC18.19■□□□□ 0.5
Prkab1Q9R078 Gm11764-201ENSMUST00000120221 623 ntBASIC18.19■□□□□ 0.5
Prkab1Q9R078 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prkab1Q9R078 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prkab1Q9R078 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.19■□□□□ 0.5
Prkab1Q9R078 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.19■□□□□ 0.5
Prkab1Q9R078 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prkab1Q9R078 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prkab1Q9R078 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prkab1Q9R078 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prkab1Q9R078 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Prkab1Q9R078 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Prkab1Q9R078 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prkab1Q9R078 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prkab1Q9R078 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Prkab1Q9R078 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prkab1Q9R078 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prkab1Q9R078 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.19■□□□□ 0.5
Prkab1Q9R078 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prkab1Q9R078 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prkab1Q9R078 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prkab1Q9R078 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prkab1Q9R078 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prkab1Q9R078 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prkab1Q9R078 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prkab1Q9R078 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.18■□□□□ 0.5
Prkab1Q9R078 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.18■□□□□ 0.5
Prkab1Q9R078 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms