Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Lysmd1Q9D0E3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Lysmd1Q9D0E3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lysmd1Q9D0E3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17■□□□□ 0.31
Lysmd1Q9D0E3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lysmd1Q9D0E3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd1Q9D0E3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd1Q9D0E3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd1Q9D0E3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd1Q9D0E3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd1Q9D0E3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd1Q9D0E3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd1Q9D0E3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.99■□□□□ 0.31
Lysmd1Q9D0E3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC16.99■□□□□ 0.31
Lysmd1Q9D0E3 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd1Q9D0E3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.99■□□□□ 0.31
Lysmd1Q9D0E3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.99■□□□□ 0.31
Lysmd1Q9D0E3 Gm27892-201ENSMUST00000185017 106 ntBASIC16.99■□□□□ 0.31
Lysmd1Q9D0E3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd1Q9D0E3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd1Q9D0E3 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd1Q9D0E3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd1Q9D0E3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd1Q9D0E3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd1Q9D0E3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Lysmd1Q9D0E3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd1Q9D0E3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Gm2810-201ENSMUST00000118681 990 ntBASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Gm11918-201ENSMUST00000121660 179 ntBASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Mir1982-201ENSMUST00000157368 74 ntBASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Gm45668-201ENSMUST00000211271 493 ntBASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Olfr582-201ENSMUST00000098212 960 ntBASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lysmd1Q9D0E3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Gm14042-201ENSMUST00000120139 833 ntBASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Gm29667-201ENSMUST00000190817 490 ntBASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Gm38225-201ENSMUST00000194001 393 ntBASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Gm4959-201ENSMUST00000197271 1044 ntBASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Gm15823-201ENSMUST00000064305 670 ntBASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lysmd1Q9D0E3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Lysmd1Q9D0E3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.96■□□□□ 0.31
Lysmd1Q9D0E3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Lysmd1Q9D0E3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Lysmd1Q9D0E3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Lysmd1Q9D0E3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.96■□□□□ 0.31
Lysmd1Q9D0E3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.96■□□□□ 0.31
Lysmd1Q9D0E3 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.96■□□□□ 0.31
Lysmd1Q9D0E3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lysmd1Q9D0E3 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lysmd1Q9D0E3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.96■□□□□ 0.31
Lysmd1Q9D0E3 Gm10154-201ENSMUST00000084445 354 ntBASIC16.96■□□□□ 0.31
Lysmd1Q9D0E3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.96■□□□□ 0.31
Lysmd1Q9D0E3 Gm9200-201ENSMUST00000118513 1354 ntBASIC16.96■□□□□ 0.31
Lysmd1Q9D0E3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lysmd1Q9D0E3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lysmd1Q9D0E3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lysmd1Q9D0E3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lysmd1Q9D0E3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms