Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Phf7-203ENSMUST00000226565 1971 ntBASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Chaf1bQ9D0N7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Chaf1bQ9D0N7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.05■□□□□ 0
Chaf1bQ9D0N7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chaf1bQ9D0N7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chaf1bQ9D0N7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.05■□□□□ 0
Chaf1bQ9D0N7 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chaf1bQ9D0N7 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Chaf1bQ9D0N7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Chaf1bQ9D0N7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ 0
Chaf1bQ9D0N7 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Chaf1bQ9D0N7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Chaf1bQ9D0N7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chaf1bQ9D0N7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chaf1bQ9D0N7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chaf1bQ9D0N7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.05■□□□□ -0
Chaf1bQ9D0N7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chaf1bQ9D0N7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.05■□□□□ -0
Chaf1bQ9D0N7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chaf1bQ9D0N7 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Chaf1bQ9D0N7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chaf1bQ9D0N7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chaf1bQ9D0N7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Chaf1bQ9D0N7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.05■□□□□ -0
Chaf1bQ9D0N7 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Chaf1bQ9D0N7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chaf1bQ9D0N7 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chaf1bQ9D0N7 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.05■□□□□ -0
Chaf1bQ9D0N7 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chaf1bQ9D0N7 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Chaf1bQ9D0N7 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chaf1bQ9D0N7 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chaf1bQ9D0N7 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chaf1bQ9D0N7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.04■□□□□ -0
Chaf1bQ9D0N7 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chaf1bQ9D0N7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chaf1bQ9D0N7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chaf1bQ9D0N7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chaf1bQ9D0N7 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chaf1bQ9D0N7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.04■□□□□ -0
Chaf1bQ9D0N7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chaf1bQ9D0N7 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.04■□□□□ -0
Chaf1bQ9D0N7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Chaf1bQ9D0N7 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Chaf1bQ9D0N7 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.04■□□□□ -0
Chaf1bQ9D0N7 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chaf1bQ9D0N7 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chaf1bQ9D0N7 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chaf1bQ9D0N7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chaf1bQ9D0N7 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Mir1199-201ENSMUST00000117015 119 ntBASIC15.03■□□□□ -0
Chaf1bQ9D0N7 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Chaf1bQ9D0N7 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chaf1bQ9D0N7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chaf1bQ9D0N7 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms