Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chchd1Q9CQA6 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chchd1Q9CQA6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chchd1Q9CQA6 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chchd1Q9CQA6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chchd1Q9CQA6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chchd1Q9CQA6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chchd1Q9CQA6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Chchd1Q9CQA6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Gm12134-201ENSMUST00000122109 520 ntBASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Gm5812-201ENSMUST00000061073 957 ntBASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Chchd1Q9CQA6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chchd1Q9CQA6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Chchd1Q9CQA6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.11□□□□□ -0.47
Chchd1Q9CQA6 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.11□□□□□ -0.47
Chchd1Q9CQA6 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chchd1Q9CQA6 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.11□□□□□ -0.47
Chchd1Q9CQA6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chchd1Q9CQA6 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chchd1Q9CQA6 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chchd1Q9CQA6 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chchd1Q9CQA6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chchd1Q9CQA6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Chchd1Q9CQA6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chchd1Q9CQA6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC12.11□□□□□ -0.47
Chchd1Q9CQA6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC12.11□□□□□ -0.47
Chchd1Q9CQA6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC12.11□□□□□ -0.47
Chchd1Q9CQA6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Chchd1Q9CQA6 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chchd1Q9CQA6 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Chchd1Q9CQA6 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chchd1Q9CQA6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chchd1Q9CQA6 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chchd1Q9CQA6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chchd1Q9CQA6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chchd1Q9CQA6 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms