Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4cQ9D7F7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4cQ9D7F7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Chmp4cQ9D7F7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4cQ9D7F7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4cQ9D7F7 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4cQ9D7F7 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4cQ9D7F7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4cQ9D7F7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4cQ9D7F7 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4cQ9D7F7 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp4cQ9D7F7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Chmp4cQ9D7F7 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.13■□□□□ 0.65
Chmp4cQ9D7F7 Gm22697-201ENSMUST00000175194 63 ntBASIC19.13■□□□□ 0.65
Chmp4cQ9D7F7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Chmp4cQ9D7F7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.13■□□□□ 0.65
Chmp4cQ9D7F7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp4cQ9D7F7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp4cQ9D7F7 Gm9987-201ENSMUST00000069768 567 ntBASIC19.13■□□□□ 0.65
Chmp4cQ9D7F7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Chmp4cQ9D7F7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp4cQ9D7F7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Chmp4cQ9D7F7 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp4cQ9D7F7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp4cQ9D7F7 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4cQ9D7F7 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4cQ9D7F7 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4cQ9D7F7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4cQ9D7F7 Gm6433-201ENSMUST00000118634 875 ntBASIC19.12■□□□□ 0.65
Chmp4cQ9D7F7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.12■□□□□ 0.65
Chmp4cQ9D7F7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Chmp4cQ9D7F7 Gm21559-201ENSMUST00000220638 855 ntBASIC19.12■□□□□ 0.65
Chmp4cQ9D7F7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4cQ9D7F7 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4cQ9D7F7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4cQ9D7F7 Gm8587-201ENSMUST00000076538 843 ntBASIC19.12■□□□□ 0.65
Chmp4cQ9D7F7 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4cQ9D7F7 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4cQ9D7F7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4cQ9D7F7 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4cQ9D7F7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4cQ9D7F7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4cQ9D7F7 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4cQ9D7F7 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4cQ9D7F7 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4cQ9D7F7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp4cQ9D7F7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4cQ9D7F7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Chmp4cQ9D7F7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4cQ9D7F7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
Chmp4cQ9D7F7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Chmp4cQ9D7F7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.11■□□□□ 0.65
Chmp4cQ9D7F7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
Chmp4cQ9D7F7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.11■□□□□ 0.65
Chmp4cQ9D7F7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Chmp4cQ9D7F7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.11■□□□□ 0.65
Chmp4cQ9D7F7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4cQ9D7F7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4cQ9D7F7 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4cQ9D7F7 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4cQ9D7F7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.11■□□□□ 0.65
Chmp4cQ9D7F7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4cQ9D7F7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp4cQ9D7F7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4cQ9D7F7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4cQ9D7F7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4cQ9D7F7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4cQ9D7F7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4cQ9D7F7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.1■□□□□ 0.65
Chmp4cQ9D7F7 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4cQ9D7F7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Chmp4cQ9D7F7 Gm37722-201ENSMUST00000193757 208 ntBASIC19.1■□□□□ 0.65
Chmp4cQ9D7F7 Gm29707-201ENSMUST00000196325 491 ntBASIC19.1■□□□□ 0.65
Chmp4cQ9D7F7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4cQ9D7F7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.1■□□□□ 0.65
Chmp4cQ9D7F7 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.1■□□□□ 0.65
Chmp4cQ9D7F7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Chmp4cQ9D7F7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.1■□□□□ 0.65
Chmp4cQ9D7F7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4cQ9D7F7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4cQ9D7F7 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp4cQ9D7F7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Chmp4cQ9D7F7 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Chmp4cQ9D7F7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp4cQ9D7F7 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp4cQ9D7F7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp4cQ9D7F7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Chmp4cQ9D7F7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp4cQ9D7F7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp4cQ9D7F7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp4cQ9D7F7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp4cQ9D7F7 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.09■□□□□ 0.65
Chmp4cQ9D7F7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp4cQ9D7F7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Chmp4cQ9D7F7 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp4cQ9D7F7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Chmp4cQ9D7F7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp4cQ9D7F7 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp4cQ9D7F7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp4cQ9D7F7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms