Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rtl8cQ9D6I0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rtl8cQ9D6I0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Mir6404-201ENSMUST00000183699 94 ntBASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtl8cQ9D6I0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 AA414768-201ENSMUST00000121924 1257 ntBASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtl8cQ9D6I0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtl8cQ9D6I0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rtl8cQ9D6I0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtl8cQ9D6I0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtl8cQ9D6I0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtl8cQ9D6I0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtl8cQ9D6I0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtl8cQ9D6I0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rtl8cQ9D6I0 Gm13836-201ENSMUST00000121159 501 ntBASIC14.28□□□□□ -0.12
Rtl8cQ9D6I0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Rtl8cQ9D6I0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Rtl8cQ9D6I0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtl8cQ9D6I0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.28□□□□□ -0.12
Rtl8cQ9D6I0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.28□□□□□ -0.12
Rtl8cQ9D6I0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtl8cQ9D6I0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtl8cQ9D6I0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Rtl8cQ9D6I0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtl8cQ9D6I0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.28□□□□□ -0.12
Rtl8cQ9D6I0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rtl8cQ9D6I0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rtl8cQ9D6I0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.27□□□□□ -0.12
Rtl8cQ9D6I0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rtl8cQ9D6I0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rtl8cQ9D6I0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rtl8cQ9D6I0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Rtl8cQ9D6I0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Rtl8cQ9D6I0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtl8cQ9D6I0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rtl8cQ9D6I0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtl8cQ9D6I0 Gm6659-201ENSMUST00000174752 547 ntBASIC14.27□□□□□ -0.13
Rtl8cQ9D6I0 Gm23634-201ENSMUST00000175071 91 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms