Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc7Q9D541 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.66■□□□□ 0.58
Ccdc7Q9D541 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.65■□□□□ 0.58
Ccdc7Q9D541 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc7Q9D541 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc7Q9D541 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc7Q9D541 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc7Q9D541 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc7Q9D541 Gm6623-201ENSMUST00000173570 544 ntBASIC18.65■□□□□ 0.58
Ccdc7Q9D541 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.65■□□□□ 0.58
Ccdc7Q9D541 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc7Q9D541 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc7Q9D541 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc7Q9D541 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Ccdc7Q9D541 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc7Q9D541 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc7Q9D541 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc7Q9D541 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc7Q9D541 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc7Q9D541 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ccdc7Q9D541 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc7Q9D541 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc7Q9D541 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Ccdc7Q9D541 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc7Q9D541 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.64■□□□□ 0.57
Ccdc7Q9D541 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms