Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssbp3Q9D032 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.3□□□□□ -0.28
Ssbp3Q9D032 Gm28659-201ENSMUST00000188013 759 ntBASIC13.3□□□□□ -0.28
Ssbp3Q9D032 Gm7461-201ENSMUST00000058918 827 ntBASIC13.3□□□□□ -0.28
Ssbp3Q9D032 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ssbp3Q9D032 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ssbp3Q9D032 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssbp3Q9D032 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ssbp3Q9D032 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssbp3Q9D032 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.3□□□□□ -0.28
Ssbp3Q9D032 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssbp3Q9D032 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssbp3Q9D032 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssbp3Q9D032 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssbp3Q9D032 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssbp3Q9D032 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ssbp3Q9D032 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssbp3Q9D032 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Mir8098-201ENSMUST00000184011 137 ntBASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssbp3Q9D032 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.28□□□□□ -0.28
Ssbp3Q9D032 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ssbp3Q9D032 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssbp3Q9D032 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssbp3Q9D032 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssbp3Q9D032 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssbp3Q9D032 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ssbp3Q9D032 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssbp3Q9D032 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssbp3Q9D032 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssbp3Q9D032 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ssbp3Q9D032 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Ssbp3Q9D032 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.28□□□□□ -0.28
Ssbp3Q9D032 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.28□□□□□ -0.28
Ssbp3Q9D032 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.28□□□□□ -0.28
Ssbp3Q9D032 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ssbp3Q9D032 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssbp3Q9D032 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Ssbp3Q9D032 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssbp3Q9D032 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.28□□□□□ -0.28
Ssbp3Q9D032 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ssbp3Q9D032 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssbp3Q9D032 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ssbp3Q9D032 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ssbp3Q9D032 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ssbp3Q9D032 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Ssbp3Q9D032 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ssbp3Q9D032 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Ssbp3Q9D032 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.27□□□□□ -0.28
Ssbp3Q9D032 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.27□□□□□ -0.29
Ssbp3Q9D032 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.27□□□□□ -0.29
Ssbp3Q9D032 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Ssbp3Q9D032 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.27□□□□□ -0.29
Ssbp3Q9D032 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.27□□□□□ -0.29
Ssbp3Q9D032 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssbp3Q9D032 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Ssbp3Q9D032 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.27□□□□□ -0.29
Ssbp3Q9D032 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssbp3Q9D032 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssbp3Q9D032 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssbp3Q9D032 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Ssbp3Q9D032 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ssbp3Q9D032 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssbp3Q9D032 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Ssbp3Q9D032 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms