Protein–RNA interactions for Protein: Q9JKF7

Mrpl39, 39S ribosomal protein L39, mitochondrial, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl39Q9JKF7 Gm7638-201ENSMUST00000121348 967 ntBASIC13.84□□□□□ -0.19
Mrpl39Q9JKF7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.84□□□□□ -0.19
Mrpl39Q9JKF7 Gm27275-201ENSMUST00000184318 272 ntBASIC13.84□□□□□ -0.19
Mrpl39Q9JKF7 Gm18666-201ENSMUST00000190039 958 ntBASIC13.84□□□□□ -0.19
Mrpl39Q9JKF7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.84□□□□□ -0.19
Mrpl39Q9JKF7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Mrpl39Q9JKF7 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Mrpl39Q9JKF7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.84□□□□□ -0.19
Mrpl39Q9JKF7 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mrpl39Q9JKF7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mrpl39Q9JKF7 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Mrpl39Q9JKF7 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mrpl39Q9JKF7 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Mrpl39Q9JKF7 Phf7-203ENSMUST00000226565 1971 ntBASIC13.83□□□□□ -0.19
Mrpl39Q9JKF7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Mrpl39Q9JKF7 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Mrpl39Q9JKF7 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mrpl39Q9JKF7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mrpl39Q9JKF7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Mrpl39Q9JKF7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Mrpl39Q9JKF7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mrpl39Q9JKF7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Mrpl39Q9JKF7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.83□□□□□ -0.2
Mrpl39Q9JKF7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Mrpl39Q9JKF7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Mrpl39Q9JKF7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Mrpl39Q9JKF7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Mrpl39Q9JKF7 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mrpl39Q9JKF7 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.83□□□□□ -0.2
Mrpl39Q9JKF7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Mrpl39Q9JKF7 Actl10-202ENSMUST00000226583 1501 ntBASIC13.83□□□□□ -0.2
Mrpl39Q9JKF7 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Mrpl39Q9JKF7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mrpl39Q9JKF7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.83□□□□□ -0.2
Mrpl39Q9JKF7 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mrpl39Q9JKF7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Mrpl39Q9JKF7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mrpl39Q9JKF7 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mrpl39Q9JKF7 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mrpl39Q9JKF7 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl39Q9JKF7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl39Q9JKF7 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.81□□□□□ -0.2
Mrpl39Q9JKF7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl39Q9JKF7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl39Q9JKF7 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl39Q9JKF7 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl39Q9JKF7 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl39Q9JKF7 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl39Q9JKF7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl39Q9JKF7 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl39Q9JKF7 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl39Q9JKF7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl39Q9JKF7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl39Q9JKF7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.81□□□□□ -0.2
Mrpl39Q9JKF7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.81□□□□□ -0.2
Mrpl39Q9JKF7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl39Q9JKF7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl39Q9JKF7 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Mrpl39Q9JKF7 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms