Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Mir6990-201ENSMUST00000183724 91 ntBASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cldnd1Q9CQX5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 Gm43474-201ENSMUST00000196415 774 ntBASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.29■□□□□ 0.2
Cldnd1Q9CQX5 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldnd1Q9CQX5 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cldnd1Q9CQX5 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldnd1Q9CQX5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldnd1Q9CQX5 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cldnd1Q9CQX5 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cldnd1Q9CQX5 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Cldnd1Q9CQX5 Gm5745-201ENSMUST00000183748 313 ntBASIC16.28■□□□□ 0.2
Cldnd1Q9CQX5 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cldnd1Q9CQX5 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldnd1Q9CQX5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Cldnd1Q9CQX5 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Cldnd1Q9CQX5 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldnd1Q9CQX5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.28■□□□□ 0.2
Cldnd1Q9CQX5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldnd1Q9CQX5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldnd1Q9CQX5 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldnd1Q9CQX5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldnd1Q9CQX5 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldnd1Q9CQX5 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldnd1Q9CQX5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldnd1Q9CQX5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldnd1Q9CQX5 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.27■□□□□ 0.2
Cldnd1Q9CQX5 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Cldnd1Q9CQX5 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cldnd1Q9CQX5 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.27■□□□□ 0.2
Cldnd1Q9CQX5 Rprl2-201ENSMUST00000157150 290 ntBASIC16.27■□□□□ 0.2
Cldnd1Q9CQX5 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.27■□□□□ 0.2
Cldnd1Q9CQX5 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.27■□□□□ 0.2
Cldnd1Q9CQX5 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldnd1Q9CQX5 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldnd1Q9CQX5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldnd1Q9CQX5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms