Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc3Q9CW03 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smc3Q9CW03 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smc3Q9CW03 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc3Q9CW03 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc3Q9CW03 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc3Q9CW03 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc3Q9CW03 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.8■□□□□ 0.6
Smc3Q9CW03 Gm27389-201ENSMUST00000183622 195 ntBASIC18.8■□□□□ 0.6
Smc3Q9CW03 Gm37722-201ENSMUST00000193757 208 ntBASIC18.8■□□□□ 0.6
Smc3Q9CW03 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc3Q9CW03 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.8■□□□□ 0.6
Smc3Q9CW03 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc3Q9CW03 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc3Q9CW03 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc3Q9CW03 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc3Q9CW03 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc3Q9CW03 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smc3Q9CW03 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc3Q9CW03 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc3Q9CW03 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc3Q9CW03 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc3Q9CW03 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc3Q9CW03 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc3Q9CW03 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc3Q9CW03 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc3Q9CW03 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.79■□□□□ 0.6
Smc3Q9CW03 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.79■□□□□ 0.6
Smc3Q9CW03 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc3Q9CW03 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc3Q9CW03 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc3Q9CW03 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc3Q9CW03 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc3Q9CW03 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Smc3Q9CW03 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc3Q9CW03 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc3Q9CW03 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smc3Q9CW03 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc3Q9CW03 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smc3Q9CW03 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smc3Q9CW03 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc3Q9CW03 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc3Q9CW03 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc3Q9CW03 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc3Q9CW03 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc3Q9CW03 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc3Q9CW03 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc3Q9CW03 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc3Q9CW03 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.78■□□□□ 0.6
Smc3Q9CW03 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc3Q9CW03 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.78■□□□□ 0.6
Smc3Q9CW03 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smc3Q9CW03 Gm21559-201ENSMUST00000220638 855 ntBASIC18.78■□□□□ 0.6
Smc3Q9CW03 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc3Q9CW03 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc3Q9CW03 Gm8587-201ENSMUST00000076538 843 ntBASIC18.78■□□□□ 0.6
Smc3Q9CW03 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc3Q9CW03 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.78■□□□□ 0.6
Smc3Q9CW03 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smc3Q9CW03 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc3Q9CW03 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc3Q9CW03 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc3Q9CW03 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smc3Q9CW03 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc3Q9CW03 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc3Q9CW03 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc3Q9CW03 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.77■□□□□ 0.6
Smc3Q9CW03 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc3Q9CW03 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.77■□□□□ 0.6
Smc3Q9CW03 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc3Q9CW03 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc3Q9CW03 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Smc3Q9CW03 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.77■□□□□ 0.6
Smc3Q9CW03 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Smc3Q9CW03 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.77■□□□□ 0.6
Smc3Q9CW03 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.77■□□□□ 0.6
Smc3Q9CW03 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc3Q9CW03 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc3Q9CW03 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Smc3Q9CW03 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Smc3Q9CW03 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smc3Q9CW03 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc3Q9CW03 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc3Q9CW03 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smc3Q9CW03 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc3Q9CW03 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.77■□□□□ 0.59
Smc3Q9CW03 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smc3Q9CW03 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smc3Q9CW03 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.77■□□□□ 0.59
Smc3Q9CW03 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Smc3Q9CW03 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc3Q9CW03 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc3Q9CW03 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc3Q9CW03 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc3Q9CW03 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.76■□□□□ 0.59
Smc3Q9CW03 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Smc3Q9CW03 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc3Q9CW03 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Smc3Q9CW03 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc3Q9CW03 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms