Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1lQ9CXF7 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1lQ9CXF7 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1lQ9CXF7 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1lQ9CXF7 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1lQ9CXF7 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1lQ9CXF7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1lQ9CXF7 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1lQ9CXF7 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Gm10602-201ENSMUST00000098239 609 ntBASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1lQ9CXF7 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chd1lQ9CXF7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Chd1lQ9CXF7 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chd1lQ9CXF7 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chd1lQ9CXF7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chd1lQ9CXF7 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Chd1lQ9CXF7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Chd1lQ9CXF7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chd1lQ9CXF7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chd1lQ9CXF7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Chd1lQ9CXF7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd1lQ9CXF7 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd1lQ9CXF7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.08■□□□□ 0.48
Chd1lQ9CXF7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.08■□□□□ 0.48
Chd1lQ9CXF7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd1lQ9CXF7 Gm37856-201ENSMUST00000191634 999 ntBASIC18.08■□□□□ 0.48
Chd1lQ9CXF7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.08■□□□□ 0.48
Chd1lQ9CXF7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Chd1lQ9CXF7 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.08■□□□□ 0.48
Chd1lQ9CXF7 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd1lQ9CXF7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd1lQ9CXF7 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Chd1lQ9CXF7 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd1lQ9CXF7 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.08■□□□□ 0.48
Chd1lQ9CXF7 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd1lQ9CXF7 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd1lQ9CXF7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd1lQ9CXF7 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 Gm44450-201ENSMUST00000199528 114 ntBASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1lQ9CXF7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Chd1lQ9CXF7 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1lQ9CXF7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1lQ9CXF7 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1lQ9CXF7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1lQ9CXF7 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1lQ9CXF7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1lQ9CXF7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1lQ9CXF7 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1lQ9CXF7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms