Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Gm13158-201ENSMUST00000122007 736 ntBASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Gm20049-201ENSMUST00000219950 730 ntBASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4bQ9ES00 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4bQ9ES00 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4bQ9ES00 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ube4bQ9ES00 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ube4bQ9ES00 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4bQ9ES00 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ube4bQ9ES00 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4bQ9ES00 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4bQ9ES00 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ube4bQ9ES00 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ube4bQ9ES00 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4bQ9ES00 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4bQ9ES00 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4bQ9ES00 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4bQ9ES00 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ube4bQ9ES00 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4bQ9ES00 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4bQ9ES00 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4bQ9ES00 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4bQ9ES00 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4bQ9ES00 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Ube4bQ9ES00 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Ube4bQ9ES00 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Ube4bQ9ES00 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4bQ9ES00 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4bQ9ES00 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4bQ9ES00 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4bQ9ES00 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4bQ9ES00 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4bQ9ES00 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
Ube4bQ9ES00 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Ube4bQ9ES00 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4bQ9ES00 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4bQ9ES00 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4bQ9ES00 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ube4bQ9ES00 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Ube4bQ9ES00 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4bQ9ES00 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4bQ9ES00 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ube4bQ9ES00 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4bQ9ES00 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4bQ9ES00 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4bQ9ES00 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Ube4bQ9ES00 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4bQ9ES00 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4bQ9ES00 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.37■□□□□ 0.05
Ube4bQ9ES00 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.37■□□□□ 0.05
Ube4bQ9ES00 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4bQ9ES00 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.37■□□□□ 0.05
Ube4bQ9ES00 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4bQ9ES00 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4bQ9ES00 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Ube4bQ9ES00 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4bQ9ES00 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4bQ9ES00 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4bQ9ES00 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4bQ9ES00 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4bQ9ES00 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4bQ9ES00 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.37■□□□□ 0.05
Ube4bQ9ES00 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ube4bQ9ES00 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms