Protein–RNA interactions for Protein: Q9CVD2

Atxn3, Ataxin-3, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn3Q9CVD2 App-207ENSMUST00000227737 2827 ntBASIC20.54■□□□□ 0.88
Atxn3Q9CVD2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atxn3Q9CVD2 Gm42473-201ENSMUST00000201056 2291 ntBASIC20.53■□□□□ 0.88
Atxn3Q9CVD2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atxn3Q9CVD2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Atxn3Q9CVD2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atxn3Q9CVD2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atxn3Q9CVD2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atxn3Q9CVD2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atxn3Q9CVD2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC20.53■□□□□ 0.88
Atxn3Q9CVD2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atxn3Q9CVD2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atxn3Q9CVD2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atxn3Q9CVD2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Atxn3Q9CVD2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Atxn3Q9CVD2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.53■□□□□ 0.88
Atxn3Q9CVD2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atxn3Q9CVD2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atxn3Q9CVD2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Atxn3Q9CVD2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atxn3Q9CVD2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atxn3Q9CVD2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC20.53■□□□□ 0.88
Atxn3Q9CVD2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atxn3Q9CVD2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atxn3Q9CVD2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 Grk6-207ENSMUST00000225925 2769 ntBASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atxn3Q9CVD2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
Atxn3Q9CVD2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Atxn3Q9CVD2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Atxn3Q9CVD2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Atxn3Q9CVD2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Atxn3Q9CVD2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Atxn3Q9CVD2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Atxn3Q9CVD2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atxn3Q9CVD2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atxn3Q9CVD2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atxn3Q9CVD2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Atxn3Q9CVD2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atxn3Q9CVD2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atxn3Q9CVD2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atxn3Q9CVD2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atxn3Q9CVD2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atxn3Q9CVD2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atxn3Q9CVD2 Gm27741-201ENSMUST00000185060 237 ntBASIC20.51■□□□□ 0.87
Atxn3Q9CVD2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.51■□□□□ 0.87
Atxn3Q9CVD2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atxn3Q9CVD2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Atxn3Q9CVD2 Gm8784-201ENSMUST00000222096 1435 ntBASIC20.51■□□□□ 0.87
Atxn3Q9CVD2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atxn3Q9CVD2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atxn3Q9CVD2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atxn3Q9CVD2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atxn3Q9CVD2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC20.5■□□□□ 0.87
Atxn3Q9CVD2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atxn3Q9CVD2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atxn3Q9CVD2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atxn3Q9CVD2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20.5■□□□□ 0.87
Atxn3Q9CVD2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atxn3Q9CVD2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atxn3Q9CVD2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC20.5■□□□□ 0.87
Atxn3Q9CVD2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atxn3Q9CVD2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Atxn3Q9CVD2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Atxn3Q9CVD2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atxn3Q9CVD2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Atxn3Q9CVD2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atxn3Q9CVD2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atxn3Q9CVD2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atxn3Q9CVD2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.49■□□□□ 0.87
Atxn3Q9CVD2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atxn3Q9CVD2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Atxn3Q9CVD2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC20.49■□□□□ 0.87
Atxn3Q9CVD2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atxn3Q9CVD2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atxn3Q9CVD2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atxn3Q9CVD2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.49■□□□□ 0.87
Atxn3Q9CVD2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atxn3Q9CVD2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms