Protein–RNA interactions for Protein: Q9QYB1

Clic4, Chloride intracellular channel protein 4, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clic4Q9QYB1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clic4Q9QYB1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clic4Q9QYB1 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clic4Q9QYB1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clic4Q9QYB1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Clic4Q9QYB1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clic4Q9QYB1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clic4Q9QYB1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
Clic4Q9QYB1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clic4Q9QYB1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clic4Q9QYB1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clic4Q9QYB1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clic4Q9QYB1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Clic4Q9QYB1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Clic4Q9QYB1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clic4Q9QYB1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clic4Q9QYB1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clic4Q9QYB1 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Gm11950-201ENSMUST00000121615 838 ntBASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Gm29518-201ENSMUST00000190858 372 ntBASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Gm17808-201ENSMUST00000200859 894 ntBASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clic4Q9QYB1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clic4Q9QYB1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clic4Q9QYB1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.15■□□□□ 0.5
Clic4Q9QYB1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Clic4Q9QYB1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Clic4Q9QYB1 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Clic4Q9QYB1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clic4Q9QYB1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Clic4Q9QYB1 Gm23634-201ENSMUST00000175071 91 ntBASIC18.15■□□□□ 0.5
Clic4Q9QYB1 Mir7071-201ENSMUST00000184847 69 ntBASIC18.15■□□□□ 0.5
Clic4Q9QYB1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Clic4Q9QYB1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Clic4Q9QYB1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clic4Q9QYB1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Clic4Q9QYB1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clic4Q9QYB1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clic4Q9QYB1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clic4Q9QYB1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clic4Q9QYB1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clic4Q9QYB1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clic4Q9QYB1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Clic4Q9QYB1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Clic4Q9QYB1 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Clic4Q9QYB1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clic4Q9QYB1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clic4Q9QYB1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clic4Q9QYB1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clic4Q9QYB1 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clic4Q9QYB1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clic4Q9QYB1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.14■□□□□ 0.49
Clic4Q9QYB1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Clic4Q9QYB1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
Clic4Q9QYB1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clic4Q9QYB1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clic4Q9QYB1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clic4Q9QYB1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Clic4Q9QYB1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clic4Q9QYB1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clic4Q9QYB1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clic4Q9QYB1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clic4Q9QYB1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clic4Q9QYB1 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Clic4Q9QYB1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clic4Q9QYB1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.13■□□□□ 0.49
Clic4Q9QYB1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Clic4Q9QYB1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clic4Q9QYB1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clic4Q9QYB1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.13■□□□□ 0.49
Clic4Q9QYB1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Clic4Q9QYB1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clic4Q9QYB1 Gm15794-201ENSMUST00000120182 631 ntBASIC18.13■□□□□ 0.49
Clic4Q9QYB1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.13■□□□□ 0.49
Clic4Q9QYB1 Gm6659-201ENSMUST00000174752 547 ntBASIC18.13■□□□□ 0.49
Clic4Q9QYB1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.13■□□□□ 0.49
Clic4Q9QYB1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clic4Q9QYB1 Mir6404-201ENSMUST00000183699 94 ntBASIC18.13■□□□□ 0.49
Clic4Q9QYB1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clic4Q9QYB1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms