Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Gm13216-201ENSMUST00000117145 591 ntBASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rsph9Q9D9V4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rsph9Q9D9V4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rsph9Q9D9V4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rsph9Q9D9V4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rsph9Q9D9V4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rsph9Q9D9V4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Rsph9Q9D9V4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rsph9Q9D9V4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rsph9Q9D9V4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Rsph9Q9D9V4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rsph9Q9D9V4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Rsph9Q9D9V4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rsph9Q9D9V4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rsph9Q9D9V4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rsph9Q9D9V4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Rsph9Q9D9V4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Rsph9Q9D9V4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.63■□□□□ 0.09
Rsph9Q9D9V4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rsph9Q9D9V4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rsph9Q9D9V4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.63■□□□□ 0.09
Rsph9Q9D9V4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rsph9Q9D9V4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rsph9Q9D9V4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 Gm2651-201ENSMUST00000203560 838 ntBASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rsph9Q9D9V4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rsph9Q9D9V4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.61■□□□□ 0.09
Rsph9Q9D9V4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rsph9Q9D9V4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rsph9Q9D9V4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rsph9Q9D9V4 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rsph9Q9D9V4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rsph9Q9D9V4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.61■□□□□ 0.09
Rsph9Q9D9V4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rsph9Q9D9V4 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rsph9Q9D9V4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rsph9Q9D9V4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rsph9Q9D9V4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rsph9Q9D9V4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rsph9Q9D9V4 Gm12497-201ENSMUST00000138778 237 ntBASIC15.61■□□□□ 0.09
Rsph9Q9D9V4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rsph9Q9D9V4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rsph9Q9D9V4 Gm25406-201ENSMUST00000157599 105 ntBASIC15.61■□□□□ 0.09
Rsph9Q9D9V4 Gm9172-201ENSMUST00000212092 954 ntBASIC15.61■□□□□ 0.09
Rsph9Q9D9V4 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.61■□□□□ 0.09
Rsph9Q9D9V4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rsph9Q9D9V4 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rsph9Q9D9V4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rsph9Q9D9V4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms