Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne8Q9DC53 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne8Q9DC53 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.68■□□□□ 0.26
Cpne8Q9DC53 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne8Q9DC53 Gm17808-201ENSMUST00000200859 894 ntBASIC16.68■□□□□ 0.26
Cpne8Q9DC53 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.68■□□□□ 0.26
Cpne8Q9DC53 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne8Q9DC53 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne8Q9DC53 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne8Q9DC53 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Cpne8Q9DC53 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne8Q9DC53 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne8Q9DC53 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cpne8Q9DC53 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cpne8Q9DC53 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.68■□□□□ 0.26
Cpne8Q9DC53 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpne8Q9DC53 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne8Q9DC53 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Cpne8Q9DC53 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne8Q9DC53 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne8Q9DC53 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne8Q9DC53 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne8Q9DC53 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne8Q9DC53 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne8Q9DC53 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne8Q9DC53 Gm9013-201ENSMUST00000132939 882 ntBASIC16.67■□□□□ 0.26
Cpne8Q9DC53 Gm29518-201ENSMUST00000190858 372 ntBASIC16.67■□□□□ 0.26
Cpne8Q9DC53 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne8Q9DC53 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.67■□□□□ 0.26
Cpne8Q9DC53 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne8Q9DC53 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne8Q9DC53 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne8Q9DC53 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne8Q9DC53 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne8Q9DC53 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne8Q9DC53 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne8Q9DC53 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne8Q9DC53 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne8Q9DC53 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne8Q9DC53 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne8Q9DC53 Gm15794-201ENSMUST00000120182 631 ntBASIC16.66■□□□□ 0.26
Cpne8Q9DC53 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.66■□□□□ 0.26
Cpne8Q9DC53 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne8Q9DC53 Gm23634-201ENSMUST00000175071 91 ntBASIC16.66■□□□□ 0.26
Cpne8Q9DC53 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.66■□□□□ 0.26
Cpne8Q9DC53 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne8Q9DC53 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne8Q9DC53 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne8Q9DC53 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne8Q9DC53 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne8Q9DC53 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne8Q9DC53 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne8Q9DC53 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne8Q9DC53 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne8Q9DC53 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne8Q9DC53 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne8Q9DC53 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne8Q9DC53 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne8Q9DC53 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.65■□□□□ 0.26
Cpne8Q9DC53 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne8Q9DC53 Gm11950-201ENSMUST00000121615 838 ntBASIC16.65■□□□□ 0.26
Cpne8Q9DC53 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne8Q9DC53 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne8Q9DC53 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Cpne8Q9DC53 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.65■□□□□ 0.26
Cpne8Q9DC53 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.65■□□□□ 0.26
Cpne8Q9DC53 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.65■□□□□ 0.26
Cpne8Q9DC53 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne8Q9DC53 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Cpne8Q9DC53 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne8Q9DC53 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne8Q9DC53 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne8Q9DC53 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne8Q9DC53 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Cpne8Q9DC53 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne8Q9DC53 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cpne8Q9DC53 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.65■□□□□ 0.26
Cpne8Q9DC53 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Cpne8Q9DC53 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne8Q9DC53 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne8Q9DC53 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cpne8Q9DC53 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne8Q9DC53 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne8Q9DC53 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne8Q9DC53 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne8Q9DC53 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne8Q9DC53 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cpne8Q9DC53 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne8Q9DC53 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne8Q9DC53 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne8Q9DC53 Gm6659-201ENSMUST00000174752 547 ntBASIC16.64■□□□□ 0.25
Cpne8Q9DC53 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Cpne8Q9DC53 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne8Q9DC53 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne8Q9DC53 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne8Q9DC53 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne8Q9DC53 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Cpne8Q9DC53 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne8Q9DC53 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne8Q9DC53 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms